ZMP
si:dkey-33i22.3
Ensembl ID:
ZFIN ID:
Human Orthologue:
RP1L1
Human Description:
retinitis pigmentosa 1-like 1 [Source:HGNC Symbol;Acc:15946]
Mouse Orthologue:
Rp1l1
Mouse Description:
retinitis pigmentosa 1 homolog (human)-like 1 Gene [Source:MGI Symbol;Acc:MGI:2384303]
Alleles
There are 12 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa29330 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
| sa23667 | Nonsense | Available for shipment | Available now |
| sa7469 | Missense | Mutation detected in F1 DNA | Not yet available |
| sa32286 | Nonsense | Available for shipment | Available now |
| sa6628 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa37002 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa12633 | Nonsense | Available for shipment | Available now |
| sa12624 | Nonsense | Available for shipment | Available now |
| sa43409 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa14900 | Nonsense | Available for shipment | Available now |
| sa23668 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa29330
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > G
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000122595 | Essential Splice Site | 230 | 3919 | 3 | 3 |
| ENSDART00000138888 | None | None | 81 | None | 2 |
Genomic Location (Zv9):
Chromosome 20 (position 19209516)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 20 | 19237773 |
| GRCz11 | 20 | 19137356 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTACTTTGTATTTATTAATGTTAACTTATTTACTTTGTTTACTTTCTTGT[A/G]GTCAACTTTGGACTTGAAACAAAGAGAAGTGTCATCCACCCAAGGTGTGA
Long Flanking Sequence:
TCACTGAACAGTAAGAATGATTAATAAATCCATATGAAACAGCCCCTTAAAAGTCACGTCTCGCTTTCAGTTTTGGGCTGAGCCCAAGTGAACCGGGCTCAGGCAGACCTCTTCCAATCGGGCCAGGGCCGGCCAAGTGAACCGTGCTTGAGCCCGATTCAGCGCACTCACACTTCTCAAACGATCCGGGAAACGGGCCTGGGCACGGTACGGATGGCATAGTGTGAGTAGGCCCTTAGTCCAGATGTGGTCGCAAACCGACAACACAGTTGGTTTACGTCGATGCTAGTTGTTTGGCGTCAACTAGGTGTGTCCCAGTCTTTCGAGTTAACTGCTCTTGTTGGATTGTTTTGGAAATAAGCTGAGTAATAAATCTGGATCCATCTATTTAATTTAAAATTAATGATATGAAAAAGGTTGTTTTAAATTTGTGCCACATTCATGAAGTTATTACTTTGTATTTATTAATGTTAACTTATTTACTTTGTTTACTTTCTTGT[A/G]GTCAACTTTGGACTTGAAACAAAGAGAAGTGTCATCCACCCAAGGTGTGACTCAAGCAACAGGTCTGCAAGACTCTCTGCCTCATCAGAAAAATTGTTTCCAAATCGACTTGACTCATTACCACCAGGGGACAGAGGTGATTGTGTCCATGCAGGTGAAAATATGATGGATGATGATATTGAAAAGCGAGTTCTGGTCAATAAAGATGGCAGCCTGTCAATGGAGATGAAAGTGCGTTTTCGACTCTTGCACAACGAGACATTGCACTGGTCCACAGAGGTCAAAAAGTCAAAGAGCACTTTTAATGATTCCCATTTAGTATCTGATGATGCTTGCTCAGTCTCGCATGGCAGTTCAGAGAGCTGCTCCGAAGCCGACTCTCTTTCTGCTGGTGAAGCAAATGAAACATACCACACAAAGCGTTACCAAAGACATTTTGAAGAGTCACACTGTCAGCACTGCTGTGCTCGCTGTCAGGAATATGACATCTGGAAGAATCC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa23667
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000122595 | Nonsense | 539 | 3919 | 3 | 3 |
| ENSDART00000138888 | None | None | 81 | None | 2 |
Genomic Location (Zv9):
Chromosome 20 (position 19210444)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 20 | 19238701 |
| GRCz11 | 20 | 19138284 |
KASP Assay ID:
2261-4130.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGCAAGTAGAGGAAGATGAGAGGTCTATATCTGTCTTGAGCTCTTCCTCA[C/T]AAATTCTAGCATCACTGAAGGAGGATCAAGATGATGACGTCAACCCCACT
Long Flanking Sequence:
AAAGACATTTTGAAGAGTCACACTGTCAGCACTGCTGTGCTCGCTGTCAGGAATATGACATCTGGAAGAATCCTGTACCTCCCAGTCAAGGAGCTGTAAGACGCATCAGATCCTCAAGCTCAAGTGCATCCTCAAGAAGAATAGTGTGCAAAAAGGCATCTACTGACAGCATTCGCACAGTGTCCAGTGAGGAGTACACAGAGCATGTAGTGGAAAAGGCAACTTGCATTCAACAGACCTTCGGACAGCAAGTAGATACAACAATTGAACAGTGTACCATCAACCATTGCTGCAGTCGAAGTGAAGTATCCTCAATATCCCCTAAACCAAAGAGCACAAGTACTGTAGATGATAGGTGTGAGAACATTCATGCATCTGATAATGAAGAGAACAGACCTGATGTAATTTCCTCCAACCTCCCTAAAGATCATTTAAGTGTTCAGATCACTCAGCAAGTAGAGGAAGATGAGAGGTCTATATCTGTCTTGAGCTCTTCCTCA[C/T]AAATTCTAGCATCACTGAAGGAGGATCAAGATGATGACGTCAACCCCACTATCTCGAGAGCATCCCATGACCAACAGGATGATGAGGAGAGCAAAGATCCTGAAACAAACCAATGTTCTGCTTCACCCTGTAAATCTCCTGCATCTCTGAGGCATCTGTCACCAAGACCACCGAGCAAGGCTTCATCTTCAGGGCGGTCTAAAACTTACAGAAAGTTTGCCAGTCCTGAAGTTGGCACTGAAGAGGTCAGGTCTGAAGCATCTGCTTCCCCCAACATTTTGTCTGGACCCAAAACCTGTAAATGTGTAGTGACAAAGGACACTCCAGAAGCTTCTGAAACAAATGATGAGGTAGAAGACATGCAAGTTTCAGTAACTGAGGAAAGGGCACTAAGTGCAACTTCTACAAAGTCTCTGTCTGAGTTATCAACCTCGTGTGAGAATGGAAATCCTGCTGAAATAATACCAGAGAAGCGATCATTAAGTGCTCTCTCTATAAAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa7469
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Missense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000122595 | Missense | 617 | 3919 | 3 | 3 |
| ENSDART00000138888 | None | None | 81 | None | 2 |
Genomic Location (Zv9):
Chromosome 20 (position 19210678)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 20 | 19238935 |
| GRCz11 | 20 | 19138518 |
KASP Assay ID:
554-4240.1 (used for ordering genotyping assays)
KASP Sequence:
CATCTTCAGGGCGGTCTAAAACTTACAGAAAGTTTGCCAGTCCYGAAGTT[G/T]GCAMTGAAGAGGTCAGGTCTGAAGCATCTGCTTCCCCCAACATTTTGTCY
Long Flanking Sequence:
AGACCTTCGGACAGCAAGTAGATACAACAATTGAACAGTGTACCATCAACCATTGCTGCAGTCGAAGTGAAGTATCCTCAATATCCCCTAAACCAAAGAGCACAAGTACTGTAGATGATAGGTGTGAGAACATTCATGCATCTGATAATGAAGAGAACAGACCTGATGTAATTTCCTCCAACCTCCCTAAAGATCATTTAAGTGTTCAGATCACTCAGCAAGTAGAGGAAGATGAGAGGTCTATATCTGTCTTGAGCTCTTCCTCACAAATTCTAGCATCACTGAAGGAGGATCAAGATGATGACGTCAACCCCACTATCTCGAGAGCATCCCATGACCAACAGGATGATGAGGAGAGCAAAGATCCTGAAACAAACCAATGTTCTGCTTCACCCTGTAAATCTCCTGCATCTCTGAGGCATCTGTCACCAAGACCACCGAGCAAGGCTTCATCTTCAGGGCGGTCTAAAACTTACAGAAAGTTTGCCAGTCCTGAAGTT[G/T]GCACTGAAGAGGTCAGGTCTGAAGCATCTGCTTCCCCCAACATTTTGTCTGGACCCAAAACCTGTAAATGTGTAGTGACAAAGGACACTCCAGAAGCTTCTGAAACAAATGATGAGGTAGAAGACATGCAAGTTTCAGTAACTGAGGAAAGGGCACTAAGTGCAACTTCTACAAAGTCTCTGTCTGAGTTATCAACCTCGTGTGAGAATGGAAATCCTGCTGAAATAATACCAGAGAAGCGATCATTAAGTGCTCTCTCTATAAAATCCAACAACTCTAGAAAATCAGTTAAAACAAATGTTTTAGATTACGATGAAAGAGCACTAAGTGCCACATCAAACAAGTCTCAAAGAGTCTCAGGTGATGTGTGTGAGGAGGAAAACCTAGAAGTAAGAAAATCAAGTGCCATGTCTGTCAACTCAAATATATCAGTGAGATCCAGAGTATCAGATCATGGTATTGGTGAGCTCGGCAAATTACAAGACAATGTTGAGAAAAGG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa32286
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000122595 | Nonsense | 2587 | 3919 | 3 | 3 |
| ENSDART00000138888 | None | None | 81 | None | 2 |
Genomic Location (Zv9):
Chromosome 20 (position 19216588)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 20 | 19244845 |
| GRCz11 | 20 | 19144428 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGGACACAAGTTCAGGCAGCGCTCCAACACTACAAAGAGGTCAGTTATCA[A/T]AAAAGATTTCTCAAGATCCAGATCCTGTATGGGTTCTGAATTTATTGAAC
Long Flanking Sequence:
GTGACCCAAAAAACAAGAAGGAGACATCAGAAGAGAAAGGCAAACATCTGGATGAGGAATTGAAAGCCAGATCATCCTCAGGTGTAGATGTTAACAGTGGCTCGACAGGTTCTGGGAAAAGCAGTGTCAATGATGGCACCCAAGTCCAACCTAACACTGATTGTGAAGGCTTGGATACCCTGACAAAGGTACAGGAAGTTGAAGAAACAGTAGAAGAAGAAACTTCAAAAACACCAGAGTCAAAAAATGATTCAGCCACTCCAGATGTAGCAAATCAAACTCAGATGACACCAGACAAAAATGTAGAGAAGCTAAAAGATGATGTTCCAGGCTCTGATGAGACAATCAGGAGTTATGATAGCCCAAGGGAACTCATTGAAACCCCTCTTTCATCAAACAAAAGTTCTGGGAATAATCCCAAAACGGAAGAACCCCAATCAGACCATCAAGAGGACACAAGTTCAGGCAGCGCTCCAACACTACAAAGAGGTCAGTTATCA[A/T]AAAAGATTTCTCAAGATCCAGATCCTGTATGGGTTCTGAATTTATTGAACAAATTAGAAAAGCAATTTATGACTCATTATGTGGATGCAATGGCTGAGTTTAAAGTCCGTTGGAATCTGGATGAAAACGAGCAGCTTGACACTATGATATCCGAATTGCAAGATGAAGTCCAGAGACGCATACAATATAGTATTGACAAGGAGCTAAAGAAGATCCATGGCAGAGCTGGCAGGCCAAAGCCACCAAAAGAAACAATATCCCGTGAATCAACCATTCAAACAGAGCAAAGGCGGAGGCGTCTGAAGGTGATGCGTAACCAATCTATTGATCCACAACCTGCTAAAAGTGACGATGACTACACAATGACAGGCACAGATTTCAGCGATCAACGTAGTGATGATGAATATTGTCCTTGTGAATCATGCTTAAAAAAGAAAATGGCATCAAAGCCTGTGTTACCTGTGGAAATACTGAATTCAGCACCTGTGATGATGGACTTT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa6628
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > G
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000122595 | Nonsense | 2649 | 3919 | 3 | 3 |
| ENSDART00000138888 | None | None | 81 | None | 2 |
Genomic Location (Zv9):
Chromosome 20 (position 19216776)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 20 | 19245033 |
| GRCz11 | 20 | 19144616 |
KASP Assay ID:
554-4534.1 (used for ordering genotyping assays)
KASP Sequence:
GACACTATGATATYCGAATTGCAAGATGAAGTCCAGAGACGCATACAATA[T/G]AGTATTGACAAGGAGCTAAAGAAGATCCATGGCAGAGCTGGCAGGCCAAR
Long Flanking Sequence:
GTACAGGAAGTTGAAGAAACAGTAGAAGAAGAAACTTCAAAAACACCAGAGTCAAAAAATGATTCAGCCACTCCAGATGTAGCAAATCAAACTCAGATGACACCAGACAAAAATGTAGAGAAGCTAAAAGATGATGTTCCAGGCTCTGATGAGACAATCAGGAGTTATGATAGCCCAAGGGAACTCATTGAAACCCCTCTTTCATCAAACAAAAGTTCTGGGAATAATCCCAAAACGGAAGAACCCCAATCAGACCATCAAGAGGACACAAGTTCAGGCAGCGCTCCAACACTACAAAGAGGTCAGTTATCAAAAAAGATTTCTCAAGATCCAGATCCTGTATGGGTTCTGAATTTATTGAACAAATTAGAAAAGCAATTTATGACTCATTATGTGGATGCAATGGCTGAGTTTAAAGTCCGTTGGAATCTGGATGAAAACGAGCAGCTTGACACTATGATATCCGAATTGCAAGATGAAGTCCAGAGACGCATACAATA[T/G]AGTATTGACAAGGAGCTAAAGAAGATCCATGGCAGAGCTGGCAGGCCAAAGCCACCAAAAGAAACAATATCCCGTGAATCAACCATTCAAACAGAGCAAAGGCGGAGGCGTCTGAAGGTGATGCGTAACCAATCTATTGATCCACAACCTGCTAAAAGTGACGATGACTACACAATGACAGGCACAGATTTCAGCGATCAACGTAGTGATGATGAATATTGTCCTTGTGAATCATGCTTAAAAAAGAAAATGGCATCAAAGCCTGTGTTACCTGTGGAAATACTGAATTCAGCACCTGTGATGATGGACTTTGATTTGAGAAAAATACTCCAGATAAAAAAATCGTCTCCAGCCAATGAAAAGATTGAGGAGAACGCCAGTACATCTACGTCCAGTAAGATGGAGGAAGAAAATGTGGGGCTTGAGGCTGTAAAAGAGGAGGAGGAGAAAGAGGGAGGAGAAATTATTTTTTCTGGTATCCAAGAAATTAGGGAACGAAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa37002
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000122595 | Nonsense | 2682 | 3919 | 3 | 3 |
| ENSDART00000138888 | None | None | 81 | None | 2 |
Genomic Location (Zv9):
Chromosome 20 (position 19216873)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 20 | 19245130 |
| GRCz11 | 20 | 19144713 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CAAAGCCACCAAAAGAAACAATATCCCGTGAATCAACCATTCAAACAGAG[C/T]AAAGGCGGAGGCGTCTGAAGGTGATGCGTAACCAATCTATTGATCCACAA
Long Flanking Sequence:
TGACACCAGACAAAAATGTAGAGAAGCTAAAAGATGATGTTCCAGGCTCTGATGAGACAATCAGGAGTTATGATAGCCCAAGGGAACTCATTGAAACCCCTCTTTCATCAAACAAAAGTTCTGGGAATAATCCCAAAACGGAAGAACCCCAATCAGACCATCAAGAGGACACAAGTTCAGGCAGCGCTCCAACACTACAAAGAGGTCAGTTATCAAAAAAGATTTCTCAAGATCCAGATCCTGTATGGGTTCTGAATTTATTGAACAAATTAGAAAAGCAATTTATGACTCATTATGTGGATGCAATGGCTGAGTTTAAAGTCCGTTGGAATCTGGATGAAAACGAGCAGCTTGACACTATGATATCCGAATTGCAAGATGAAGTCCAGAGACGCATACAATATAGTATTGACAAGGAGCTAAAGAAGATCCATGGCAGAGCTGGCAGGCCAAAGCCACCAAAAGAAACAATATCCCGTGAATCAACCATTCAAACAGAG[C/T]AAAGGCGGAGGCGTCTGAAGGTGATGCGTAACCAATCTATTGATCCACAACCTGCTAAAAGTGACGATGACTACACAATGACAGGCACAGATTTCAGCGATCAACGTAGTGATGATGAATATTGTCCTTGTGAATCATGCTTAAAAAAGAAAATGGCATCAAAGCCTGTGTTACCTGTGGAAATACTGAATTCAGCACCTGTGATGATGGACTTTGATTTGAGAAAAATACTCCAGATAAAAAAATCGTCTCCAGCCAATGAAAAGATTGAGGAGAACGCCAGTACATCTACGTCCAGTAAGATGGAGGAAGAAAATGTGGGGCTTGAGGCTGTAAAAGAGGAGGAGGAGAAAGAGGGAGGAGAAATTATTTTTTCTGGTATCCAAGAAATTAGGGAACGAAAAAGTGAGGAGGGTGATGAGGAAGACAATGCCTCCAGCACTTATGTAGAAGATAGTTCTGAGAAACAGTCGAATGCACCTAGTCAATTACGGGCAGTT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa12633
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000122595 | Nonsense | 2773 | 3919 | 3 | 3 |
| ENSDART00000138888 | None | None | 81 | None | 2 |
| ENSDART00000122595 | Nonsense | 2773 | 3919 | 3 | 3 |
| ENSDART00000138888 | None | None | 81 | None | 2 |
Genomic Location (Zv9):
Chromosome 20 (position 19217146)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 20 | 19245403 |
| GRCz11 | 20 | 19144986 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GAAAAATACTCCAGWTAAAAAAATYGTCTCCAGCCAATGAAAAGATTGAG[G/T]AGAACGCCAGTACATCTACGTCCAGTAAGATGGAGGAAGAAAATGTGGKG
Long Flanking Sequence:
AAAAGCAATTTATGACTCATTATGTGGATGCAATGGCTGAGTTTAAAGTCCGTTGGAATCTGGATGAAAACGAGCAGCTTGACACTATGATATCCGAATTGCAAGATGAAGTCCAGAGACGCATACAATATAGTATTGACAAGGAGCTAAAGAAGATCCATGGCAGAGCTGGCAGGCCAAAGCCACCAAAAGAAACAATATCCCGTGAATCAACCATTCAAACAGAGCAAAGGCGGAGGCGTCTGAAGGTGATGCGTAACCAATCTATTGATCCACAACCTGCTAAAAGTGACGATGACTACACAATGACAGGCACAGATTTCAGCGATCAACGTAGTGATGATGAATATTGTCCTTGTGAATCATGCTTAAAAAAGAAAATGGCATCAAAGCCTGTGTTACCTGTGGAAATACTGAATTCAGCACCTGTGATGATGGACTTTGATTTGAGAAAAATACTCCAGATAAAAAAATCGTCTCCAGCCAATGAAAAGATTGAG[G/T]AGAACGCCAGTACATCTACGTCCAGTAAGATGGAGGAAGAAAATGTGGGGCTTGAGGCTGTAAAAGAGGAGGAGGAGAAAGAGGGAGGAGAAATTATTTTTTCTGGTATCCAAGAAATTAGGGAACGAAAAAGTGAGGAGGGTGATGAGGAAGACAATGCCTCCAGCACTTATGTAGAAGATAGTTCTGAGAAACAGTCGAATGCACCTAGTCAATTACGGGCAGTTGTGGATGATGATGATGATGATGATGATGGGGAAATTGATAAGTTGTCTTATGACTCAATGACTGCACAACATCAGGCAGCAGAACAAGATGAAGATCAAGAGGAAGATGGGATCGATTCTGCTGGACAAGATAAGATAACTGAAGATGAAACAGGAGAATTAAGTGAGAAAGATAATGATGACATTGCAGAAGTATCTGAGAAGGCTGAAAGTGAAACTGCAGAAGATAGACAACCTGCAAAAGATGAAACTGATGAAGGTGACTCAGTTATT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa12624
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000122595 | Nonsense | 2773 | 3919 | 3 | 3 |
| ENSDART00000138888 | None | None | 81 | None | 2 |
| ENSDART00000122595 | Nonsense | 2773 | 3919 | 3 | 3 |
| ENSDART00000138888 | None | None | 81 | None | 2 |
Genomic Location (Zv9):
Chromosome 20 (position 19217146)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 20 | 19245403 |
| GRCz11 | 20 | 19144986 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GAAAAATACTCCAGWTAAAAAAATYGTCTCCAGCCAATGAAAAGATTGAG[G/T]AGAACGCCAGTACATCTACGTCCAGTAAGATGGAGGAAGAAAATGTGGKG
Long Flanking Sequence:
AAAAGCAATTTATGACTCATTATGTGGATGCAATGGCTGAGTTTAAAGTCCGTTGGAATCTGGATGAAAACGAGCAGCTTGACACTATGATATCCGAATTGCAAGATGAAGTCCAGAGACGCATACAATATAGTATTGACAAGGAGCTAAAGAAGATCCATGGCAGAGCTGGCAGGCCAAAGCCACCAAAAGAAACAATATCCCGTGAATCAACCATTCAAACAGAGCAAAGGCGGAGGCGTCTGAAGGTGATGCGTAACCAATCTATTGATCCACAACCTGCTAAAAGTGACGATGACTACACAATGACAGGCACAGATTTCAGCGATCAACGTAGTGATGATGAATATTGTCCTTGTGAATCATGCTTAAAAAAGAAAATGGCATCAAAGCCTGTGTTACCTGTGGAAATACTGAATTCAGCACCTGTGATGATGGACTTTGATTTGAGAAAAATACTCCAGATAAAAAAATCGTCTCCAGCCAATGAAAAGATTGAG[G/T]AGAACGCCAGTACATCTACGTCCAGTAAGATGGAGGAAGAAAATGTGGGGCTTGAGGCTGTAAAAGAGGAGGAGGAGAAAGAGGGAGGAGAAATTATTTTTTCTGGTATCCAAGAAATTAGGGAACGAAAAAGTGAGGAGGGTGATGAGGAAGACAATGCCTCCAGCACTTATGTAGAAGATAGTTCTGAGAAACAGTCGAATGCACCTAGTCAATTACGGGCAGTTGTGGATGATGATGATGATGATGATGATGGGGAAATTGATAAGTTGTCTTATGACTCAATGACTGCACAACATCAGGCAGCAGAACAAGATGAAGATCAAGAGGAAGATGGGATCGATTCTGCTGGACAAGATAAGATAACTGAAGATGAAACAGGAGAATTAAGTGAGAAAGATAATGATGACATTGCAGAAGTATCTGAGAAGGCTGAAAGTGAAACTGCAGAAGATAGACAACCTGCAAAAGATGAAACTGATGAAGGTGACTCAGTTATT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa43409
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000122595 | Nonsense | 2989 | 3919 | 3 | 3 |
| ENSDART00000138888 | None | None | 81 | None | 2 |
Genomic Location (Zv9):
Chromosome 20 (position 19217794)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 20 | 19246051 |
| GRCz11 | 20 | 19145634 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AAGCTACAGTAGATGGGGAATCAGTTGAGGAAAAAACATCAGATGGTGGA[C/T]AAGCTGCTGAAGATAAAACTTCAAAAGATGGACAAACTGCTGATGATGAA
Long Flanking Sequence:
AGGAAGACAATGCCTCCAGCACTTATGTAGAAGATAGTTCTGAGAAACAGTCGAATGCACCTAGTCAATTACGGGCAGTTGTGGATGATGATGATGATGATGATGATGGGGAAATTGATAAGTTGTCTTATGACTCAATGACTGCACAACATCAGGCAGCAGAACAAGATGAAGATCAAGAGGAAGATGGGATCGATTCTGCTGGACAAGATAAGATAACTGAAGATGAAACAGGAGAATTAAGTGAGAAAGATAATGATGACATTGCAGAAGTATCTGAGAAGGCTGAAAGTGAAACTGCAGAAGATAGACAACCTGCAAAAGATGAAACTGATGAAGGTGACTCAGTTATTGACACAGCAGAAGAGAATGAGGCAGCTGAAAGTGAAAGTGCAGATGGACAAACTGCTGAAGACAAAATTAAACAAGATAAACAAACCGACGAAGATCAAGCTACAGTAGATGGGGAATCAGTTGAGGAAAAAACATCAGATGGTGGA[C/T]AAGCTGCTGAAGATAAAACTTCAAAAGATGGACAAACTGCTGATGATGAAACTGCAGAAGACGAACACATTATTGAAGATGAAACTGCGGAAGAAATTGAAAAATTTGAAGATAAATCTTCAGATGATGGACAATCTGCTGAAGATAAAACATCAGAGGATGGACAAACTGCTGATGAAGAAACTGCAGAAGATAAACACTTTACTGAAGATGAAACTGCTGAAGAAATTGAAAATTTTGAAGTTAAAACTTCTGATGATGGACAAAACGCTGAAGATAAAACTTCAGATGATGGACAAACTGCTGAAGATAAAACATCAGAGGATGGACAAACTGCTGATGAAGAAACTGCAGAAGATAAACACTTTACTGAAGATGAAACTGCTGAAGAAATTGAAAATTTTGAAGTTAAAACTTCTGATGATGGACAAAACGCTGAAGATAAAACTTCAGATGATGGACAAACTGCTGAAGATAAAACATCAGAGGATGGACAAACT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa14900
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000122595 | Nonsense | 3252 | 3919 | 3 | 3 |
| ENSDART00000138888 | None | None | 81 | None | 2 |
Genomic Location (Zv9):
Chromosome 20 (position 19218583)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 20 | 19246840 |
| GRCz11 | 20 | 19146423 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AAGATCAAACTTCACATGATGGACAAACTGCTGAAGGTGAAACTGCAAAG[G/T]AAAGTGAAACAGTTGAAGATGAAACTGCAGAAGGTGTACACACTGCTGAA
Long Flanking Sequence:
ATGATGGACAAACTGCTGAAGATAAAACATCAGAGGATGGACAAACTGCTGATGAAGAAACTGCAGAAGATAAACACTTTACTGAAGATGAAACTGCTGAAGAAATTGAAAATTTTGAAGTTAAAACTTCTGATGATGGACAAAACGCTGAAGATAAAACTTCAGATGATGGACAAACTGCTGAAGATAAAACATCAGAGGATGGACAAACTGCTGAAGATGAAACTGCAGAAGATGGAAAAATTACTGAAGATGAAAAAGCAGAAGAAATTAAAAATTTTGAAGACAAAACTTCAGAGGATGGACAAACTGTTGAAGATAAAACTTCAGATGACGGACAAACTGCTGAAGACAAAACATCAGAGGATGGACAAACTGCTGATGAAGACACTGCAGAAGATGAACACCTTACTGTAGATGAAGAAACTGCAGAAGAAATTGAAAAATTTGAAGATCAAACTTCACATGATGGACAAACTGCTGAAGGTGAAACTGCAAAG[G/T]AAAGTGAAACAGTTGAAGATGAAACTGCAGAAGGTGTACACACTGCTGAAGGTGAAACTGCAGAAAAATGTGAAACCCCTGAAAATCAAACTTTGGAAGATGGTCAGATAGCTGAAGATGAAATTGCAGACCAAGGTGAATCAGTAAATGGTGACACTGCAGAAGACCAGGAAATGGCTGAAAACAAAACTGTGGAAGATCAAGAAACTGCTGAAGATGAAACTACAGACGATAAAACTACAGAAGATGGACAAACTGCTGAAGATAAAACTTCAGAAGATGGACAAACTGCTGAAGATAAAACTTCCGAAGATAAAAATTCAGAAGACGGACAAACTGCTGAAGATGAAACTGCTGATGATAAAAATTCAGAAGATGGACAAACTGCTGAAGATGAAACTGCTGATGATAAAACTTCAGATGATGGACAAAGTGCTGAAGATGGAGATGCAGAAGACATACAGACCACTGAAGATGATGCTGCACTGAAAGGTGCAACA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa23668
Status:
Available for shipment
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For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000122595 | Nonsense | 3578 | 3919 | 3 | 3 |
| ENSDART00000138888 | None | None | 81 | None | 2 |
Genomic Location (Zv9):
Chromosome 20 (position 19219561)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 20 | 19247818 |
| GRCz11 | 20 | 19147401 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGACTTCTGAAGCAGAATCAGAAGATGAAGGAACCACCAATGCAGAATCT[G/T]AAATGCATGAAGGGAAAGCTACTGAAGATGGATCAACAGAACAAGATGAG
Long Flanking Sequence:
ATGCTGCACTGAAAGGTGCAACAGTTGAAGATAAAATATACGAAAATAAAATTGCTATAAAAGATGAAACAACTGAGGATGGAACTGCAGACGAGTGTGAAACATCTTCTAAAATTGAGTCTGTAGAAGATGAAGAGATAGCTGAAGCTGAAAGTGTAGAAGAGAGCAACAGAAGCAATGATGAAACTGCAGAAAATGGTGAGACAGCTAACAACAATAACAACAACAATGCAGAAGATACGCAGACTGATGAAGCTGACACTGCAGAAGAGAGTGATACAGGTTATGAGGACACCACAAAAGACAGTGAGACGGCTGAAGATGAAACTGCTGAGGGGACATCAGCTGAAGAAAGAGGAACTGAGGAACAAAGAGCAGATGATGATGATGAGACTGGAGAAAACACTGATGATGTTGACAATACAGGAGATGTCTCAGCTGAGGAAAAGGAGACTTCTGAAGCAGAATCAGAAGATGAAGGAACCACCAATGCAGAATCT[G/T]AAATGCATGAAGGGAAAGCTACTGAAGATGGATCAACAGAACAAGATGAGAATGCTGAGATAGAGCCATCAGAGCAAACTCCTGATCATGAAACAACTGCAGAAGACACTGACAGGAGTCAAACAGAGGGTGAAGATGAGGACACTGTCAGTTGTGAAGCAGCAGATGTTCTTTCTAACATTGAGGACACAGAGAGTCAAGATGTTTCAACTAATCTTGAGGTTGTTGATGGAGATGAAGAAAGTGATAAAGAAGAAAACGACTTGGCAAAAAAAGCTGGTCTTGTTTTCAATAATGGCGAATCAGCTGAAGCTGGTGACGAAGCTGAGGATGAAACTGAACCAGATATGGAGACAGATGAAGGGGAACGTGATGGGAACACTCCAAATTTACAGCCCATGTTACAGCCAAAGCAAAAAGATGGCAAACCAGATGGAGCAGCTTCATTAAATGTTTTGATAAACCACAACTCTGAGTCTGAGGATGGTGCATATGCTGAT
Associated Phenotype:
Not determined