ZMP
prdm1b
Ensembl ID:
ZFIN ID:
Description:
PR domain containing 1b [Source:UniProtKB/TrEMBL;Acc:A5XCE7]
Human Orthologue:
PRDM1
Human Description:
PR domain containing 1, with ZNF domain [Source:HGNC Symbol;Acc:9346]
Mouse Orthologue:
Prdm1
Mouse Description:
PR domain containing 1, with ZNF domain Gene [Source:MGI Symbol;Acc:MGI:99655]
Alleles
There are 5 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa23609 | Nonsense | Available for shipment | Available now |
| sa43356 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa12402 | Nonsense | Available for shipment | Available now |
| sa18430 | Nonsense | Available for shipment | Available now |
| sa7302 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa23609
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000130671 | Nonsense | 24 | 377 | 2 | 3 |
Genomic Location (Zv9):
Chromosome 19 (position 50152156)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 19 | 48516996 |
| GRCz11 | 19 | 48177786 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GGGCAGTTGCAGCACTTCATTGACGGTTATGATGTCCGGCTCAGCAACTG[G/A]ATGCGTTACGTTAACCCGGCGCGCTCGCTGGCCGAACAGAACCTGGTGGC
Long Flanking Sequence:
ATGTTAAATAATTCTGATTTTAAGCATTAATAATGTTAAATAATTCTGATTTTAGGCATTAATAATGTTAAATAATTCTGAATTAGTTTAGTTTTGTAGTTTTAAGCATTAATAATGTTAAATAATTCAGATTTTAAGCATTAATGGTGTTAAATAATTTTAATTTTGTTTGGTTTTGTTATTTTAAGCATTAATAATGTTAAATAATTATGATTTTAGGCATTAATAAAGTTAAAGAATTTAGATTTTAAGCATTAATTATGTTAAATAATTATGAATTACTTTTGTTTAGTTGTTTTAAGCATTATTATTGTTAAATAATTCTGATTTTGTTTGGTTTTGTTATTGCAAGCATTATTGGCATTAAATCCATCAGATATTTATATAGATATTTAAATGCATTAATGTGTGTCTCTTTCTCGGTCTCTCCTAACACAGATCTACAGTGGTGGGCAGTTGCAGCACTTCATTGACGGTTATGATGTCCGGCTCAGCAACTG[G/A]ATGCGTTACGTTAACCCGGCGCGCTCGCTGGCCGAACAGAACCTGGTGGCGTGTCAGAACGGGCCGGATATCTTCTTCTACACCCTGCGGCCGCTGGAGCCCAAGCAGGAGCTGCTGGTGTGGTACAGCCCCGAGTTCAGCCAGAGACTCTGTGGACAGCAGGAGACGACAGACAGCACAAGCACAAGTCAGTCAATAACAAAACATGCTAAACCATCTTATAGTTGTTTATAGCAGCGCTTTCTCTGGAAAAAAAAATAGAGGTTTTATTCAATGTGGAATTTAAAGTGTAGCTCAAATATGTCACTTTGGACAAAACACCAAATGACTTAATGTAAATGTAAACGTAGTATGGTCAAATTGTTTCCTTAAATGTCTTGATAACATCACCTTCTTCAGACTGTCACATTATTAGTCATCCGCTCTGATATTGCTTTTGTTTCTCTGCAATCTAAAATGTGCAGATGTCTTCATTTTGGTGTTCTTATTACATTTTAATT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa43356
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000130671 | Nonsense | 107 | 377 | 3 | 3 |
Genomic Location (Zv9):
Chromosome 19 (position 50144591)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 19 | 48524561 |
| GRCz11 | 19 | 48185351 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CAGATATGGAGTACCAGAAGCCTCCTCTACCTCAGTACACATATTACCCC[A/T]AACACCCCTCGAACCCACAAAACCATCCCTGCGACACAAATAAAGACGAC
Long Flanking Sequence:
ACGATGAGCTAACCGGACAAACTGGTTGTGGTGGGAAAGCCATCCACCAGAGTTGAGCCGTCAGCCGGTGAGCACGAAGAGGAGTGGCCTCACACCGGCCAATAGCATTCACTTCAAAAAACTAAATGCAGCCATACGTACCTCCAGCGGTAAATCGCGGTCTCTAGAAACATCCGCAGGGCTACGCTTTCAGAATGAGCTTGGGTTGACTAAATTGGCTTCAGTATATGAGTGTGTGTGTGTGTGTGTATGTGTGAATGAGTGTGTATGGGTGCTTCCCAATACTGGGAAGGACATTCACTGTGTAAAACATTGCTGGAATAGATGGCGGTTCATTCCACTGTGGTGACCCCTGATAAATAAGGGACTAAGCTGAAGGAAAATGAATGAGATCAGTGACATACATGATTAATAACCCTCTCTCTCTCTCTCTCTCCACAGAGTACACATCAGATATGGAGTACCAGAAGCCTCCTCTACCTCAGTACACATATTACCCC[A/T]AACACCCCTCGAACCCACAAAACCATCCCTGCGACACAAATAAAGACGACGAGGAACCTGAAGAGAAGATCGACATCGAGAGAGACACGCCGCCAGACACTCCAGACGAGCAAATAATGGACTTCAGCAAGAAGATCCACAAGTCAGAACCAATGCATGAAAAAACAAACATTTACCCGAGCCTGTCTCCACCGCAGGACGTCCCGCTGCATCTACACAGCCTGTACGGTCACCGAGAGGGTTTGATCTCCTCATATCCGTCAATACGGTCTCCATATCCGCTCTTACCGCAGTATAACCCTCATTACCAGCACATGCTCATTCCTCCATACTCTCCTCCGTTCACTTCAATGCTTCCCACAAAACCAGCCCACCGATACGGCTTCATGAATCCTGACGGTTTGTCCTATCCTTCAATACCACAGTCAGGTTTATTACCTGTATCTCTTCCATATCCTAACACACTCCACGGAGGATTAAACGAAAGGGGGCACAATACT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa12402
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000130671 | Nonsense | 199 | 377 | 3 | 3 |
Genomic Location (Zv9):
Chromosome 19 (position 50144313)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 19 | 48524839 |
| GRCz11 | 19 | 48185629 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GGTCACCGAGAGGGTTTGATCTCCTCATATCCGTCAATACGGTCTCCATA[T/A]CCGCTCTTACCGCAGTATAACCCTCATTACCARCACATGCTCATTCCTCC
Long Flanking Sequence:
CCAATACTGGGAAGGACATTCACTGTGTAAAACATTGCTGGAATAGATGGCGGTTCATTCCACTGTGGTGACCCCTGATAAATAAGGGACTAAGCTGAAGGAAAATGAATGAGATCAGTGACATACATGATTAATAACCCTCTCTCTCTCTCTCTCTCCACAGAGTACACATCAGATATGGAGTACCAGAAGCCTCCTCTACCTCAGTACACATATTACCCCAAACACCCCTCGAACCCACAAAACCATCCCTGCGACACAAATAAAGACGACGAGGAACCTGAAGAGAAGATCGACATCGAGAGAGACACGCCGCCAGACACTCCAGACGAGCAAATAATGGACTTCAGCAAGAAGATCCACAAGTCAGAACCAATGCATGAAAAAACAAACATTTACCCGAGCCTGTCTCCACCGCAGGACGTCCCGCTGCATCTACACAGCCTGTACGGTCACCGAGAGGGTTTGATCTCCTCATATCCGTCAATACGGTCTCCATA[T/A]CCGCTCTTACCGCAGTATAACCCTCATTACCAGCACATGCTCATTCCTCCATACTCTCCTCCGTTCACTTCAATGCTTCCCACAAAACCAGCCCACCGATACGGCTTCATGAATCCTGACGGTTTGTCCTATCCTTCAATACCACAGTCAGGTTTATTACCTGTATCTCTTCCATATCCTAACACACTCCACGGAGGATTAAACGAAAGGGGGCACAATACTCCCCCCAGAGGAGCGCCTGCAACGCCAGAACTTTCCCCTCAGACTTCTCCTTGCCAGACGCATTATTCTGAATGTGAAGAAGCCATAAATCTGAGTCTGACTACACCTAAGAGCACACCGCCTCCGTCAGCCTCTCCAGCCATGATTCCTGGGTATAAATCTCTCCCGTATCCACTGAAAAAGCAGAACGGGAAGATCAAATATGAATGCAATGTCTGTATGAAGACTTTCGGACAGCTCTCCAATCTTAAAGTGAGTACAATGTGTGTGTTTAAATG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa18430
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000130671 | Nonsense | 346 | 377 | 3 | 3 |
Genomic Location (Zv9):
Chromosome 19 (position 50143872)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 19 | 48525280 |
| GRCz11 | 19 | 48186070 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TATCCACTGAARAAGCAGAACGGGAAGATCAAMTATGAATGCAATGTCTG[T/A]ATGAAGACTTTCGGACAGCTCTCCAATCTTAAAGTGAGTACAATGTGTGT
Long Flanking Sequence:
AGCCTGTACGGTCACCGAGAGGGTTTGATCTCCTCATATCCGTCAATACGGTCTCCATATCCGCTCTTACCGCAGTATAACCCTCATTACCAGCACATGCTCATTCCTCCATACTCTCCTCCGTTCACTTCAATGCTTCCCACAAAACCAGCCCACCGATACGGCTTCATGAATCCTGACGGTTTGTCCTATCCTTCAATACCACAGTCAGGTTTATTACCTGTATCTCTTCCATATCCTAACACACTCCACGGAGGATTAAACGAAAGGGGGCACAATACTCCCCCCAGAGGAGCGCCTGCAACGCCAGAACTTTCCCCTCAGACTTCTCCTTGCCAGACGCATTATTCTGAATGTGAAGAAGCCATAAATCTGAGTCTGACTACACCTAAGAGCACACCGCCTCCGTCAGCCTCTCCAGCCATGATTCCTGGGTATAAATCTCTCCCGTATCCACTGAAAAAGCAGAACGGGAAGATCAAATATGAATGCAATGTCTG[T/A]ATGAAGACTTTCGGACAGCTCTCCAATCTTAAAGTGAGTACAATGTGTGTGTTTAAATGTGTTATATCACCTATTTTAAAAGTGAAGATATACTAAAGGTTAACTCTGTATTTATCTTGCTGAAGGCAAAATTATTTGTCAATAATAAAGGGAATAGAAGTGAACGTGTATTCTGAAAATGTTTTTAGATTTTTTAATATGTTTTTAATTTAATTTGTTTTTATTTGTACTGTTTTGTTTGATTTATTTTTGTTTGTTTGATTTATTTGTTATCAAATAATGTTTGTTTTATATATTTTTTGTGCTGTTTTGTTTCTGTTTTTGTTGTTTTTATTATTTTTGTTCATTTTTTACTTGATTTTTTTTATTTTTTTATTTTTTTATTTGTAGTATTTTGTTAAATTTTTTGTTTATTTTTTATTTATTTTAATTTAATTGAACTTTAATTTATGTGATAACATTTTTATTTTATTTTATTTTTTATTATTGAATTTATTTAT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa7302
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000130671 | Nonsense | 372 | 377 | 3 | 3 |
Genomic Location (Zv9):
Chromosome 19 (position 50143795)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 19 | 48525357 |
| GRCz11 | 19 | 48186147 |
KASP Assay ID:
554-4758.1 (used for ordering genotyping assays)
KASP Sequence:
TCTTAAAGTGAGTACAATGTGTGTGTTTAAATGTGTTATATCACCTATTT[T/A]AAAAGTGAAGNNNATATACTAAAGGTTAACTCTGTATTTATCTTGCTGAAGGY
Long Flanking Sequence:
TAACCCTCATTACCAGCACATGCTCATTCCTCCATACTCTCCTCCGTTCACTTCAATGCTTCCCACAAAACCAGCCCACCGATACGGCTTCATGAATCCTGACGGTTTGTCCTATCCTTCAATACCACAGTCAGGTTTATTACCTGTATCTCTTCCATATCCTAACACACTCCACGGAGGATTAAACGAAAGGGGGCACAATACTCCCCCCAGAGGAGCGCCTGCAACGCCAGAACTTTCCCCTCAGACTTCTCCTTGCCAGACGCATTATTCTGAATGTGAAGAAGCCATAAATCTGAGTCTGACTACACCTAAGAGCACACCGCCTCCGTCAGCCTCTCCAGCCATGATTCCTGGGTATAAATCTCTCCCGTATCCACTGAAAAAGCAGAACGGGAAGATCAAATATGAATGCAATGTCTGTATGAAGACTTTCGGACAGCTCTCCAATCTTAAAGTGAGTACAATGTGTGTGTTTAAATGTGTTATATCACCTATTT[T/A]AAAAGTGAAGATATACTAAAGGTTAACTCTGTATTTATCTTGCTGAAGGCAAAATTATTTGTCAATAATAAAGGGAATAGAAGTGAACGTGTATTCTGAAAATGTTTTTAGATTTTTTAATATGTTTTTAATTTAATTTGTTTTTATTTGTACTGTTTTGTTTGATTTATTTTTGTTTGTTTGATTTATTTGTTATCAAATAATGTTTGTTTTATATATTTTTTGTGCTGTTTTGTTTCTGTTTTTGTTGTTTTTATTATTTTTGTTCATTTTTTACTTGATTTTTTTTATTTTTTTATTTTTTTATTTGTAGTATTTTGTTAAATTTTTTGTTTATTTTTTATTTATTTTAATTTAATTGAACTTTAATTTATGTGATAACATTTTTATTTTATTTTATTTTTTATTATTGAATTTATTTATTTATTTTTATGTATGTATTTATTTATTTGTTTTAATTTAATTTAATTTAGTTTAATTTAATTTAATTTAATTTAATT
Associated Phenotype:
Not determined