ZMP

si:dkey-29p10.4

Ensembl ID:

ENSDARG00000017173

ZFIN ID:

ZDB-GENE-050420-117

Description:

Novel protein similar to vertebrate tripartite motif-containing family [Source:UniProtKB/TrEMBL;Acc:

Human Orthologues:

TRIM16, TRIM16L, TRIM25, TRIM29, TRIM47, TRIM8

Human Descriptions:

tripartite motif-containing 16 [Source:HGNC Symbol;Acc:17241]
tripartite motif-containing 16-like [Source:HGNC Symbol;Acc:32670]
tripartite motif-containing 25 [Source:HGNC Symbol;Acc:12932]
tripartite motif-containing 29 [Source:HGNC Symbol;Acc:17274]
tripartite motif-containing 47 [Source:HGNC Symbol;Acc:19020]
tripartite motif-containing 8 [Source:HGNC Symbol;Acc:15579]

Mouse Orthologues:

4933422H20Rik, Trim16, Trim25, Trim29, Trim47, Trim8

Mouse Descriptions:

RIKEN cDNA 4933422H20 gene Gene [Source:MGI Symbol;Acc:MGI:3588186]
tripartite motif-containing 16 Gene [Source:MGI Symbol;Acc:MGI:2137356]
tripartite motif-containing 25 Gene [Source:MGI Symbol;Acc:MGI:102749]
tripartite motif-containing 29 Gene [Source:MGI Symbol;Acc:MGI:1919419]
tripartite motif-containing 47 Gene [Source:MGI Symbol;Acc:MGI:1917374]
tripartite motif-containing 8 Gene [Source:MGI Symbol;Acc:MGI:1933302]

Alleles

There is 1 allele of this gene:

Allele Name	Consequence	Status	Availability
sa23318	Nonsense	Available for shipment	Available now

Mutation Details

Allele Name:

sa23318

Status:

Available for shipment
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Availability:

Order Allele From ZIRC

Mutation:

T > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000098324	Nonsense	530	560	11	12
ENSDART00000136172	Nonsense	682	717	7	7

Genomic Location (Zv9):

Chromosome 18 (position 27303129)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	18	27376384
GRCz11	18	27358762

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

TGAAGGCAGATTGTCGTTTTATAGTGTGGCCAGAGATGGTGCTCTTTCTT[T/A]GCTCTATAGCTTTGAGCACACGTTTAGTGAGCCGCTGTATCCTGCGCTGG

Long Flanking Sequence:

CACAAACATTACATCTGACAGCAGATTTATTTATTTATTTTGTTCATCCACAGATGGGATAAGCCCAACTCTAGATCCTGATACAGTCCATCCAAAGCTGCTGCTGTCCAACGAGAATAGGATGGTACAGTACAGCGAGACCCAGCAGGACTACAGCGAACATGAGGCACGATTCAACATCTTCCCTCAGGTTCTGGGCTCTGATGCCATAGAAAGGGGCTGCTGTTATTGGGAAGTGGAGGTTTCTCTTGATGAGGGTCGCTGGAAGGTGGGCGCCTGTGATGGGCGGATTGGCAGAAAGGGGCAAAAAGACGTCTGCCGTATTGGCTTCTACCCTAATTCTTGGTGTTTAATTTATGAGAAGGGGAAGGTGGAAGCTCTACATGATAAAGTGGCTTCACCTGTTTGTGCGACTGATCTCCAGAAAGTCGGGGTGTTGCTGAATTTAAATGAAGGCAGATTGTCGTTTTATAGTGTGGCCAGAGATGGTGCTCTTTCTT[T/A]GCTCTATAGCTTTGAGCACACGTTTAGTGAGCCGCTGTATCCTGCGCTGGCTGTTTCTAAAACTCAAGTTAGTATCTGCGACGTGTTTAGCAAGAGTGTGGCAGAATAGTAGATTTTTTTGGTAGCATTTTATGAAGAGGTTTCAGTTTTTATTGTTAGTGTTCTATAATGGGTTAAAGTCATCATTTACATCATGATGAAAGTTTAGCAACGTGTCATTCAAAACAAAAAGGCTGTGTTCGTTTTGATTATACAAATGAGATTGCGGATGATATATATTGCATTGTGCTTATTTGTAACAACATTTATTCTTAGTGCATTGATCTGTTAGATAAGTGCTAATACTGGAATTAATGATCCGCAGTCATACTAGTCTTCTTGTTTTCACGTTTTATTTGACATTCATCAGGAAACAGACACAATTGTGTTCTTTTTTACTTTACACACTGAGGAAGGCATTGAAATAGTTTGTCTCCTGACAAAGGTCAAATAAAACATCA

Associated Phenotype:

Not determined