Busch Lab

ZMP

si:dkey-30j22.9

Ensembl ID:
ENSDARG00000070052
ZFIN ID:
ZDB-GENE-041001-210
Description:
Novel protein [Source:UniProtKB/TrEMBL;Acc:Q5RHL8]
Human Orthologue:
TDRD6
Human Description:
tudor domain containing 6 [Source:HGNC Symbol;Acc:21339]
Mouse Orthologue:
Tdrd6
Mouse Description:
tudor domain containing 6 Gene [Source:MGI Symbol;Acc:MGI:2679727]

Alleles

There are 5 alleles of this gene:

Allele Name Consequence Status Availability
sa9787 Nonsense Available for shipment Available now
sa43494 Nonsense Mutation detected in F1 DNA Not yet available
sa3060 Nonsense F2 line generated Not yet available
sa23764 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa9787
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > G
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000102504 Nonsense 266 1281 1 3
ENSDART00000124497 Nonsense 281 1623 1 2
ENSDART00000141627 None None 337 None 8
Genomic Location (Zv9):
Chromosome 20 (position 35470906)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 35543419
GRCz11 20 35446298
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AAGGTTTTCTCTCAGGAGCTGAAAAAGTTGACTGAACAGATCACTCAGTA[T/G]TACGAGGGAAGAGTAGGAAGYTATTTTGCAAGAGCTGAGARTTTGGGCAG
Long Flanking Sequence:
AGTGACTTTTTCTATCTTCCTCCTGAAGTTGAATTCTGCATTCTTGCCAATGCCTTACCACTATCTCCTGAAAACAATTGGTCCTCAATGGCCTTAGAGTTTATGAAGACCTTCTGTGGTCGAAGAGTCAATGCCACCGTTCAAGATGTTCTTGTAGCTCATCGAACATTCCTTCTTGACATTCCTTGTCTGTCAAGGCAGATGTTTGAAATGGGCTTTGCAAAGAAATTGTACAGTGATCAGTTCATGGAGTTTGTTGTGAGATCTTTGCAGGCCAGCACCGGAACTAGCGATCTTAAGAGAATTTCCTCCATTAGAACCAAACCAGTTGAGATCATTGAGCAAAAGGAAAAGCAGCAGGCCTACATGTTTCCTGAGCTGCAGACCGATACTGTAGAGACTGTTGTTATCACTGAGGTAACAAGTCCATTTCGAATATTCTGTCAGCTTAAGGTTTTCTCTCAGGAGCTGAAAAAGTTGACTGAACAGATCACTCAGTA[T/G]TACGAGGGAAGAGTAGGAAGCTATTTTGCAAGAGCTGAGAATTTGGGCAGCCCATGTGCATCAAGAGGAAGTGATGGCAAATGGTATCGTTCTGTGCTGCAGCAAGTCATGTCTGCAAACAATGTGGTTGAGGTTTTGCATGTGGATTATGGGAAGAAACAATTTGTACAAGTTGAGAATGTCAAGCCACTTGCCTCTGAATTCTTCAGAATGCCGGTTGTAACATATGTTTGCTCTCTGCATGGAATTGTTGACAAAGGTGTTGGTTGGACTGCTTCACAGATTGACTACCTGAAATCTCTGTTGCTCAATCGCACAGTGATTGCCAAGTTTCAGTATCAAAGCCTTTCTGAGGGTGTCCACTATGTAACACTTTATGGAGAGGAGAACACAAACATAAACAAATTGTTTGAACTGAAACCAAAATGTTCACTGGACTCTGACATGACTCTTGCAGATTTCGCTGTTCAGAAGAGCCCATCATCTCAGAAGAGCAAGAT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa43494
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000102504 Nonsense 281 1281 1 3
ENSDART00000124497 Nonsense 296 1623 1 2
ENSDART00000141627 None None 337 None 8
Genomic Location (Zv9):
Chromosome 20 (position 35470950)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 35543463
GRCz11 20 35446342
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCAGTATTACGAGGGAAGAGTAGGAAGCTATTTTGCAAGAGCTGAGAATT[T/A]GGGCAGCCCATGTGCATCAAGAGGAAGTGATGGCAAATGGTATCGTTCTG
Long Flanking Sequence:
TGCCAATGCCTTACCACTATCTCCTGAAAACAATTGGTCCTCAATGGCCTTAGAGTTTATGAAGACCTTCTGTGGTCGAAGAGTCAATGCCACCGTTCAAGATGTTCTTGTAGCTCATCGAACATTCCTTCTTGACATTCCTTGTCTGTCAAGGCAGATGTTTGAAATGGGCTTTGCAAAGAAATTGTACAGTGATCAGTTCATGGAGTTTGTTGTGAGATCTTTGCAGGCCAGCACCGGAACTAGCGATCTTAAGAGAATTTCCTCCATTAGAACCAAACCAGTTGAGATCATTGAGCAAAAGGAAAAGCAGCAGGCCTACATGTTTCCTGAGCTGCAGACCGATACTGTAGAGACTGTTGTTATCACTGAGGTAACAAGTCCATTTCGAATATTCTGTCAGCTTAAGGTTTTCTCTCAGGAGCTGAAAAAGTTGACTGAACAGATCACTCAGTATTACGAGGGAAGAGTAGGAAGCTATTTTGCAAGAGCTGAGAATT[T/A]GGGCAGCCCATGTGCATCAAGAGGAAGTGATGGCAAATGGTATCGTTCTGTGCTGCAGCAAGTCATGTCTGCAAACAATGTGGTTGAGGTTTTGCATGTGGATTATGGGAAGAAACAATTTGTACAAGTTGAGAATGTCAAGCCACTTGCCTCTGAATTCTTCAGAATGCCGGTTGTAACATATGTTTGCTCTCTGCATGGAATTGTTGACAAAGGTGTTGGTTGGACTGCTTCACAGATTGACTACCTGAAATCTCTGTTGCTCAATCGCACAGTGATTGCCAAGTTTCAGTATCAAAGCCTTTCTGAGGGTGTCCACTATGTAACACTTTATGGAGAGGAGAACACAAACATAAACAAATTGTTTGAACTGAAACCAAAATGTTCACTGGACTCTGACATGACTCTTGCAGATTTCGCTGTTCAGAAGAGCCCATCATCTCAGAAGAGCAAGATTTCAAGGACAACCGAGAGCACACACATTAACGAGACCTACTCTG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa3060
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000102504 Nonsense 380 1281 1 3
ENSDART00000124497 Nonsense 395 1623 1 2
ENSDART00000141627 None None 337 None 8
Genomic Location (Zv9):
Chromosome 20 (position 35471246)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 35543759
GRCz11 20 35446638
KASP Assay ID:
554-2708.1 (used for ordering genotyping assays)
KASP Sequence:
ACCTGAAATCTCTGTTGCTCAATCGCACAGTGATTGCCAAGTTTCAGTAT[C/T]AAAGCCTTTCTGAGGGTGTCCACTATGTAACACTTTATGGAGAGGAGAAC
Long Flanking Sequence:
AGCAAAAGGAAAAGCAGCAGGCCTACATGTTTCCTGAGCTGCAGACCGATACTGTAGAGACTGTTGTTATCACTGAGGTAACAAGTCCATTTCGAATATTCTGTCAGCTTAAGGTTTTCTCTCAGGAGCTGAAAAAGTTGACTGAACAGATCACTCAGTATTACGAGGGAAGAGTAGGAAGCTATTTTGCAAGAGCTGAGAATTTGGGCAGCCCATGTGCATCAAGAGGAAGTGATGGCAAATGGTATCGTTCTGTGCTGCAGCAAGTCATGTCTGCAAACAATGTGGTTGAGGTTTTGCATGTGGATTATGGGAAGAAACAATTTGTACAAGTTGAGAATGTCAAGCCACTTGCCTCTGAATTCTTCAGAATGCCGGTTGTAACATATGTTTGCTCTCTGCATGGAATTGTTGACAAAGGTGTTGGTTGGACTGCTTCACAGATTGACTACCTGAAATCTCTGTTGCTCAATCGCACAGTGATTGCCAAGTTTCAGTAT[C/T]AAAGCCTTTCTGAGGGTGTCCACTATGTAACACTTTATGGAGAGGAGAACACAAACATAAACAAATTGTTTGAACTGAAACCAAAATGTTCACTGGACTCTGACATGACTCTTGCAGATTTCGCTGTTCAGAAGAGCCCATCATCTCAGAAGAGCAAGATTTCAAGGACAACCGAGAGCACACACATTAACGAGACCTACTCTGACCTTAAAGTGAACAAACCTGTCTTTTTCACAGAAACTCTCACACCTAACTCTACACACATGGCTGTTGTGCAGCATGTTGACAGCCCTGGAAAGTTTTGGATTCAAACACAGCGTTATGCTGATGAGTTCGATCTGCTAATGAATGGCCTTGGAAATCTGTACAGTGATCCAACAAGCACTGAATCATTGATTAGAAAGCCTGTTGTTGGTCTCATCTGTGCAGCTAAAGCACAAGATGGTGTGTTCTACAGAGCGGCTGTCTATAAGGTGATTGACAAGACAGCAGAAGTTTAC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa23764
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000102504 Nonsense 546 1281 2 3
ENSDART00000124497 Nonsense 567 1623 2 2
ENSDART00000141627 None None 337 None 8
Genomic Location (Zv9):
Chromosome 20 (position 35471792)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 35544305
GRCz11 20 35447184
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTTACTTCCTCGACTATGGCAACACAGAAGTTGTTGATAGTTTTAACCTT[C/T]GACAGCTGCCTTTAAGATTCCAGCAGCTACCAGCTGTGGCAGTAAAATGC
Long Flanking Sequence:
AGAACACAAACATAAACAAATTGTTTGAACTGAAACCAAAATGTTCACTGGACTCTGACATGACTCTTGCAGATTTCGCTGTTCAGAAGAGCCCATCATCTCAGAAGAGCAAGATTTCAAGGACAACCGAGAGCACACACATTAACGAGACCTACTCTGACCTTAAAGTGAACAAACCTGTCTTTTTCACAGAAACTCTCACACCTAACTCTACACACATGGCTGTTGTGCAGCATGTTGACAGCCCTGGAAAGTTTTGGATTCAAACACAGCGTTATGCTGATGAGTTCGATCTGCTAATGAATGGCCTTGGAAATCTGTACAGTGATCCAACAAGCACTGAATCATTGATTAGAAAGCCTGTTGTTGGTCTCATCTGTGCAGCTAAAGCACAAGATGGTGTGTTCTACAGAGCGGCTGTCTATAAGGTGATTGACAAGACAGCAGAAGTTTACTTCCTCGACTATGGCAACACAGAAGTTGTTGATAGTTTTAACCTT[C/T]GACAGCTGCCTTTAAGATTCCAGCAGCTACCAGCTGTGGCAGTAAAATGCTCTTTACATGGTGTTAAACCCAGATTGAAACTCTGGGAGGAGAGAGCTACGTTGTTCTTTTCAAAACTTGTCAGAGACAGAATCATTGATTTGCATGTACAGGACAAACAACAAGACACTCACATTGTTCAGTTGGTGGACCCAAGTTTGGATGGAGAAAAGGATGTGAGCAAGTTATTGTGCAATGCAGGTTTTGCTGTAAGTGAAAAGAGCATTGTGGATTATTCAGCTACAAGATCTTGTGGTTTGAAAACCACCCATGCATCTGGCGTATTCTTGACAGGCACTCAACCCCAAACACCTTGCAGTTCTTCTGTTGTAATGGACAGTGCATCTGCTTTCAAGGAGTACTTGTTTCCAATTGGAAGTTCACTGGAAGTAACTGTGTCCTACATTGAGAATCCAAATGACTTCTGGTGTCAAAAGGCCAGAAATGCAGCATGCTTAGAA
Associated Phenotype:
Not determined