ZMP
stxbp5a
Ensembl ID:
ZFIN ID:
Description:
syntaxin-binding protein 5 [Source:RefSeq peptide;Acc:NP_001093451]
Human Orthologue:
STXBP5
Human Description:
syntaxin binding protein 5 (tomosyn) [Source:HGNC Symbol;Acc:19665]
Mouse Orthologue:
Stxbp5
Mouse Description:
syntaxin binding protein 5 (tomosyn) Gene [Source:MGI Symbol;Acc:MGI:1926058]
Alleles
There are 4 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa39287 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa23739 | Nonsense | Available for shipment | Available now |
| sa1213 | Nonsense | F2 line generated | Not yet available |
Mutation Details
Allele Name:
sa39287
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000101760 | Nonsense | 153 | 748 | 5 | 22 |
| ENSDART00000101762 | Nonsense | 153 | 1129 | 5 | 27 |
| ENSDART00000133788 | None | None | 177 | None | 5 |
| ENSDART00000139417 | None | None | 217 | None | 6 |
| ENSDART00000142806 | Nonsense | 153 | 1128 | 5 | 27 |
Genomic Location (Zv9):
Chromosome 20 (position 31863190)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 20 | 31921430 |
| GRCz11 | 20 | 31824309 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTTTCTCTTCAGGATAACGTTCTGTCATCTGCCCTTCCAAAGCAAATGGT[T/A]GTACATCGGCTCGGAACGAGGAAACATCCACATCGTGAATGTGGAGTCCT
Long Flanking Sequence:
CATGGAGAGAACATGCAAACTCAACAAAGAAACTCCAACTGACCTAGCCAGGACTCGAACCAGCGACCTTCTGGCTGTGAAGCGATCATGCTAACCACTGAGCCACTGTGCTGCCCAAGCCTAATAAAGTAAAGAAGTAAAAACACATAAAACACTTACAGTACAGACATTTGCATTACTGATTATTGTTAAACAGTCTGATCGACACAGAAATAAAATAGTTTTGAGCCTATTCTGCTTGCATCGAGGGATTCTGTATCTTTTGCAAGTGGGTAGGAGATCATAACATGGGAAGAGTACTTGAGATGGTTTGCTTAGAATTTTTTTTCTCTGTGTAAAACATATCAGTGTACACGAATACAGTGTTGATGTGCAAATAAGTGATCCTATTGTTTGTTTGTTTTTAAAATAAATGTGAAATAATAAAACCAACAAATTTCTTCTTCTTCATTTTCTCTTCAGGATAACGTTCTGTCATCTGCCCTTCCAAAGCAAATGGT[T/A]GTACATCGGCTCGGAACGAGGAAACATCCACATCGTGAATGTGGAGTCCTTTACCCTCTCAGGATACACCATCATGTGGAACAAAGCCATTGAACTGTGAGTCCTGAAATCTGATTCGCAATATATCATACATGTCACATCTGTCATTTTTCCTGTAGCCTTGTTATGTTTCATTTGCGACTAAGGGATCATTTCGATCAAATGCCGCTTTAAATTGTCAATTCACCTGCTCTCCCTCCATCGCTCTCCTCCTGAGATACTATGCGTTCTTCAATTATTCATTCTAACATTTTGTCAGCAGTTTTGTTTCCCTCCCTGACCCGTTGAAAAGACTGCAGTGCCTTTGAGACCCGGACACACAACCACGCACACACACACACACACACACACACACACACACACACATTTACAGGTGTCTGATCGGATCAGTGTTAGAATAGACAGATGTCCTGCTTTAGTGCGTACATAAACACTTAGAGACAGACACGTTTTGCCCCTTG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa23739
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000101760 | Nonsense | 159 | 748 | 5 | 22 |
| ENSDART00000101762 | Nonsense | 159 | 1129 | 5 | 27 |
| ENSDART00000133788 | None | None | 177 | None | 5 |
| ENSDART00000139417 | None | None | 217 | None | 6 |
| ENSDART00000142806 | Nonsense | 159 | 1128 | 5 | 27 |
Genomic Location (Zv9):
Chromosome 20 (position 31863173)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 20 | 31921413 |
| GRCz11 | 20 | 31824292 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CGTTCTGTCATCTGCCCTTCCAAAGCAAATGGTTGTACATCGGCTCGGAA[C/T]GAGGAAACATCCACATCGTGAATGTGGAGTCCTTTACCCTCTCAGGATAC
Long Flanking Sequence:
AACTCAACAAAGAAACTCCAACTGACCTAGCCAGGACTCGAACCAGCGACCTTCTGGCTGTGAAGCGATCATGCTAACCACTGAGCCACTGTGCTGCCCAAGCCTAATAAAGTAAAGAAGTAAAAACACATAAAACACTTACAGTACAGACATTTGCATTACTGATTATTGTTAAACAGTCTGATCGACACAGAAATAAAATAGTTTTGAGCCTATTCTGCTTGCATCGAGGGATTCTGTATCTTTTGCAAGTGGGTAGGAGATCATAACATGGGAAGAGTACTTGAGATGGTTTGCTTAGAATTTTTTTTCTCTGTGTAAAACATATCAGTGTACACGAATACAGTGTTGATGTGCAAATAAGTGATCCTATTGTTTGTTTGTTTTTAAAATAAATGTGAAATAATAAAACCAACAAATTTCTTCTTCTTCATTTTCTCTTCAGGATAACGTTCTGTCATCTGCCCTTCCAAAGCAAATGGTTGTACATCGGCTCGGAA[C/T]GAGGAAACATCCACATCGTGAATGTGGAGTCCTTTACCCTCTCAGGATACACCATCATGTGGAACAAAGCCATTGAACTGTGAGTCCTGAAATCTGATTCGCAATATATCATACATGTCACATCTGTCATTTTTCCTGTAGCCTTGTTATGTTTCATTTGCGACTAAGGGATCATTTCGATCAAATGCCGCTTTAAATTGTCAATTCACCTGCTCTCCCTCCATCGCTCTCCTCCTGAGATACTATGCGTTCTTCAATTATTCATTCTAACATTTTGTCAGCAGTTTTGTTTCCCTCCCTGACCCGTTGAAAAGACTGCAGTGCCTTTGAGACCCGGACACACAACCACGCACACACACACACACACACACACACACACACACACACATTTACAGGTGTCTGATCGGATCAGTGTTAGAATAGACAGATGTCCTGCTTTAGTGCGTACATAAACACTTAGAGACAGACACGTTTTGCCCCTTGCGACTTTCGGCAATTGC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa1213
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000101760 | Nonsense | 505 | 748 | 15 | 22 |
| ENSDART00000101762 | Nonsense | 505 | 1129 | 15 | 27 |
| ENSDART00000133788 | None | None | 177 | None | 5 |
| ENSDART00000139417 | Nonsense | 57 | 217 | 3 | 6 |
| ENSDART00000142806 | Nonsense | 505 | 1128 | 15 | 27 |
Genomic Location (Zv9):
Chromosome 20 (position 31816120)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 20 | 31874360 |
| GRCz11 | 20 | 31777239 |
KASP Assay ID:
554-1122.1 (used for ordering genotyping assays)
KASP Sequence:
CAGCACAGAGATTGTGGATGAAGACCCATTCGCCATTCAGTTGATGTCTT[G/A]GTGTCCCGAGAGCCGAATGCTTTGTGTGGCTGGTGTCTCTGCCCACRTCA
Long Flanking Sequence:
ACTTTTCAGAAATGTATTCAGCATTACATTTTCAGAATGAGCCTGGGTTTGGTTTATTCATACTCAAGTGGCTCCAAACATATATGAATTTCTTTCTTGCAGTGAACACAAAAATATATCTCTTCTTTTGTGATCATCAGAAAAAAAAAGTTTCTTTCTTCTGTTGAACACAAAAAAGATTTTTCTCATAACTCATAAATGTTTGGAACCACTTGAGGGTGACTACATTTTTTTATTTTCGGGTGAACTGTCCTTTTAACTTCCAATCCTGGTACAGTACGAAATGTTGGTATTCATTTCAAAATTATTTTGGTTACAATTTGGGGAATATCTCTGGTTGACTGTACATTATTTTTCACATTTCCCATTGTGCTCAGTAATGCTCCAGGTCCTGTACAAACTGAAAACAGCAAAGGTGTTTGAGAAGGCACGCTGTAAGGAGGAGAAACCCAGCACAGAGATTGTGGATGAAGACCCATTCGCCATTCAGTTGATGTCTT[G/A]GTGTCCCGAGAGCCGAATGCTTTGTGTGGCTGGTGTCTCTGCCCACGTCATCATATACAGGTTTAGCAAACAGGAAATCACCACAGAAGTAGTGCAGGTAAAGTATGTTTTCATCTCGACTTGAAAACTTGGTTTTCTAAAGAGGAGTGAGTAATGCTGTCCTTATAGGCGCTTTAAGTCTCCCTCTCTCCTTCCCTGTCTCGAGTTATTTTAGTTTCCTGACAACTGCCATGACTCATAACGTTAATAATATTATAAAATCTGTTCATTAAATGGATGTTGTTCAGCGACTTGAATGCGTGTGTGCATTTCTGCATGTGTATGTGCCATCTAAGGATATCTGCAGAACAGTTGTTACTCAGATGCTTACCTAAATCCCTAAGCCTTTCAAAGCTGTTTTAATTAATGTGCACCACATCTTGCTGTATATATTGAGCTTGAATAATTAATACTGCATTCATTTTGCCCTCTCACTGTTTTTTTTTTTTTTTTTTTTTTTT
Associated Phenotype:
Normal
| Stage | Entity | Quality | Tag |
|---|---|---|---|
| Larval:Day 5 ZFS:0000037 |
whole organism ZFA:0001094 |
quality PATO:0000001 |
normal PATO:0000461 |