ZMP
ctdp1
Ensembl ID:
ZFIN ID:
Description:
RNA polymerase II subunit A C-terminal domain phosphatase [Source:RefSeq peptide;Acc:NP_001002873]
Human Orthologue:
CTDP1
Human Description:
CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1 [Source:HGNC
Mouse Orthologue:
Ctdp1
Mouse Description:
CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1 Gene [Source:
Alleles
There are 6 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa36797 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa43245 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa23474 | Nonsense | Available for shipment | Available now |
sa23473 | Nonsense | Available for shipment | Available now |
sa32238 | Essential Splice Site | Available for shipment | Available now |
Mutation Details
Allele Name:
sa36797
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000111517 | Nonsense | 203 | 951 | 5 | 14 |
Genomic Location (Zv9):
Chromosome 19 (position 12455574)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 19 | 11913920 |
GRCz11 | 19 | 11832262 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATGATCTTGTTTATATTTTTCTTCAGGGAATCTTTCATTTCCAGCTAGGA[C/T]GAGGGGAACCTATGCTTCACACACGACTTAGACCTCACTGCAAAGACTTT
Long Flanking Sequence:
AATAGTTTTGTTACTATTTTTACAGTCTTCAAAATCATAAATAAAGCCTTGCTGAGTATAAGATACTTTTTTTTAATCAATAAATGGTAATCTTACAAAGTCCAAACTGTCACATTATCAAAAATAAAAAACAATGGTCCTTTAGTTAATGTTTTTATTAACATCCACAATTAGTGATACATTTATTACAGGATTTATTCATCTTTGTTAACGTTAATGTAATTTAAGCTAAAAAAACATGTTTATTCCCTTTGCATTAACCATGATTGAATTTTGATAATGCATTAGTAAATGTTGAACTCAATTAATTAATGCAAGATTATTTATACTAAATGTTAATATATTAAGTAATATTAACTAACGGACTATTATTCTAAAGTGTCTAAACTTGTCTAATATTGTTATGCTAGTTTATATATTGTGTCGTTTTCTAGTTAAGTTGATCTTTTCATGATCTTGTTTATATTTTTCTTCAGGGAATCTTTCATTTCCAGCTAGGA[C/T]GAGGGGAACCTATGCTTCACACACGACTTAGACCTCACTGCAAAGACTTTCTTGAAAAGATCGCCAAACTCTTTGAGCTGCACGTCTTCACCTTCGGCAGCCGTTTGTACGCTCACACTATTGCAGGTACATTACTGTCATGTGGCAGACTTTTTTTTTTTTAAATGAAAAATTTGTAAAAAGATTTCTTCTATTCCCTTTATGCTGTGAAACATGAATGATACTTCAGACCTTGAGGAAAGTTACAAATGTATTTTTTTTCTGAGCGTTTCCCCCCCCTTTGCCTAGTGAATGAGAGATCATGTTGTTCTTTTATTATAACACCAGGTGGCAGTATTTGTTCATATTCTTAGCATTTGATGGGTGCAAAGTTTGCTGTGTTTGCATATTTATTACAACAAATTGTAGGATTATGGATATAGAATATGATCATGCTGAATATGTACTTTATAAGTACTACTAAACAGCCAATATGTAAATAGTAGGCTTGCTATAGGCTA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa43245
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000111517 | Nonsense | 348 | 951 | 8 | 14 |
Genomic Location (Zv9):
Chromosome 19 (position 12439061)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 19 | 11897407 |
GRCz11 | 19 | 11815749 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GTAATCAGGGCGGACGGACTGTGGAAGGCACAGAGTCAGGACAAGAGGAA[C/T]AGAGAAATGGCCTTAGAAAATCCAGCAAGGATCATAAAACTGGGCATGAG
Long Flanking Sequence:
GTTAATGCTTTTGAAGTGGCAGACGCCATCATCCCACTCATCTGCACTTTTATATGTTTGATTTTTTTTTTTTTAGCTTGGTTTTGCAATTCTGATTGGGCAGAACGAAAGTGTGCTCACTCAAATGGCTAGTAAGACTGTCACACATAGACGCCATGCACGTGTTTGCTCTGGGTGGGGGAAATGAAATAATACATATTTCATACCGCAGCCTCTTGCAATTAGCTAATCTCAACTTTTGAAATCACGATTGCATTTCGATTTCGGTTAATTGCACAGTCCTATCGCCCTGTATCCAAAATCAGTTTAAAAAACAACACTATAATGCTTTAATAATTTAAAGTAATAATGTGTAGAGTAGAATTGCATTCGAATTTGTAAGACTCTTTATAAACACAAGCTGTTTCTCAAAAGTTGTGTCTAAGAATTCCTTCCGTTGTCATGCTGTAGGTAATCAGGGCGGACGGACTGTGGAAGGCACAGAGTCAGGACAAGAGGAA[C/T]AGAGAAATGGCCTTAGAAAATCCAGCAAGGATCATAAAACTGGGCATGAGGAATCGTCCACTTCTTCCACTGCCACTCAGGGAGCTTCAGCCAATGAAAGGACTCACCCCACTGGGGAACAGCCTAATGAGAGCGCAGATTCAGGGGACAAATGTACTGTGAAAACAGAGGCAGAGGGCAGCTCAGGTGTGTCATGTATCTCAGGTGAAAGTGAAATCCCAAATGCTGCTCCTGATGCTGCTGCTGCCAACGACCTGGATTTTGACCTTTCTAGCGACAGCGAAAGCGAGGGTAAAATGGAATTATCTGACAGCGATGGTGAGGGAAAGACAGCAGACACTGGGAAACCCAAACAAAGAAAAAATGAGGAGTGTAAAAGCAAAGAGGATGATGGAGACAAACAGAGGACAGAGGGGGGTGATGGTCCAGTAACAGATCCTGAGGGTCTCCGTGATTTGGGCAACGGCTGTTCCGACAAAAAGGAAATGGAAACTGAGTCT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa23474
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000111517 | Nonsense | 621 | 951 | 8 | 14 |
Genomic Location (Zv9):
Chromosome 19 (position 12438242)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 19 | 11896588 |
GRCz11 | 19 | 11814930 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGTATCCCACCAACTACCCAATGGAGCGCACCAGAGAGTGGTATCATGGC[A/T]AGGCACTGGGTGCCAAACTTTGCAAGACCTTGGTGCTCAATGCCAAAGAC
Long Flanking Sequence:
GTGAGGGAAAGACAGCAGACACTGGGAAACCCAAACAAAGAAAAAATGAGGAGTGTAAAAGCAAAGAGGATGATGGAGACAAACAGAGGACAGAGGGGGGTGATGGTCCAGTAACAGATCCTGAGGGTCTCCGTGATTTGGGCAACGGCTGTTCCGACAAAAAGGAAATGGAAACTGAGTCTCAAAACAGCGAACAGTCAGGTGTGACTATGGGGGAAGAGTCTTTAGATCACAGTATGGAGGATGAGGATGATGAGGAAGAGGAAGACGTAGACCAGGACGACCACCTCATTTACTTGGAGGAGATTTTAGTTCGCATTCACAATGAGTATTACTCACGCTACGAGGCCTTCCTTAAGAAAGAGAGTTCAGAAAGTCCGGATATACGCAAAATTGTTCCAGAACTAAAGGGCCGTACACTAGCGGGAACCACAGTCATTTTCAGTGGCCTGTATCCCACCAACTACCCAATGGAGCGCACCAGAGAGTGGTATCATGGC[A/T]AGGCACTGGGTGCCAAACTTTGCAAGACCTTGGTGCTCAATGCCAAAGACCCCAACCGGACCACCCACCTCATTGCTGCTCGTGCAGGTGAGTCATGCGTATGCCTAAAACGTACCACTTAAGAATGGGTGTTGTCAAAACAGACTAGTCTTTGGGTTGTTTAAGTGAACTTACTTCTGTAATTGTAATTTTGGCCACTACAGGCAATTTTGTGTTTCATTTTTTAGAGTGTATAATTTACAGCGTATTGTTTATTACACAACGTTTTTCACAGGCAGATAATTTGTTTAATATTATTCAAAGAATACTAATGAGACTCATTACTTTTTGTTATACATGTATAGAGTGAAGATGGACATATGACGTAGATGTGTACTTGATGTCTTACGTTTTAACATTTTAAATTCTAAATGATTAAATGCCATGCTTTACTGTATATCATCGTAATATTGGATTTTTCAATCGTTTTAGTTTTTATTAGGTTTTCAATTTTGAAATTA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa23473
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000111517 | Nonsense | 692 | 951 | 9 | 14 |
Genomic Location (Zv9):
Chromosome 19 (position 12415965)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 19 | 11874311 |
GRCz11 | 19 | 11792653 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GAGCGCTGGGAGCGAGTAGAGGAGCAACTCTTTCCTCTCAAAGAGGACTA[T/A]AACAAATCACACAGGTATTTATCTTTTACAGCCTTCTACTTCTTTTTCCA
Long Flanking Sequence:
TAGGCCACCTCTGCCATTTCATTGACTTACTTTTATTCATGCCTCTGAGACAAAGACGCACTATTTTTTTTATGCGCATATTCAAAATGCACATAAAAATAGGTGGATGAAAACATAGCTACTGTAGCCTGTGCAATTTAGCATTAAAACTTTATTTATATGATAAACTTTGATTGAAAAAAGAAATAGAAAAATGTTTTTTGACTTTTTTAGTAGGTTTTTTTATTGCAACACATTCAATTCAGATTGCAATTTTCTTTTGCTGTGCTGCTGCCTTCTGCTCTGCTGATAGTGGAGAGAAAAACACCGACCGATCATATTTCACATTGCAGTGTGGTTTATCTAAATAGTGTTTTGTTTGTGTCTCTGTCAGGTACAGAGAAAGTTCGTCAAGCTCTGGGTTGTAAACATCTCCATGTGGTAAATCCTGATTGGTTGTGGGCTTGTTTGGAGCGCTGGGAGCGAGTAGAGGAGCAACTCTTTCCTCTCAAAGAGGACTA[T/A]AACAAATCACACAGGTATTTATCTTTTACAGCCTTCTACTTCTTTTTCCATCCTTTATGTTCACTTGTGGCTTTCAGTATGAAGTAGGTATTGTCAGTATTTTCTGTTGTGACTGCTGAAATTTTCATTGTGTTGTTCACTCATCACTACAACGCTCATGAATAGAACATGAAGCATTCAACAACTTATTATTTTTCAGCTTGCACTGACACTTGCAATATTAAAGTAATATTAAATAAATCAGTTTCCCTAAAACTTCCTCATGGCACAGTAAGGGAGATGCTTAGCAGAACGTTGATGTAAAGTGAGCGCTGGCCATGAGTCAAGCAAGATTTTTTCCATCTGCTTGTTTACACATAGATTTCATATTTCTTCAATCGGAACTGAACTATGTGTGTGCAATATGACGATTTTTGATGGAGGATGATTAAAATGTCTCCATGATCTGCTTTGCGAGGTATATCATAATATCGTGCTTCTCATTATACACTATAAAAAAG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa32238
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000111517 | Essential Splice Site | 825 | 951 | 11 | 14 |
Genomic Location (Zv9):
Chromosome 19 (position 12402507)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 19 | 11860853 |
GRCz11 | 19 | 11779195 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGCCGCTCTACACACTCTGTAAAGAAGACCTGGACAGCATGGACAAAGAG[G/A]TTAAACGCACACATACACACACAGACTCTCAGACATAATAGTCATATATT
Long Flanking Sequence:
TGGGTTTAAACAGACCGCAAGAGCACATGCAGTGAGGTTAATCGATTCTTCACTCGCCATCCATTTCCTCGAGCCGAATGATCATAATTATCGTTCCGTGGCTCCTCTGACAGAACTGCAGACGTGATTAAATGTTTGTTGTGTGCTTGCGGACAGGCGTGTGCTGTTTGTCTGTGTTTGATTGCTTATTTAGATGTTCCTCAGTCCGAGCGAGACGCTGTTCGAAGCAAACTCGGCCAGTTTTGCTTGATTGCCGAGTGACTGATTGCGTCGTAAGTTGCTTGACCGGCTGCTGCTCTAGAGTTTGTGTGTTGAGCGATTGATTGTTGATGTGTTTGTTCAGGTCAGCTCAGGGGTCTCAGCAGACAGATGAGCCTGCAGGATCGAGTCCAGACGATGAGCAGCCCGGACCTTCGCGCAGAAAACGACAGCCCAGCATGTCGGAAACCATGCCGCTCTACACACTCTGTAAAGAAGACCTGGACAGCATGGACAAAGAG[G/A]TTAAACGCACACATACACACACAGACTCTCAGACATAATAGTCATATATTCTATCCCTATACCCCAACCCTACCTCTAAACCCAACCCTCACAGGAGATAATCTGCACTTTTACATTTTCAAAAAATAACATTCTGTATGATTTGAGCATGTTTACCTGTAGGTATTTACATTAGATGTCACCTACGCTATTGTTGTCTATTGGAAGGAATGCATCAATAGAGCTGCCATTTTAGTACAGGGTAGCGCTTTGAAATGAATGTGGGACCAAGGTGTAGTGGAGCACTGGCCATCTGGAGCGATCATATCTATACATTAGGGATGTAACGGTATCAGAATTTCACGGTACGGTAATACCTCGGTATGAATGTCACGGTACGGTATTTATTGAATCATTTACAGGAAAAACAAAACTTTTGAAAATACTCCAAAAAAGTGCCAAAAGTGTCAATGACATACAAATTAGTCATCTATCTGTAAGCTTTGAAACAGGAACTTCAA
Associated Phenotype:
Not determined