ZMP

cthrc1a

Ensembl ID:

ENSDARG00000087198

ZFIN ID:

ZDB-GENE-040808-22

Description:

collagen triple helix repeat-containing protein 1 [Source:RefSeq peptide;Acc:NP_001003765]

Human Orthologue:

CTHRC1

Human Description:

collagen triple helix repeat containing 1 [Source:HGNC Symbol;Acc:18831]

Mouse Orthologue:

Cthrc1

Mouse Description:

collagen triple helix repeat containing 1 Gene [Source:MGI Symbol;Acc:MGI:1915838]

Alleles

There is 1 allele of this gene:

Allele Name	Consequence	Status	Availability
sa23483	Nonsense	Available for shipment	Available now

Mutation Details

Allele Name:

sa23483

Status:

Available for shipment
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Availability:

Order Allele From ZIRC

Mutation:

T > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000123978	Nonsense	97	231	2	4
ENSDART00000132892	Nonsense	49	183	1	3

Genomic Location (Zv9):

Chromosome 19 (position 13540199)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	19	12998545
GRCz11	19	12918073

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

TGTGTGTCGGAGAGGTTTGAGGAACCCTGGAAGCCCAACTTTAAACAGTG[T/A]GCTTGGAATTCATTAAACTATGGCATTGATCTGGGCAAAATCGCTGTAAG

Long Flanking Sequence:

AACAGTTTTGCACATATATGTCATATTGTATGAACCCACTTTATATATAAATGCCTGATACTGCTATTGCTTTGTCAGAGCGTGAATGAAGTAAACAGGCTGTGACTGTGGTCAGGGGATTTTACGCAAGTCAATTTCATCCAATTTTATGTTTTCATTGTTTTTCCCATTTCACCACAAACGTGTCCATGTCACACGGTCATGGTCTTTTCCCACCCACAGCAGTCTGTGCATCATAGTGAATCACTGGCCATATTTAACAAGGCAAAACTCTCTGACAAGTAATGAACTAGTTTCATGCCCATTTGTGTATGTTTTTGTCATTAGTACCAGGCATGCGTGCAGGGTGTCCCTGGAGTACAGGGCAGAGATGGGAATCCAGGGATAAATGGCATTCCAGGAACACCAGGAATCCCTGGGCGAGACGGGCTTAAAGGCGAGAAAGGAGAGTGTGTGTCGGAGAGGTTTGAGGAACCCTGGAAGCCCAACTTTAAACAGTG[T/A]GCTTGGAATTCATTAAACTATGGCATTGATCTGGGCAAAATCGCTGTAAGTATGTATAATCTTAATGAATGAGTTAAGATTCCCGCAAGGTAAATCATTTAAAGTCTACAGTCTGTTCATGGCCACTCAGTTTTGAGAATAAGAGTTCTGGAGTTTCAGGAAATTACATCATCACTACATTGATTTGCTGATAACACTGCAATAACATAGACATAACATAGTCTTTTCTTTGACTAGTTACCAGAAAAAGCTAGAAGAGGCTAACAGTGATGTGCTAACCAGCTATTTGTAAATTTCTGTCTAAAATCAGTTTTTTAAAGACAAAAACAAAAATGTTTTAAATTGTGAAGTGTTTTGAAACATGTGCGCAGTCTCATACAAAAATGCTACTTTTTAATAGCAAACATTAAGTTGGACTAGACTGTTATTTTTATAATGCTTCAATAATCCTTTATTTATTTTTTTATGGCGAGGGTGGGGGGTTGTTTATCTGGAGAGAC

Associated Phenotype:

Not determined