ZMP

si:dkey-47k20.2

Ensembl ID:

ENSDARG00000056006

ZFIN ID:

ZDB-GENE-060503-735

Description:

Novel protein similar to vertebrate pheromone receptor protein [Source:UniProtKB/TrEMBL;Acc:A3QJY0]

Mouse Orthologues:

AC139131.1, AC161211.1, AC161211.2, Vmn2r54

Mouse Descriptions:

vomeronasal 2, receptor 53 [Source:RefSeq peptide;Acc:NP_001098114]
vomeronasal 2, receptor 54 Gene [Source:MGI Symbol;Acc:MGI:3704110]
vomeronasal 2, receptor 55 [Source:RefSeq peptide;Acc:NP_001098115]
vomeronasal receptor Vmn2r56 [Source:RefSeq peptide;Acc:NP_001098118]

Alleles

There are 3 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa23330	Nonsense	Available for shipment	Available now
sa25069	Nonsense	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa23330

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC
Order Allele From EZRC

Mutation:

T > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000059457	Nonsense	111	864	4	8
ENSDART00000135254	Nonsense	109	864	2	6

Genomic Location (Zv9):

Chromosome 18 (position 31786240)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	18	33583099
GRCz11	18	33557694

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

GACGAAATCAATAGGAATCCAAACCTGCTTCCGAACATCACTCTTGGTTA[T/A]TATCTTTATGACAACTGTGTCAAGTTGAGTGTGGCATTCAGGGCTGCTAT

Long Flanking Sequence:

TCAGATCAGGTCCCTGTCAGCTCCAGGGGCAATTCAGGCTGAACGGGATGTTCCAGGAAGGAGATCTCATCCTTGGAGGGCTATTTGAGGTTCACTTCCTCACAGTGTTCCCAGAGCAGAGCTTCAGAACAGAGCCAGAACCACCATACTGTGAGCAGTGAGTCTGGGGTCAGACTGGACCAAGATTTCTTATAAATACAAAATGAATATATTAAATCAAGACGCTACTTAAGAATTAACAGTTATATGTTTTACTTATCAGAATATGTAAACAATTAATGTTTACCATAAAAAGCAGCTCTTTAAGAATATAAGATTTTTTGTCAGGAATTGTCTTGTATCTGCAAAGATTTTCTGAAATATCAGTTCTGAAATAACATAATTTCTTCTGCTCTTTATAGATTTGATATGGCAAGTTTCCAGCAGGCACAGACTATGGTCTTTGCAATAGACGAAATCAATAGGAATCCAAACCTGCTTCCGAACATCACTCTTGGTTA[T/A]TATCTTTATGACAACTGTGTCAAGTTGAGTGTGGCATTCAGGGCTGCTATGGCTCTTGTTAGTGGCACAGAGGAATCATTCTCCAGCCTAAACTGCACTGGCCCTCCACCAGTGATTGCCATAGTGGGGGACCCTGGATCTACCCACTCAATTGCAATCTCTAGTATATTAGGGCTGTTTAGAGTGCCTATGGTAAGTGTGAATGTGAAATTTGTGGGGGAAAAAATCTAACTGTACAGACTGCATTTAAATTGCCAAATAAATAAGAGTAGAATTTACCACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAAGCAACAACAGAAATCTTATTTACAGCTCATCTGTGTCTCTTCTATAAGGTTAGCTACTTCGCAACCTGCTCCTGTTTAAGTGACAGGAAAACATACCCATCTTTCTTCAGAACAATACCCAGTGATGCTTTCCAGGTGCGGGCTATGGTT

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa25069

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

T > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000059457	Nonsense	547	864	7	8
ENSDART00000135254	Nonsense	545	864	5	6

Genomic Location (Zv9):

Chromosome 18 (position 31789252)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	18	33586111
GRCz11	18	33560706

KASP Assay ID:

554-7393.1 (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

TGCCCCCCAGGCACCAGACAAGTCAGGAGGAAGGGCCTTCCTGTCTGCTG[T/A]TTTGATTGCCTGCCATGCGCAGATGGAGAGATTTCTAACACAACTGGTAT

Long Flanking Sequence:

CTAACTCATTCTGAATTATTCTAAAAACCCTTAAATACTCTTAAATACAAATGGTTTGTAAATAATGCAATACTTAATTTAGTAATGAAAATAAATCATTAGCAAAGCATGAAAGTACAATTATTAAGCACATTATAAATGTTTGTAAGTCAAGAATAGAGCATATGTAGCTGCAGTTATAAACTGCTTACTAATGTAGAGTTAATGCTTAGAGTTAAAACAGATAATGAATTCACCATTTGATTATGCTTAATAAATGATTTATAGTGTGTAGTTATTATAAAGTGTTACCAAACTATCTTGTACTACATTCTTATACTTTGGTTTGTTACTATGAAATTGTATATGGTTTGAACCTATACTTAATGATGGATGAACATACATATTACAAAGATAAGTAATATTATATGCTGTACCCCTTAGCCCCCACAGTCTGTGTGTAGTGAGAGCTGCCCCCCAGGCACCAGACAAGTCAGGAGGAAGGGCCTTCCTGTCTGCTG[T/A]TTTGATTGCCTGCCATGCGCAGATGGAGAGATTTCTAACACAACTGGTATAAATTCTACTACAAAATTGTAATTAAATTGAAAAGGGAACCAAATAATTGTTTGTTTTTTTTCATACAGATGCTATTGAGTGCAAAATATGTCCTGATGAGTTATGGCCCAATCCAAATAAAGATCAGTGTGTCCCAAAAGAAGAAGATTTTTTGTCCTTTGAGGATCCTCTGGGCATCTCTCTGACCACTGCTTCCCTGCTTGGCACCTGCTTCTGTGCTCTTGTTATGGTCATCTTCTCTCATCATCGTAACACTCCTGTAGTTCGTGCCAACAATTCAGAGCTCAGCTTCCTGCTACTTTTGTCACTCAAACTGTGTTTTCTGTGTGTGTTGCTGTTCATTGGACGACCAAAGTTATGGACATGTCAGTTAAGGCATGCTGCATTTGGCATAAGTTTTGTTTTATGTGTCTCCAGTATCCTGGTCAAGACTATGGTGGTAATAGCCG

Associated Phenotype:

Not determined