Busch Lab

ZMP

arhgef1

Ensembl ID:
ENSDARG00000040380
ZFIN ID:
ZDB-GENE-030722-5
Description:
rho guanine nucleotide exchange factor (GEF) 1 [Source:RefSeq peptide;Acc:NP_001075100]
Human Orthologue:
ARHGEF2
Human Description:
Rho/Rac guanine nucleotide exchange factor (GEF) 2 [Source:HGNC Symbol;Acc:682]
Mouse Orthologue:
Arhgef2
Mouse Description:
rho/rac guanine nucleotide exchange factor (GEF) 2 Gene [Source:MGI Symbol;Acc:MGI:103264]

Alleles

There are 7 alleles of this gene:

Allele Name Consequence Status Availability
sa23467 Essential Splice Site Available for shipment Available now
sa16009 Nonsense Available for shipment Available now
sa23466 Essential Splice Site Available for shipment Available now

Mutation Details

Allele Name:
sa23467
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000059102 Essential Splice Site 98 935 3 22
ENSDART00000114710 Essential Splice Site 312 1149 8 27
Genomic Location (Zv9):
Chromosome 19 (position 11569518)
Other Location(s):
Assembly Chromosome Position
GRCz10 19 11161270
GRCz11 19 11079268
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACAACCGCTGCAGGGACACACTACCAAACTGTGTGAAAATGAAACAAAAG[G/A]TGGGATATTAGTGCACGCATGGGTCACGTGGAATACATGAACCACTGACA
Long Flanking Sequence:
TAGAATGCTCTAAAGAAGATTACTAATAAGAATTTTAACGCAGACATGGAGAGAGTTCAAGAGGGAGAGACAGATAGGAAAAAAACTGGTATGGTACATTTACTTCATTATTTAAAGTAATATACAATGTACAAATCTCAAAGGGAAAGTAGGAGATCTTCATATGTTTTTTTTTTTTTCATAGGAAATCAATTGTACGCTAAGCTAGTAGTTGTGATTGGCGACGTAGACTGGTTAGTTCAGACTGATAGATCCTCTTAGACCAAAACAAACCACTCATACAAGTCTATTATAGTCAAGAATGGCTTTAGTGGCATTTAATGACCAAATAGAACAAGCTGAGGTGTGTAAATGTGACCGTATGTAGATTATGCTATGTGACGACAATGTAAAATAACAAGATTGGTTCTGGTGTGTTCTTTTGTTTTTCAGCCTGTAACGTCACCATACACAACCGCTGCAGGGACACACTACCAAACTGTGTGAAAATGAAACAAAAG[G/A]TGGGATATTAGTGCACGCATGGGTCACGTGGAATACATGAACCACTGACATGCAGAAACATTTTACTTCATGGAATGATGATGGTATAGATTTAGATGTAATCTAAATATGTCATCTGTGTGTGTCACAACAGCAACAAAAAATGGCACTGATGAGGAACAATTCAGCCTATCAGAACGTAACACTGAGGAATAAAGGTGAGGATGGAGTAGAAATAAGTCAACTGTCTATTTATTTATGTCAATCCAATCAAAAGTGAGCAGTTGCGTGGGACAGATCTTATTGAGAAGACCATGTGACTTGTTCGTTGAGTGAAATAGATTTACTCTAGGTGTAAATTTAGTCCAAGTGTAAAAATGACATTGATCTCTCTTTTTCTACCTTTCTAAAGCCCATTTAAAGGAAAGGCCGAGTTCTGCCATCTACCCTTCAGACAGCCTTCGCCAGTCGCTACTCGGGTCCCGTCGTGGACGCTCTTCTCTTTTACTTTCAAAGAGCGT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa16009
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000059102 Nonsense 557 935 13 22
ENSDART00000114710 Nonsense 771 1149 18 27
Genomic Location (Zv9):
Chromosome 19 (position 11545578)
Other Location(s):
Assembly Chromosome Position
GRCz10 19 11137330
GRCz11 19 11055328
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GAGCGAGGSTTGTTTCTGATCAGCAGTGAGTCCAGCCCACCTGAGATGTA[C/A]GAGCTCTATGCRGCRAGCAAAGATGACAGAAACACCTGGCTTCGCCTYAT
Long Flanking Sequence:
TCACATCTACATGTCTAACTATTCTCTCTTTGAAAGTGTCACCCTGCCTTAGACCCCTTTTGATTTCAAAGCCCTGCAATGGTATCTTAAAAAATTTGAGTTCTGAACAAGTACCAACGGTCTACACTATCGAAATCTTTTTAGGCTCCATAAATTTGGCATATTTTAAGCTCCATAAACCTCTGGATAAGGAAGAGTCGATCAGAATAGCGTAAGAATAGATACCATTCTTCTTACAGTTTACTTTCCGGACATGTCTTCAAATTTGTTTGCCCTTAGCATTGCATCCTAACAATTCCTAAAGGGGTTTGAATTTACTGATTGCATTTGGATGTTATCAGTATGCTAATGCACACAGATGGCAAATTTGTTCTGTTTGTGTCGTGTGTGTAGGACAAGTCTGCTGTAGTGTCACTGCAGAGTCTATTGGTTCGAGATATAGCCAATCAGGAGCGAGGGTTGTTTCTGATCAGCAGTGAGTCCAGCCCACCTGAGATGTA[C/A]GAGCTCTATGCGGCAAGCAAAGATGACAGAAACACCTGGCTTCGCCTTATACAGCAGACCATCGGCAGGTACAAACACATCTTTGTCTTTGCAGTGGAATTTGAAATTGCATTTCTTTTGAATTTGGATAATAAGCGGAAATATTTTGAAGGGATTTGTCAATCTGCTGGAAGCATTACTTGCCAAGTAGCCTGTGTTTGTTTTACAACTCAGCTAAAACTAATCTGACCCTAATACCATAGACATAGTTTAGACATAGTTTAGACAAAGTTTAGTTCCAACCCCAATCAGACACACCTGAGCTAGCTAATCAAGCTCATACTAGGCTTTCTAGAAACATTTATGCTGGTATGTTGAGCCAAGTTGGAGCTAAAATCTGCAGGACACCGGCCTTCCAGGACTGAGTTTGGACACCCCTGGCTCAGACCATGCTGGCAAAAAGTTATAGATCTTTCCAGTTGCTCTGTAGCTTGTTTGCCTTTCTTGTTTATGATGTGACC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa23466
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000059102 Essential Splice Site 580 935 13 22
ENSDART00000114710 Essential Splice Site 794 1149 18 27
Genomic Location (Zv9):
Chromosome 19 (position 11545509)
Other Location(s):
Assembly Chromosome Position
GRCz10 19 11137261
GRCz11 19 11055259
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AAAGATGACAGAAACACCTGGCTTCGCCTTATACAGCAGACCATCGGCAG[G/A]TACAAACACATCTTTGTCTTTGCAGTGGAATTTGAAATTGCATTTCTTTT
Long Flanking Sequence:
AGCCCTGCAATGGTATCTTAAAAAATTTGAGTTCTGAACAAGTACCAACGGTCTACACTATCGAAATCTTTTTAGGCTCCATAAATTTGGCATATTTTAAGCTCCATAAACCTCTGGATAAGGAAGAGTCGATCAGAATAGCGTAAGAATAGATACCATTCTTCTTACAGTTTACTTTCCGGACATGTCTTCAAATTTGTTTGCCCTTAGCATTGCATCCTAACAATTCCTAAAGGGGTTTGAATTTACTGATTGCATTTGGATGTTATCAGTATGCTAATGCACACAGATGGCAAATTTGTTCTGTTTGTGTCGTGTGTGTAGGACAAGTCTGCTGTAGTGTCACTGCAGAGTCTATTGGTTCGAGATATAGCCAATCAGGAGCGAGGGTTGTTTCTGATCAGCAGTGAGTCCAGCCCACCTGAGATGTACGAGCTCTATGCGGCAAGCAAAGATGACAGAAACACCTGGCTTCGCCTTATACAGCAGACCATCGGCAG[G/A]TACAAACACATCTTTGTCTTTGCAGTGGAATTTGAAATTGCATTTCTTTTGAATTTGGATAATAAGCGGAAATATTTTGAAGGGATTTGTCAATCTGCTGGAAGCATTACTTGCCAAGTAGCCTGTGTTTGTTTTACAACTCAGCTAAAACTAATCTGACCCTAATACCATAGACATAGTTTAGACATAGTTTAGACAAAGTTTAGTTCCAACCCCAATCAGACACACCTGAGCTAGCTAATCAAGCTCATACTAGGCTTTCTAGAAACATTTATGCTGGTATGTTGAGCCAAGTTGGAGCTAAAATCTGCAGGACACCGGCCTTCCAGGACTGAGTTTGGACACCCCTGGCTCAGACCATGCTGGCAAAAAGTTATAGATCTTTCCAGTTGCTCTGTAGCTTGTTTGCCTTTCTTGTTTATGATGTGACCTCTGGGCTGCTTGGCCCTGATAATTGCTGCTTGCAGCTATATTTATCAGTATTATTAATACATTACAAT
Associated Phenotype:
Not determined