ZMP
hmcn1
Ensembl ID:
ZFIN ID:
Description:
hemicentin 1 [Source:RefSeq peptide;Acc:NP_001177233]
Human Orthologue:
HMCN1
Human Description:
hemicentin 1 [Source:HGNC Symbol;Acc:19194]
Mouse Orthologue:
Hmcn1
Mouse Description:
hemicentin 1 Gene [Source:MGI Symbol;Acc:MGI:2685047]
Alleles
There are 23 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa9806 | Essential Splice Site | Available for shipment | Available now |
sa23757 | Nonsense | Available for shipment | Available now |
sa32307 | Nonsense | Available for shipment | Available now |
sa16438 | Nonsense | Available for shipment | Available now |
sa17994 | Nonsense | Available for shipment | Available now |
sa11019 | Essential Splice Site | Available for shipment | Available now |
sa23756 | Essential Splice Site | Available for shipment | Available now |
sa32306 | Essential Splice Site | Available for shipment | Available now |
Mutation Details
Allele Name:
sa9806
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000020389 | Essential Splice Site | 1164 | 5616 | 24 | 107 |
ENSDART00000144705 | Essential Splice Site | 1081 | 5534 | 23 | 106 |
ENSDART00000148185 | None | None | 289 | None | 5 |
Genomic Location (Zv9):
Chromosome 20 (position 34244512)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 20 | 34317025 |
GRCz11 | 20 | 34219904 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TGTTTTCRGCTTTCKCAMTTTTATTAATACTCCTTTCTCTTTWTTTTGCA[G/A]TTCSTCCCAGCATCMGTGCAGGTCCCCGAGCCATRAAAGTGCAGATCGGT
Long Flanking Sequence:
CGTGATGTTGGAGAGATCAGCTTTGCCTCAGCTGCTCTGAGCAAAATGTGATAATAATTATAGAGTCTTATAAACACAAGAGCACATGCAGACACATCTGTAAGTGAAGTTATTTATAATGACTACAATTAAACCCTTAGTCGTTTTAATCTTGGATTATAGTTTTCCATAAGACTCAGACGCAGATGCTTCGGCAGTCTGAGAAATGAGAGCTACAGCAAAGCGGGAATGTGCTGTTTGATTTATCACAGCTACCAAATGTCTCATCAGGAAGATTAACATCCAGAAAAAAAGATGTGAGAACATCATCTATAACCTCCGAGGGCGAATAAGGACAGGTTGCTGTTTCTGTGCACAGCCGATGCTTTATGAGCAACAAATCAAACCTAATGACGTGCTATGAAAGAATGCGTTACTACCACATATGTTTAACACTTATGCAAGAGCACATGTTTTCAGCTTTCTCACTTTTATTAATACTCCTTTCTCTTTTTTTTGCA[G/A]TTCCTCCCAGCATCAGTGCAGGTCCCCGAGCCATGAAAGTGCAGATCGGTCACGCCATAGACCTGCCCTGTGTCACACAGGGAGTCCCAGAGCCCTCGGTGTCCTGGCTAAAGGATGGTACTGTTCTGCAGGACGGGTCTCGGTACAGGATCTCAGATGGAGCTCTGACTCTAAACCAGGTGGCGCTTACAGATGAAGGCATCTATGTCTGCAGGGCCGTCAACATTGCTGGAAAAGAAGAAACTGCTATTCAACTACATGTGCAGGGTTAGATGTTAAATGTTGACATCTACAACTGTGCTTTTTAGCTTTAAGTAGACTTTAAATCCAACGCATTGCCTTTTGCTCCTTACAGTCCCTCCTGTCGTAGAGGTTTCTGAGCCCCCTTTCAACAGCCCCTTACAGGAGAGAGTGGCTAACCAGCAGATCGCCTTCCCCTGTCCTGCCAAAGGTGAACCTGCACTTTGAGAAATCCAACTTTTTTTTTTTTTGGTTTAGCA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa23757
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000020389 | Nonsense | 1608 | 5616 | 31 | 107 |
ENSDART00000144705 | Nonsense | 1525 | 5534 | 30 | 106 |
ENSDART00000148185 | None | None | 289 | None | 5 |
Genomic Location (Zv9):
Chromosome 20 (position 34237266)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 20 | 34309779 |
GRCz11 | 20 | 34212658 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACCGAGGGCAGTTCCTCAAGATCTTAAGAGCTCAAGTTTCTGATGCTGGA[C/T]AGTACACATGTAGAGTCACCAGTGTGGCTGGCACTGCTGAAAAAGTTGTC
Long Flanking Sequence:
TTAGTGTAATCTGTCTCCTTTTCACTGTGTGTTTTAGGCCAGTGTTTCTGGGTGACCCCAACATTGAAGTTTTAAACAGAGGACAGCAGTTGAAGATAAAGAGCGCTCGCTTGGGGGACCAGGCACGATACCAGTGCAGCGCTACCAACGCAGCAGGAAAGCAGTCCAAAGATTTTAACCTCAGTATATTTGGTAATTTTGCTCTTATTATTGATTTTGCATCAACAGAATAGAAAAAAATTCTAAATGCTAAATGTCCTGTCTGTCTTTTCATTCGGCATCCCTAAGTGCCACCCAGTATTAAAGGAGGAAACGTGTCTTCTGAGGTGACCGTTCTGCTGGGTAACCTGGTGACTCTGGAGTGTGAGGTGCGTGGTGTGCCACTGCCTGCCGTCACATGGTACAAAAATGGAGAGGTCATTCTGTCTAGCAGACAGGCCCAGTATGTGGACCGAGGGCAGTTCCTCAAGATCTTAAGAGCTCAAGTTTCTGATGCTGGA[C/T]AGTACACATGTAGAGTCACCAGTGTGGCTGGCACTGCTGAAAAAGTTGTCGAGTTGGATGTGTATGGTGAGGGCTAACAAGTTTTATTGTTATTTTTTTTGTTAATTGTTATTAAAAGTGAAATATGTAAGTTTGACACCTAGTGGTTGAACTAGGTATTGCACGCCTGGTTCGAAACACACACAACAGCAGGTTGCCAGATTGACAACATTAACAGCAGTGTGCCTGACTGTTATTATACCTTCAGAATCTTATAAAGTCCCATGCCTATTGAGTACTTTCATAATAATTCATTTATTTGTAATTATTTGCATCATTACGTACAGTATGGTTTCATTCTACACCTTGACTTCTTCATATATTTATCCTTTATTCAGTTCCACCCTCCATCACTGCCGGTTCGGATGGTCCCACAGACATGAAAGTTGTGCTCAATAAATCTCTGATTTTGGAGTGTGAGGCTGAAGGTCACCCTCCACCCTCACTGACCTGGCTCAAGG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa32307
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000020389 | Nonsense | 1901 | 5616 | 36 | 107 |
ENSDART00000144705 | Nonsense | 1818 | 5534 | 35 | 106 |
ENSDART00000148185 | None | None | 289 | None | 5 |
Genomic Location (Zv9):
Chromosome 20 (position 34232555)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 20 | 34305068 |
GRCz11 | 20 | 34207947 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGGATGCTGGGAAATATACATGTGTGGCAACTAATGCAGCAGGCGAGGCA[C/T]AACAGCATATTCGCCTAAGTGTGCACGGTATGAGGTTTATGACAATTAAA
Long Flanking Sequence:
CTTTACCCATCTAGTTTTGCTTCATGTTTTCTTTTTCTGCTCTCAGAAAGGAAAGTATAAGGTGACTTTCAGGCTCCTTCTAAGTTATAAAAACATTTCAGTTAGTTTTTATGGCCAACGTCCATTGTTAATTTCTATAATATTTGTTTTTTAGTCCCCCCAGCTATACGCTCTACTGGTCCAGCTGAGAGGTCAGTGGTGCTTCACACATCCATCAGCCTCCAGTGTGTGGTTAGTGGAATCCCACCTCCCAGCACCACGTGGCTCAAAGATGGTCGTCCTGTGGACACCACACAAGAATTTCTGAAGGTCAGACTTTACGTAAAGCAGGAGCTCTCCAAAGAAAATCAAGTGTTTGATAGGGTTTGTGTGACCACATTATACTGTCTCCTCTCTGCATGTAGCTGGAATCCGCAGGCAGGGTGTTGCACATAAAGAAGGCCAGGCTGGAGGATGCTGGGAAATATACATGTGTGGCAACTAATGCAGCAGGCGAGGCA[C/T]AACAGCATATTCGCCTAAGTGTGCACGGTATGAGGTTTATGACAATTAAAAATTACTCTTTTACTCTATAATCTGATTAGGCAATGTTTTTATTGAATATGTGATAACTATAACATAATTTCTGAAGTGTGATAAGAGCTGTACATCATCTTTATGCACTGAAATGTTGATTTTACCAAATATTTATATTTAAAATCCACATGAACTGAAAGCTTCGACCATTTTGTTTTTGTATTGTGCCTCTAGTTCCTAGTGAAATGGATTATCATGTGAAAACCTGTGGCCCGGCTTGTTTTTTTTCTACAATGAGCTTATTGGATGTAATAAAGTAGGCATTTCATTCAGAAAGACCGGGAAAAGGGTTTGGGGAGAGTTATTACAACCTAATAGACTTTTCCTCCTCACCATTTCTGTTTGTTTTCATGGCTCTGTCAAAGTTGGAGGGGCATGGTTGAGTATGTAAACTATGCCCAATACTTCAGACAGACGTAATATGAGAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa16438
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000020389 | Nonsense | 2698 | 5616 | 52 | 107 |
ENSDART00000144705 | Nonsense | 2617 | 5534 | 51 | 106 |
ENSDART00000148185 | None | None | 289 | None | 5 |
Genomic Location (Zv9):
Chromosome 20 (position 34218338)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 20 | 34290851 |
GRCz11 | 20 | 34193730 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AYGCYGGAGTGTGAAGCTCAAGCTATCCCAAYACCGACACTAGTGTGGTA[C/A]AAGGATGGTCAGGTGAGAAWTGCACAAAACTCWRAATATTTTNCTCCTATG
Long Flanking Sequence:
TGCTTCCAGGTCAGACCTCAGACTTCCTCTTGGTGTAAATGAAAGATGTAAAGCTATATGCATTGTTTTTTTGGAATGTTTATTTTATTTTTTTCTCATTGCTGCTTCAAGTCGCTTTTTTATTTATATGGATTATGTTTAACACTGCTAGCTTATTGGTGTATCTTGTGACAGGTGGTCGCACTTTACAGATCTTGAATGCTAAGGAAGAGGATGCTGGGAGATATACATGTGTGGCGACTAATGAAGCTGGGGAGACACTGAAGAACTATGAGGTCAAAGTTTTCGGTGAGTGTTAGAACTGAGCTATATCGCCACCTTTTGATTTAGAGGAATCTAACATTTTTTTTCCTTCTGAAACTTGCAGTTCCTCCAGTTATCAATAAAAATGACATCCCAGGAGAAAGTCTTGCCCCCAAAGAGGTGAAAATCAAAGTTAACAACACCCTTACGCTGGAGTGTGAAGCTCAAGCTATCCCAACACCGACACTAGTGTGGTA[C/A]AAGGATGGTCAGGTGAGAAATGCACAAAACTCTAAATATTTTCTCCTATGAGCATTTTTGAGTTTTCACTCCAATGTGGTTCTTTCTTTCTGTAGATCCTGAAAGCGGATGGTCATCTCACTATCACAGCCAATGGTCGAATAGTTCAGATTAAACACACTCAGGTGTCCGATACTGGTCGATATACCTGTGTAGCCACCAACATTGCTGGAGAGGATGAGAAGGACTTTGATGTAAATATACAAGGTGAACAGGGTTTTACAAATTCAAAATGAAAAATTAAGAAGTCTCTGGATGCATATAGGCTATAAAGTTGCAAAGTTTAAGAGTTACAACAACATTTAAAAGGCTATAAAATTGGGAAAAGTTAGGAACTGACATCTGAATTTATCTGCAGTGTGTACATTTCCATTTAATTTTTTTTTACTTTCTTTCTTGTTTTGTTTTTTAGACATAAAATAAAAATAATCTTCTGTTTTAATCTAAATGAGTCTAATCAT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa17994
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000020389 | Nonsense | 2846 | 5616 | 55 | 107 |
ENSDART00000144705 | Nonsense | 2765 | 5534 | 54 | 106 |
ENSDART00000148185 | None | None | 289 | None | 5 |
Genomic Location (Zv9):
Chromosome 20 (position 34216299)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 20 | 34288812 |
GRCz11 | 20 | 34191691 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AGATACACATGTGTRGCTGTGAATGAGGCTGGTGAAGACTCAATCCAGTA[T/A]GATGTCAGAGTGTTGTGTGAGTATATTGTTTTGTACATGCTAAACATSAC
Long Flanking Sequence:
CTTGGGAGATTATCCTTTTCATTTTTTTCTATCTGTGGATTTTGTGCCATTATCTACAGGCTTTATCTTTGTCCATAATCCTAAAATCCTATCTGTGTCTCAGTTCCCCCTAGTTTTCGAGGCTTTGGAGACTCTGGCCCTGGTAATAATGGAGAGGTGAAGGATGTGATTCTTAATAATCCCATCTCCCTGTACTGTGAGACCAATGCCGTCCCTCCTCCTGTCCTCACCTGGTACAAAGACGGACACCTGCTGACCTCTAATGATAAAGTACTCATTCTGCCAGGTAATAAAAACATTTGAATTAAGTATCATGGCAAAATAATTTGTCAAATGTGTTCTGTATGTTAATGATCAGTGTATAAGACCTTAAAATATTTTGTTTCATATTTTTCTCACACAGGTGGCCGAGTCCTCCAGATTCCTCGAGCCCAGGTAGACGATACTGGGAGATACACATGTGTGGCTGTGAATGAGGCTGGTGAAGACTCAATCCAGTA[T/A]GATGTCAGAGTGTTGTGTGAGTATATTGTTTTGTACATGCTAAACATGACTAAAGCAACAACTTAAAGTGTTGCTCGTGTTTTTTGATAGTGCCGCCCTCAATTCGGGGAGCCGATGGTGAATTGCCTGATGAAGTCACAGTTCTGGTAAATAAGACTATGTTACTGGAGTGTCAGGTGGATGGAAGTCCCACTCCTAAAATCAGCTGGGTCAAGGACAGTCAGCCTCTCACCCAAGACAACACCCACAGGCTTCTGTCCAATGGCAGGACATTACAGGTAAATCATCTGTGATGTAACAGTAACTAGATTTTTATGTATGTATTATATATAAATATCAGGCTGCATGGTGGCTTAGTGATTAGCACTGTCGCCTCACAACAAGAAAGTTGCTCGTTTGAGTCCCAGATGGGCAAGTTGGCATTTCTGTGTGGAGTTTGCATGTTCTCCCGGTGTTGCCGTGGGTTTCCTCCGGGTTCTCCGGTTTCCCACACAGTCCAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa11019
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000020389 | Essential Splice Site | 4061 | 5616 | 80 | 107 |
ENSDART00000144705 | Essential Splice Site | 3980 | 5534 | 79 | 106 |
ENSDART00000148185 | None | None | 289 | None | 5 |
ENSDART00000020389 | Essential Splice Site | 4061 | 5616 | 80 | 107 |
ENSDART00000144705 | Essential Splice Site | 3980 | 5534 | 79 | 106 |
ENSDART00000148185 | None | None | 289 | None | 5 |
Genomic Location (Zv9):
Chromosome 20 (position 34202334)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 20 | 34274847 |
GRCz11 | 20 | 34177726 |
KASP Assay ID:
2261-4626.1 (used for ordering genotyping assays)
KASP Sequence:
TCAGAATCCAGCAGGCACTGCCCWGGGGAAAACYAAACTCAGAGTTCAAG[G/A]TTAGGCTCMCTCATAGGCTGGGATGATTAAACATCTGTGRAARAGGTTAT
Long Flanking Sequence:
CAACGGGCTCGCCTCGCCCAACTATTACCTGGCAGAAAGAGGGCATCAACATCTTTACCACAGGTGGAAAATAATTCTACCACTCTGGAGATCAACACCAAGCTTTACATCTAGCATCTTAATCAATGCATTTTATTACAATATTGTATAATATAACATTGTATTGTTTTCTGTACATTAATATTCAGACAATAGCTTGCTGTTTTTTATTCACCAAGGCTTTATTTATTTATTTATTTGTTTATTTATTTAGATCAAAAAATTGTTATACAATTAAATCTGTTTTATTAAATTTTAAAATGCCTATGTTGGTAAAGTACGTTCTATTACCAATGCTGGCAAAATGCAAACCCTTTCATTCTCAGGAGGTGGTTTTACGGTGCTCCCCAATGGTGGTCTGCAGATCTCTAAAGCCAAAGTGGAGGATTCTGGGACCTACATGTGTGTAGCTCAGAATCCAGCAGGCACTGCCCTGGGGAAAACCAAACTCAGAGTTCAAG[G/A]TTAGGCTCCCTCATAGGCTGGGATGATTAAACATCTGTGAAAAAGGTTATAAGTTTCACTTCTCTTGCAGTTCCCCCAGTCATAACATCTGACATCAGGGCCTACACTGTGGCATTAGATGTTTCGGTAACTCTGCAGTGCAACTCGGAGGGTTTCCCCACTCCCTCTGTCTCCTGGCATAAAGACGGGCAGCTGCTGAGTGAGTCAGTGCGTCAACGAGTCCTTAGCACAGGCGCACTGCAGATCGCATTTGCTCAACCTGGAGACACTGGCAGATACACCTGCACTGTTGCTAATGTAGCTGGAAGCAGCAGTCTGGATATCAGCCTTACTGTACAGAGTGAGTCACAAGGATTTCGAGATTGATTGAATTATTAATGTGAATGAAATTACAATTGATTTATTATATTTTTAGTATAGTTTAATTAAATGTTATTAGAGATTGGTTGTTTAAATGAATATTAGGTTTAATTTTGAAACAGTATTTTATACATATATAC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa23756
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000020389 | Essential Splice Site | 4620 | 5616 | 89 | 107 |
ENSDART00000144705 | Essential Splice Site | 4538 | 5534 | 88 | 106 |
ENSDART00000148185 | None | None | 289 | None | 5 |
Genomic Location (Zv9):
Chromosome 20 (position 34196538)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 20 | 34269051 |
GRCz11 | 20 | 34171930 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GAGGGCAAAGCGGTGGAGGCCATCATGTGTAGCATAAGACCATGCCCAGG[T/C]GAGTGGATAAACATATCTTCTTCTGCATATGCATATCAGCCTTTATCACT
Long Flanking Sequence:
CCTTTTTCTTTACAATAATAAATACAATACAAAAAGTAATTCATTTATTATTTCACTCATATTTTAAGGTATTTTTATTTTATTTATTTTTTATTTGTAATTTGTGTTTTTCACATTTTTATTAGCTTTTGAGGTTTTCTATTTTCTCTTTAGTTTTAATTTTTTTTAGGATTTGATATTTTAGTGTTAATACCTTAACTTATTTATTATTGTATCATTTGTTTTATTTTTCTGTACCCTAAGGAGTTCTTCTAAACAAAAAAAGCAATAATGTAGAGGCTCATTTACTCCGTTTTCTATTATTGTAATCATCTCTTTGTCTAAATAGTGGATGGTAGTTGGTCAGAGTGGTCTTCCTGGGAGGAGTGCTCTCGTACCTGCGGTCAGGGTAACAGAACAAGGGTGCGGACATGTAGTAATCCTCCTGCCCAGCATGGAGGGAGAGCTTGCGAGGGCAAAGCGGTGGAGGCCATCATGTGTAGCATAAGACCATGCCCAGG[T/C]GAGTGGATAAACATATCTTCTTCTGCATATGCATATCAGCCTTTATCACTCTGACTGGTTTCTTATCTATCAGTGGCGGGAAACTGGGGTGCCTGGTTGCCTTGGAGCCCTTGTAGTGAAACTTGTGGCAAAGGGATGCAGACAAGACTCAGACTCTGCAACAATCCTCCACCTTCATTTGAAGGGCCGTCGTGTGAAGGACCAGACACACAGACACAAGTGTGCAATGAAAGGAATTGCCCTGGTGAATGAATAGCGATAGAATTGACATTTACTTCTTATACAGATTTTTAAAGCACTGGCTTATCTTCTCTTCTCTTCTTCGACAGTGGATGGTAAGTGGTCATCCTGGGTAAGTTGGGGGGCTTGTAGTGTTTCTTGTGGAGGCGGTACAAGGCAAAGGACACGCATCTGTGCAAATCCCACACCCCAACATGGTGGACGGCAGTGTGAGGGAAATGACATCCACATTGACTTCTGCAACAATGAACCCTGCCCCA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa32306
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
A > T
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000020389 | Essential Splice Site | 4734 | 5616 | 92 | 107 |
ENSDART00000144705 | Essential Splice Site | 4652 | 5534 | 91 | 106 |
ENSDART00000148185 | None | None | 289 | None | 5 |
Genomic Location (Zv9):
Chromosome 20 (position 34195968)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 20 | 34268481 |
GRCz11 | 20 | 34171360 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACGCAATGGTATAATGAACCAAGCAAAAACTACAAATGATCTCTCTTCAT[A/T]GTTCATGGAAACTGGGGCCCATGGAACAGCTGGGGCAGTTGTAGCAGAAC
Long Flanking Sequence:
TCAGTGGCGGGAAACTGGGGTGCCTGGTTGCCTTGGAGCCCTTGTAGTGAAACTTGTGGCAAAGGGATGCAGACAAGACTCAGACTCTGCAACAATCCTCCACCTTCATTTGAAGGGCCGTCGTGTGAAGGACCAGACACACAGACACAAGTGTGCAATGAAAGGAATTGCCCTGGTGAATGAATAGCGATAGAATTGACATTTACTTCTTATACAGATTTTTAAAGCACTGGCTTATCTTCTCTTCTCTTCTTCGACAGTGGATGGTAAGTGGTCATCCTGGGTAAGTTGGGGGGCTTGTAGTGTTTCTTGTGGAGGCGGTACAAGGCAAAGGACACGCATCTGTGCAAATCCCACACCCCAACATGGTGGACGGCAGTGTGAGGGAAATGACATCCACATTGACTTCTGCAACAATGAACCCTGCCCCAGTGAGTAAACAGATTTCAGACGCAATGGTATAATGAACCAAGCAAAAACTACAAATGATCTCTCTTCAT[A/T]GTTCATGGAAACTGGGGCCCATGGAACAGCTGGGGCAGTTGTAGCAGAACCTGCAATGGTGGTCAAATGAGACGGTACAGAACATGTGACAATCCTCGACCAGCGAATGGAGGCAGAGCGTGTACTGGATCAGACTCACAAATCCAGAAGTGTAACACAGCCAACTGCCCTGGTAAAGCAGTCATGCTGTACAAACAATACCTTTTAAAAGTTTGAAGGGATTTGTGGGATTTTAAAAGCTCTTTTAAAGTTATGTCATATAGTTCTCTTAAGTTAGATGTTTTAAAGTTGTCTCCAATACTCACAAACAAGTTTTAATGTAAGAAACAAAGTTTTTTAAGATAAAACAACAAAAAAACAATTGCTTCCCAAACTAATAAACTGTTTCATAGTGTTTGAAATACCACATGCTAGGGTTAAACAACGTAAATGCAGGAACGGCATAGATTAAAATTGGCTTTTTCAAACTGTAACTATATATGTACTGTAACTTACCAATT
Associated Phenotype:
Not determined