Busch Lab

ZMP

si:dkey-24l11.1

Ensembl ID:
ENSDARG00000060879
ZFIN ID:
ZDB-GENE-050419-117
Description:
hypothetical protein LOC571287 [Source:RefSeq peptide;Acc:NP_001074966]
Human Orthologues:
SLC28A1, SLC28A2
Human Descriptions:
solute carrier family 28 (sodium-coupled nucleoside transporter), member 1 [Source:HGNC Symbol;Acc:1
solute carrier family 28 (sodium-coupled nucleoside transporter), member 2 [Source:HGNC Symbol;Acc:1
Mouse Orthologues:
Gm14085, Slc28a1, Slc28a2
Mouse Descriptions:
predicted gene 14085 Gene [Source:MGI Symbol;Acc:MGI:3702173]
solute carrier family 28 (sodium-coupled nucleoside transporter), member 1 Gene [Source:MGI Symbol;A
solute carrier family 28 (sodium-coupled nucleoside transporter), member 2 Gene [Source:MGI Symbol;A

Alleles

There are 5 alleles of this gene:

Allele Name Consequence Status Availability
sa23315 Nonsense Available for shipment Available now
sa17349 Nonsense Available for shipment Available now
sa36664 Essential Splice Site Available for shipment Available now
sa23316 Nonsense Available for shipment Available now
sa36665 Essential Splice Site Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa23315
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
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Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000086215 Nonsense 5 654 2 18
ENSDART00000098356 Nonsense 5 589 2 17
ENSDART00000132728 None None 632 None 17
Genomic Location (Zv9):
Chromosome 18 (position 26773697)
Other Location(s):
Assembly Chromosome Position
GRCz10 18 26846952
GRCz11 18 26829330
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCATTTAAGCTGGTAAAGCCCTTTTGGTTACTTTTCTTGCAGAGGACAAA[G/T]AAGATTTGCAGTTGACGGACGTCTCGTATGGGAACGAACAAGGCGTGGAT
Long Flanking Sequence:
CCCTTCTTCACGTTACATTTTTCAGTTCCTGATAGTTTGTTTTCTTCCACACTTAGTATCTTGTAGCCGCTGGAAATAAGGAGGAGCTTCATTGTAATAAATGATAACAAGATGCTGTTTCATTGACATCACTGACCAGCAATCTGATAGCAGCATGCATGTGTCTTAAACAAAAACACATTAGTATGTAGTTAGTTAATGATAAGATTTCCAAGTGGGCAGAGTATATATCCCAGCTCAAGGTTCAGAACCCAGCACTTGTCACAGAGAACGCAGAATGAGTAAGCCATTTATTTACCTCTCTATTCTTTACACATTTTTTCAAACAAGTATTTTAAACCACTGCATAAAGGAGGTGTCGGTTTCGTATTTGTTGGTAGTAGTTAATGATTATTTTGGATGAGATTTGAAAACGGTCTTGTTTAGAAACTTTAATAGTTGGATCAAGGTTCATTTAAGCTGGTAAAGCCCTTTTGGTTACTTTTCTTGCAGAGGACAAA[G/T]AAGATTTGCAGTTGACGGACGTCTCGTATGGGAACGAACAAGGCGTGGATAATCCAGTCTTTGTGAAGGTATGTTTGAGAAGAAGTGAGGGAGTTTTAGAAGATTTAAAGGTATAGTTCACGCAGAAATGAAGATCTACTCGGCATATTTGTTTTAAACAAAAAAAGAAGATATTTTGAGAAATGTTGGAAACTAGTAGCTAATGAGAATCAGTATACACTGTTAAAATTACATTAATAGTTTCCATTTATTTATGGTGGAATTGCATTATGAGACCTTGATCTCTGCTCTGTCGACTTCTGATATTGAAAATTCAAGTGGCTTTTATTGACATTTTAGTAGTTTGAAATAATAATGTATAAGAAATAATATGTAGAGAAATAAGTCTGTAAATTAACAGAAAAAATACTGGCAGTTTTGGTACTGTATATACAACACTAACCCAGACAATGTATCACTTCAAACTATTAACAATGTTAATAAAAGTCACTTTAACTCTC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa17349
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000086215 Nonsense 126 654 5 18
ENSDART00000098356 Nonsense 126 589 5 17
ENSDART00000132728 Nonsense 112 632 4 17
Genomic Location (Zv9):
Chromosome 18 (position 26775379)
Other Location(s):
Assembly Chromosome Position
GRCz10 18 26848634
GRCz11 18 26831012
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CTCACTTGTCTGGGRGTTTTCATCCTCGTGTGCGAACTAGTGTTTCGGTA[C/A]AAGGKTGACAGCATCAAGAGGTGCYTCAAGCCTGTGCAGMGATGTTTTAG
Long Flanking Sequence:
AGCAATTTAATGATCTGATAATTTTACTTATCAAAATTACATTTCTAGCCATTGTTAAGAAAATGTAAAATTACCATCCGACTGACAAGTAACCCTGTTTCTTATGTTTTCCAACACCAACTTTTATTCGCATTTAGTCCTACTTTACAATTCACATATACAAAGTTATTCTCCATTGTTTGTTACAGCAAAGCATGTCTACCCATCACAGTCACAGAGACCTTCTTCAAGACTCACTCCAAAATAATCAAATATATTGTGTTGGCAATCCTTGCTGCAGGTTATATATCTTCATCCTCCCAGTTTAATATCTATAATTGCATTAATGCATTGGTGATCCTTCTCTCAAAGTGATCATGTATTTTGTGTTTATTTCCTATTGTAGGTTATCTGGCGTACTTCATTTATGCCTGTTATTTAAGCTTCCAGAGGGCTCTTGCATTGGTGGTCCTCACTTGTCTGGGAGTTTTCATCCTCGTGTGCGAACTAGTGTTTCGGTA[C/A]AAGGGTGACAGCATCAAGAGGTGCTTCAAGCCTGTGCAGAGATGTTTTAGATCCAATATGAAATGGATGAAATGGTGAGTAGGACTTTAATACACTATACCCTTAAATCTTTAATGTTTTTTGAAAGAAGTCTTTTTTGTTAGCATTATTTTAAGTAGTATTTAAATATTGTAAAACAATATTAAATAAATAAAACCTATTTTGTATGTTAAGGTATTTTAAAATGAAATAGATTTCTGTCACGGTACTCCAGTCTTTATCGTCACATGATCTTTCAGAAATCTAGTAGTAATTCTAATAAGCTAAATCCTTATCCTTATTAATATTGTTATTAATCTTTTTGCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa36664
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
G > T
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000086215 Essential Splice Site 151 654 5 18
ENSDART00000098356 Essential Splice Site 151 589 5 17
ENSDART00000132728 Essential Splice Site 137 632 4 17
Genomic Location (Zv9):
Chromosome 18 (position 26775454)
Other Location(s):
Assembly Chromosome Position
GRCz10 18 26848709
GRCz11 18 26831087
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTCAAGCCTGTGCAGAGATGTTTTAGATCCAATATGAAATGGATGAAATG[G/T]TGAGTAGGACTTTAATACACTATACCCTTAAATCTTTAATGTTTTTTGAA
Long Flanking Sequence:
ATCCGACTGACAAGTAACCCTGTTTCTTATGTTTTCCAACACCAACTTTTATTCGCATTTAGTCCTACTTTACAATTCACATATACAAAGTTATTCTCCATTGTTTGTTACAGCAAAGCATGTCTACCCATCACAGTCACAGAGACCTTCTTCAAGACTCACTCCAAAATAATCAAATATATTGTGTTGGCAATCCTTGCTGCAGGTTATATATCTTCATCCTCCCAGTTTAATATCTATAATTGCATTAATGCATTGGTGATCCTTCTCTCAAAGTGATCATGTATTTTGTGTTTATTTCCTATTGTAGGTTATCTGGCGTACTTCATTTATGCCTGTTATTTAAGCTTCCAGAGGGCTCTTGCATTGGTGGTCCTCACTTGTCTGGGAGTTTTCATCCTCGTGTGCGAACTAGTGTTTCGGTACAAGGGTGACAGCATCAAGAGGTGCTTCAAGCCTGTGCAGAGATGTTTTAGATCCAATATGAAATGGATGAAATG[G/T]TGAGTAGGACTTTAATACACTATACCCTTAAATCTTTAATGTTTTTTGAAAGAAGTCTTTTTTGTTAGCATTATTTTAAGTAGTATTTAAATATTGTAAAACAATATTAAATAAATAAAACCTATTTTGTATGTTAAGGTATTTTAAAATGAAATAGATTTCTGTCACGGTACTCCAGTCTTTATCGTCACATGATCTTTCAGAAATCTAGTAGTAATTCTAATAAGCTAAATCCTTATCCTTATTAATATTGTTATTAATCTTTTTGCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCCATCCATCCATCCATCCATCCATCCATC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa23316
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000086215 Nonsense 397 654 12 18
ENSDART00000098356 Nonsense 397 589 12 17
ENSDART00000132728 Nonsense 383 632 11 17
Genomic Location (Zv9):
Chromosome 18 (position 26788715)
Other Location(s):
Assembly Chromosome Position
GRCz10 18 26861970
GRCz11 18 26844348
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGTCCTACCCTGAAACGGAAAAGAGCAAGTTCACATCTAAAAGTCAAATT[A/T]AAGTGGACAGTGGGTGGGTTTACCTCTCACATATGAGTTAAGGTGTCTTT
Long Flanking Sequence:
ATCCTGTAATTTGCTAAACAATTTAGCACAGTAGTTTTGAACAGGACTGAGGTTGATTAACAGATTTATGCAAATAATTTGAAAAAAATCTTCATCTGATGCATTTTTACAGCAGTTTAATTCAGTGGATGTTATGATCCCTGACATAACAAAAGTGTAGTAAAATTGAACAGTGCACAAGGGTTAACAGAATGCTTATTGTTTTTAGCATGATTCCAGTGATGCTAGTTCAGTAGCCATTAATTGTTACCTTTAACTTTACCAAGGCAATAAAATCAACTATGTAAAAAAAAAAAAAAACATTTACCCATTTAACTTAAAAATGATCAGGTTTGGTTATTACTACAGTATGTTTTGGGATAATGAATGTCTTTTGTATACAGATTGATGCCTCGTCTTTGATTTCTGCTTCAGTGATGGCTGCTCCATGTGCTTTAGCCATCTCCAAACTGTCCTACCCTGAAACGGAAAAGAGCAAGTTCACATCTAAAAGTCAAATT[A/T]AAGTGGACAGTGGGTGGGTTTACCTCTCACATATGAGTTAAGGTGTCTTTCTCATGTGTGTCATGTAGAAATATCTTTATGTAATGCCATGTTGTTTGTTCTCAGAGGTGAGCAGAACGTGTTGGAAGCTGTTAGCGGCGGTGCGTCTGCTTCTATAGGGCTTGTGGCCAACATTGCTGCTAACCTGATTGCTTTTCTTGCCATCTTGGGCTTCATTAATGCAACTCTAAGATGGTTGGGGGGCATGGTGGGATACCCAGATGTCACCTTTGAGGTGTGTAGCATAATCTTTTTTCATTTGAAGAGAAAATTATTAGTCCTCCTGCATGTGAAATTTTAGTTCTGTTTCAAATATTTCCAAAGTGATGATGAACAGAGCAATGACATTTTCACAGTGAGTAGGTTAACATGGACAACAATACTCAGATTTTTGTACAAATCACTGTTTACATACCATGTAAACAGTGATTTTTTATTAATTTAATCCAATTAAAGTCATA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa36665
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000086215 Essential Splice Site 522 654 14 18
ENSDART00000098356 None None 589 None 17
ENSDART00000132728 Essential Splice Site 508 632 13 17
Genomic Location (Zv9):
Chromosome 18 (position 26791359)
Other Location(s):
Assembly Chromosome Position
GRCz10 18 26864614
GRCz11 18 26846992
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CAGGCTTAATGGCATTTTAGATGACAACGGAGATCCAAATTGGATCTCAG[T/A]AAGTATTTGTGTGGGCTCATCAAAATATGCATAAATTTGCCATTAACATA
Long Flanking Sequence:
AGTATAAAAATCACAGGGAGTTGTAACAGATATTTTAATCCCAGTTTCCTTGCAAAAAAAGGCAATAAAGGTGCCCTTTAATATATTATATAGTAAGATATTTATTTTGAAGAAGGTTATATTTATTTAACAAAAATCATTAGTGGAAAAAACAGCACAATTGTAAAATGCTATTAGAAATGACAATAACTGTTTTTAAATTTTATTTTATTTTAACATGTAGTTCAGACTTGTGATTCACAGCTATATTTTTGGCTTTATATTTAAAAGTGTTCTAAAAGCATGTTCATCTTCAATCCCTTAGCTGATCTGCTCTTTTGTCTTCATGCCGGTGGCCTTCATGATGGGAATTCCATACGATGAGTCTTTCAAAGTGGCTGAACTCATCGGCACTAAACTCTTCCTCAATGAGTTTATAGCCTACGAGAAGCTGTCAGAGCTCAAAAACAACAGGCTTAATGGCATTTTAGATGACAACGGAGATCCAAATTGGATCTCAG[T/A]AAGTATTTGTGTGGGCTCATCAAAATATGCATAAATTTGCCATTAACATACATAATTAGTGGTTTGTGGGGTGCATTAAATGGATACTTCACCTCAAAAACAATACTTGCTCACCCACAAAGAGCTCCAAACTTTTATGAGATTATTTTTTCTTTTGAATACAAAAAGAGGATATTTTGAAGAATGTTGCAAACCTGAAACAACAACTACATCCGTAGTTGGAAAAAATAAATCTCTTTAAATGTGTTTTGTCCAAACTTTTTGCAGGTTCGGTCAGAAATCATCTGCACTTATGCCCTGTGTGGCTTTGCTAATTTCAGCTCTCTTGGAATTGTGATTGGAGGCCTGTGTGAGTATCTGTTCAAATTTTTATAGTCCTGACAATGCATCTTATGACATTTTTTTGGGCATTTTTTTCAGTAGATATTTATATAACATCACTGACTGATACTTTTTAAAAATGGTTTTGTTTCACAGCCTCTATTTGTCCACCAAAGAAG
Associated Phenotype:
Not determined