ZMP
si:dkey-126h10.1
Ensembl ID:
ZFIN ID:
Description:
Novel protein similar to vertebrate solute carrier family 32 (GABA vesicular transporter), member 1
Human Orthologue:
SLC32A1
Human Description:
solute carrier family 32 (GABA vesicular transporter), member 1 [Source:HGNC Symbol;Acc:11018]
Mouse Orthologue:
Slc32a1
Mouse Description:
solute carrier family 32 (GABA vesicular transporter), member 1 Gene [Source:MGI Symbol;Acc:MGI:1194
Alleles
There are 3 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa8973 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa12972 | Essential Splice Site | Available for shipment | Available now |
| sa23622 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa8973
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000109269 | Nonsense | 60 | 400 | 2 | 4 |
| ENSDART00000136645 | Nonsense | 60 | 397 | 2 | 3 |
Genomic Location (Zv9):
Chromosome 20 (position 1748328)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 20 | 1704193 |
| GRCz11 | 20 | 1778539 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TCTGCAGCTACACTGGTAAGATCCTGGTGTCCTGCTTGTAYGAAGAGGAT[G/T]AGAGCGGCTGCCCGGTCCGCGTAAGACACACCTACGAGGACATCGCTAAT
Long Flanking Sequence:
CAGCAAACTTCAGCAAGTCATTCTCATTTGCTGAATTTGAAGTCACGTCTGAATCAGCCGTTTTCCTGAAGTAACTTCTGGGGCCTGACCGGGCCGTGTCTGAACTTTTGTGATGACTCCATGTTGCGATTTACCTGTGTAATTTTGACTTGTCTTTCTCTTTCCCACAAAACTGCACAGGTTGTGTGATGTTTGATTTGGGGGGCGTACTTAGGGAAGGGTTTTCATGCTGCACTTTGACCTTGACCTTGACCTTACAGTTCAATTGCACACATTGTCCTGGCTCACATTGGTCAGACAGTGTAAAAGTAGCTATTGTTGCCTTCTTACTTTGAGTACTTGACTAAGCACTGCTTTTGTCTCCTCAGGGTCTCTTTGTGCTGGGTCTGCCCTATGCCCTGCTGCAGAGCGGCTACCTGGGTCTGCTGTTGCTGGTGCTAGCCGCCCTCATCTGCAGCTACACTGGTAAGATCCTGGTGTCCTGCTTGTATGAAGAGGAT[G/T]AGAGCGGCTGCCCGGTCCGCGTAAGACACACCTACGAGGACATCGCTAATGCTTGCTGCAGACACATCTGCCCGTGCATCGGGGGAAAGGTTGTGAATGTGGCGCAGCTGGTTGAGCTAGTCATGACCTGCATCCTCTACTTGGTTGTGAGCGGTAATCTGATGTGCCACAGCCTGTTTTTCCTGCACCTGAGCCCGACGACCGGCTCCGCCATCAGCTTTCTGATCCTACTGCCCTGCATGCTGATCCGAGACCTGAGGGTGGTGTCCCGCCTCAGCCTCTTCTGCTCGCTGGCTCAGTTCCTCATCACCTTCATTGTGATTGGCTACTGTGTGCGCCAGTCTCCGCAGTGGGCCAGCAGAAGTCTGCGTGCAGATGTGGTGGACTTTGATGGCTTTCAGGTGGCGGTGGGGGTGATTATCTTCAGCTACACCTCACAGATCTACCTGCCCACGTTGGAAGAGAGCATGATGGACCGGCTGGACTTCAACACCATGATG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa12972
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000109269 | Essential Splice Site | 254 | 400 | 2 | 4 |
| ENSDART00000136645 | Essential Splice Site | 254 | 397 | 2 | 3 |
Genomic Location (Zv9):
Chromosome 20 (position 1747742)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 20 | 1703607 |
| GRCz11 | 20 | 1777953 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GGCCTTCTCTGTGCTGGYCTTCCTAACKTGGGGAGAGGAAACTAAAGAGG[T/C]GCGCTGATCTCACATGMCTGTAGACATCGCTAAMGTCCTGATATACTTCA
Long Flanking Sequence:
AAAGGTTGTGAATGTGGCGCAGCTGGTTGAGCTAGTCATGACCTGCATCCTCTACTTGGTTGTGAGCGGTAATCTGATGTGCCACAGCCTGTTTTTCCTGCACCTGAGCCCGACGACCGGCTCCGCCATCAGCTTTCTGATCCTACTGCCCTGCATGCTGATCCGAGACCTGAGGGTGGTGTCCCGCCTCAGCCTCTTCTGCTCGCTGGCTCAGTTCCTCATCACCTTCATTGTGATTGGCTACTGTGTGCGCCAGTCTCCGCAGTGGGCCAGCAGAAGTCTGCGTGCAGATGTGGTGGACTTTGATGGCTTTCAGGTGGCGGTGGGGGTGATTATCTTCAGCTACACCTCACAGATCTACCTGCCCACGTTGGAAGAGAGCATGATGGACCGGCTGGACTTCAACACCATGATGGACTGGACTCACGCTCTGGCCTGTGTCCTGAAGACGGCCTTCTCTGTGCTGGCCTTCCTAACGTGGGGAGAGGAAACTAAAGAGG[T/C]GCGCTGATCTCACATGACTGTAGACATCGCTAACGTCCTGATATACTTCAAATTAAATTGAAGAATTAACTGAAACATTATAATGTATTATTTTGAAATCTGGCCAATCATTTCAAGTTTAAGTTTTGTGTTTTGTTTTTGTTTTTTGACACCTTTGAGCTACATTTGGCCTAACCCTAACCCTAATATGAGCCAACTGGTTTAATCATGAGCACGTACTCCTCTCGAAATTATTTTAATAAATTAAACTTCACTTCATGTAAAGCACTTTTAATTACCATTGTGTATGATGTGCTAAAAATAAACTTGCCTTGCCTTGCCTTTAAGTCAGGGGTGTCCAAAGTCGGTCCTGCAGATTTTACCTCCAACTTGCCTGAACACACCTTCAAGGATGTTTCTAGAAAGCCTATAAGAGCTTGATTAGCTAGCCTAGGTGTGTCTGGTTGGGGTTGGAACTAAACTTTGCAGGACACCGGCCCTCCAGGACCGAGTTTGGACAT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa23622
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000109269 | Nonsense | 388 | 400 | 3 | 4 |
| ENSDART00000136645 | Nonsense | 388 | 397 | 3 | 3 |
Genomic Location (Zv9):
Chromosome 20 (position 1746807)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 20 | 1702672 |
| GRCz11 | 20 | 1777018 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCTTACTGCTGGGCGGATTCTGCAGCGTCTCCGGGGTCATCTGCTCCATC[A/T]GAGGGATGATAACCGCCTTTGAGGACAAGTAGATAACACGTCGTCCTGTC
Long Flanking Sequence:
TGTGTCTGGTTGGGGTTGGAACTAAACTTTGCAGGACACCGGCCCTCCAGGACCGAGTTTGGACATGCCTGCTTTAAGTGGACTTTTATTATTATTTTCAGGTGATAACAGATAACCTGCCCTCTGCTCTGCGTACCGTGGTGAATCTGTGTCTGCTGGCGAAGGCTCTGCTCTCGTACCCGCTGCCATTCTATGCTGCGGCAGAAATACTGCAGACAGGCCTCCTGAAACTGGACTCCGGGTCTGAGCGGTGGACGCTGCTGCTGCTGCGTGGTTCTCTGCTGCTGCTCACCCTCCTCATGGCACTGTTCGTGCCCCGCTTTTCCCTCCTCATGGGCCTGACGGGCAGCGTGACAGGGGCGGCCATGACTCTGCTGCTGCCTGCTCTCTTCCACCTGCAGCTGAAGTGGACGCAGCTGGACCTGAGCCGGAGAATGCTGGACCTGCTGATCTTACTGCTGGGCGGATTCTGCAGCGTCTCCGGGGTCATCTGCTCCATC[A/T]GAGGGATGATAACCGCCTTTGAGGACAAGTAGATAACACGTCGTCCTGTCTGCCTCAAGGTTATTTTAGTAAACAACAACTCAGGCCTGTCCATATGAACACAGGTGTTTTCAAAGCAGCAGTTTTGCTGTTTGCCGACGGATCCACAATGCAGTTCGCCAACGGCGAAGTGAATGGGAAGCGTTAACACTTGACGCCCTGTGTGAATGAGGCATTAATGTAATGTAAGAGTTGATGTAAGTCTATGTAATGTGCAAAAACACTAAACCTCACTCTGGTCAACATTGGATGTGTACTTGTGAAAACTGAAACTAAATATATATAAAAACACAGAGAAACACAGCAAAAATGCTTTCCTTATTTCAATTTTTTGTCTTGGTTTTAGTACAAATATTCAAATCAAGAAGCATTTTCTAGATTAGCAAAAAAGTTTTTGTTTAAAGAAATAATATGCTAAAATAGTGTTTTATGTTAAAACTAGTAAAATAATTTGCCAACGT
Associated Phenotype:
Not determined