Busch Lab

ZMP

barx2

Ensembl ID:
ENSDARG00000041098
ZFIN IDs:
ZDB-GENE-081104-285, ZDB-GENE-081120-4, ZDB-GENE-081120-4
Description:
Novel protein similar to vertebrate BARX homeobox 2 (BARX2) [Source:UniProtKB/TrEMBL;Acc:B8JMG1]
Human Orthologue:
BARX2
Human Description:
BARX homeobox 2 [Source:HGNC Symbol;Acc:956]
Mouse Orthologue:
Barx2
Mouse Description:
BarH-like homeobox 2 Gene [Source:MGI Symbol;Acc:MGI:109617]

Alleles

There are 3 alleles of this gene:

Allele Name Consequence Status Availability
sa36732 Nonsense Mutation detected in F1 DNA Not yet available
sa23384 Nonsense Available for shipment Available now
sa11113 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa36732
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000060219 Nonsense 166 268 3 4
ENSDART00000138806 None None 148 None 2
Genomic Location (Zv9):
Chromosome 18 (position 45787097)
Other Location(s):
Assembly Chromosome Position
GRCz10 18 47344785
GRCz11 18 47340177
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTGGATCTGGCTCAGTCACTGGGACTCACACAGCTCCAGGTGAAGACGTG[G/A]TACCAGAACCGACGCATGAAATGGAAGAAAATGGTGAGTCCAACAAGCTC
Long Flanking Sequence:
GGCAACTTTTAAAGCGTTTGTTTCACACAGCAGATGCCCTTCCAGCTGCAACCCAGTATTGGTAAACACCCATACACTCTCACATTCACACACACACTAGTACATTACAGCCAATTTAGCGCATGTCTTTGGACTGTGGGGGAAACCGGATCACCCAGAGGAAACCCACGCCAACACGGGGAGAACATGCAAACTCCACACAGAAATGCCAACTGACCCAGATGAGGCTCGAACTAGCAACCTTCTTGCTGTGAGGCGACATTGGTAACCACTGAGCCACCAAAATAAAGCATTATCACATCATTTTGTTCTTATTGAACAGACTTGACAATGAACATGTTGCCTTAAATGTTCCCTCCATAGGCAGCATGGGACTGGAATAATAATCTTCCATTGGTGTTTGATTGATGTACTTTGATTAACTTCTCTTATTTTGTGTGTGTGTGCAGATTGGATCTGGCTCAGTCACTGGGACTCACACAGCTCCAGGTGAAGACGTG[G/A]TACCAGAACCGACGCATGAAATGGAAGAAAATGGTGAGTCCAACAAGCTCACAGGATCATCGGCCTCCAAAGCCTATAGTCCATTAGAAAACTGTCAATAAAACATCCGCGTTCAAAATCCACCACGAATGGAAACTCTGAGACATATCATTAAAAATCCATTAGACAGTTTTGAGCGGCCCTCCTCGGCACTCAATACAATCAGTGTGTGTAACGGCTACGACCTCGGCCGCCATCTGTGTGTGTGTGTGTGTGTGACATGAGTGATGATTTAAAGGACAGTACAGGTCTACGTCAGTGTGATCAACCTCTCAAGCAGGAACAAAAGATTACCTCGGAGATAAATGAGCATGAACAAACAGCCCACACAGCTATAAGTCTTCCTTAATCACTGTAATAACCATCCTCACCTTTGACTAGGCCCACATTTTTCACAGAGTAGCCAAAAACGGAACGGTAAAAACTATTACTGAAGTGATTAACTGGAGAAATGGCAAAAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa23384
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000060219 Nonsense 202 268 4 4
ENSDART00000138806 None None 148 None 2
Genomic Location (Zv9):
Chromosome 18 (position 45789969)
Other Location(s):
Assembly Chromosome Position
GRCz10 18 47347657
GRCz11 18 47343049
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTCCAACCAAACCTAAAGGCCGACCCAAGAAGAACTCAATCCCAACCACT[G/T]AGGAGATCGAGGCCCAGGAGCGAATGGAGGCCAAACTGGCAGAGGAGGAG
Long Flanking Sequence:
ATTATATAATTATTTTATTATATATAAAATATATTATTATCATCATCATATACTATTAATATTTTATTCTGTATTTATATTTAATTATTATACTTATTTGACTACTTACTGCTTTTATTATTGTATTTTCAGCCGTTATTTATGTTATGATACAGTGATTTCTACTGGTTGTATTCTCTGTTCTTTGTTCTTTTGTTTTGTTCTATTAAAGTTTAAAAAAAAAACTTATGTAAGGTAATAAATGCAATTTGCGCAAAAAAGATTCTAGGACAACTTGCTGCAGAGGTTATTGAGTTGACTCAACTTAAATTGAGTCAAGTCCAGTACTTTGGTTAAAAAGTTAAGTCAACTCAAAGCTGTGCAGCAAGTTGGCCTACAATTTTAAGCTTAATGAACTTTTTTTTAACATAGTGTGTGTGTGTTTTTAGGTGCTAAAAGGAGGGCACGAAGCTCCAACCAAACCTAAAGGCCGACCCAAGAAGAACTCAATCCCAACCACT[G/T]AGGAGATCGAGGCCCAGGAGCGAATGGAGGCCAAACTGGCAGAGGAGGAGAGGCTACATGCAGAAGTGGAGGACGAAGTTTTCCAGTCTCAACCTCAGGATCTCAGTACATCCGCCACATCCGCCGTCGAGTATGTCTGTCCAGAAAGCCCAGAGCGAGAGCAGGCACCGGCATCACCGTCAGAAGCAATGACCACCAGCTAAACGCCAGCAAACGCCAACACTGAAAAGACTTTGGAAAGACTTTTGAACGGCTTCCCGGGCTGATTTTGAGTTGTCAGTGGCTCCAGAAAGTAGAGCGATACTTTAGACACATAAAATGTGCGAATGTCATTGTCAAAACAACAAAACGTCAAACCTAGTGGCTTGTAAAACAAGAAAGGATTGAATAAGCACACTTCTTAAGAAAACATTTCACAGAATAAGCTTTTTTTCAGAAGCATTTTACAATAAGGTCTCATCGGTTAACATGAACTGACACTAAATACTCACACAGCATTT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa11113
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000060219 Nonsense 254 268 4 4
ENSDART00000138806 None None 148 None 2
Genomic Location (Zv9):
Chromosome 18 (position 45790125)
Other Location(s):
Assembly Chromosome Position
GRCz10 18 47347813
GRCz11 18 47343205
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GTACATCCGCCACATCYGCCGTCGAGTATGTCTGTCCAGAAAGCCCAGAG[C/T]GAGAGCAGGCACCGGCATCACCGTCAGAAGCAATGACYACCAGCTAAACG
Long Flanking Sequence:
GATTTCTACTGGTTGTATTCTCTGTTCTTTGTTCTTTTGTTTTGTTCTATTAAAGTTTAAAAAAAAAACTTATGTAAGGTAATAAATGCAATTTGCGCAAAAAAGATTCTAGGACAACTTGCTGCAGAGGTTATTGAGTTGACTCAACTTAAATTGAGTCAAGTCCAGTACTTTGGTTAAAAAGTTAAGTCAACTCAAAGCTGTGCAGCAAGTTGGCCTACAATTTTAAGCTTAATGAACTTTTTTTTAACATAGTGTGTGTGTGTTTTTAGGTGCTAAAAGGAGGGCACGAAGCTCCAACCAAACCTAAAGGCCGACCCAAGAAGAACTCAATCCCAACCACTGAGGAGATCGAGGCCCAGGAGCGAATGGAGGCCAAACTGGCAGAGGAGGAGAGGCTACATGCAGAAGTGGAGGACGAAGTTTTCCAGTCTCAACCTCAGGATCTCAGTACATCCGCCACATCCGCCGTCGAGTATGTCTGTCCAGAAAGCCCAGAG[C/T]GAGAGCAGGCACCGGCATCACCGTCAGAAGCAATGACCACCAGCTAAACGCCAGCAAACGCCAACACTGAAAAGACTTTGGAAAGACTTTTGAACGGCTTCCCGGGCTGATTTTGAGTTGTCAGTGGCTCCAGAAAGTAGAGCGATACTTTAGACACATAAAATGTGCGAATGTCATTGTCAAAACAACAAAACGTCAAACCTAGTGGCTTGTAAAACAAGAAAGGATTGAATAAGCACACTTCTTAAGAAAACATTTCACAGAATAAGCTTTTTTTCAGAAGCATTTTACAATAAGGTCTCATCGGTTAACATGAACTGACACTAAATACTCACACAGCATTTACTAATACGTTGTTAAAATCCAAATTAGAGTCAAGACACTACTGAAGATTTTAATATCATTTTTTAATCGTTTTTTTTATGTATAAATAAATAGACATTAAATATATATTAAAAATGCTCACTTTGTCTGCAATTATGATTTATAGTTATGTCTGA
Associated Phenotype:
Not determined