ZMP
si:ch211-216l23.2
Ensembl ID:
ZFIN ID:
Description:
hypothetical protein LOC565061 [Source:RefSeq peptide;Acc:NP_001038534]
Human Orthologue:
NCOA5
Human Description:
nuclear receptor coactivator 5 [Source:HGNC Symbol;Acc:15909]
Mouse Orthologue:
Ncoa5
Mouse Description:
nuclear receptor coactivator 5 Gene [Source:MGI Symbol;Acc:MGI:2385165]
Alleles
There are 3 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa44888 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
| sa23278 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa44888
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000100341 | Essential Splice Site | 186 | 474 | 5 | 9 |
| ENSDART00000135236 | Essential Splice Site | 186 | 474 | 6 | 10 |
| ENSDART00000137239 | None | None | 118 | None | 4 |
Genomic Location (Zv9):
Chromosome 18 (position 17421968)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 18 | 17773734 |
| GRCz11 | 18 | 17762800 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GTAACACTTTCCTCGTGCACAGTAATCATATTTTCAGAGTCCCTCAAAAG[T/C]AAGTCCCAACTCCCACAAGCTGTTTTCCATTTAAACCACTTTAAATGTTC
Long Flanking Sequence:
CTAATAATTTAGGAGGGCTGATAATTCTGACTTCAACTTTATATGTAATGTGTAAAATGATGATGTTTTTCAAAGTCCTCGGGCAAAAGCATTTATTCGGGTAAAAACAGGACAATTTTGTCATTTTAATATTTTTTACACACTTTTAATATGCTGAACAGATTTGTGTTGGTTTATTTATCCGTGTGGCACATTAAATCCTAACACATTCATTGCTGCATATATCAACCAGGCCACACCCAACAGCCTCAGCTGAAGCGCGGTGCGCAATAACCACATCTCTTCTTCTTCTTTCAAAGGGAATACCCCAAATCATTAGGCCAGTGTTTGCAGGAACTTGGCCTCACTGTGGAAATGCTTTACCTGCAGTCGGAATCAGGCCTGACGCGGGCCCTCCAAGATGTCCGCTCCGACGGTTCCCCCTTTTGTATTCTCGTCGAGCAGACTAATGTAACACTTTCCTCGTGCACAGTAATCATATTTTCAGAGTCCCTCAAAAG[T/C]AAGTCCCAACTCCCACAAGCTGTTTTCCATTTAAACCACTTTAAATGTTCTACAGTTACTACAATTAAATATACAGAACAAGAGAACTACAGTAAAATACATTTGATCTGGTGGTGGGCATTTTTAGTAAATCTTAACTGACATCATTTATGTTTGTGATTGCACAAAAAATACATAAATAACCAATTCTGGAAATACACTGCCAAAACAATTCAACAATGTCAAAAACTGCAAAACAAAAAGTCTACCAACTGCAAAAACAAACAAAAAAGGTCAAAGAATGGCAAAAGCATCAGTGTTTTGTCCAATAATGCAGACATTGCAAAATATTGTAATTCTAAGAATGTTAAAAGCTTCGTTGGACATGACACCAAAATATAAAACATGACCTGTATTTTTGGGTAGAAACATGCTTACAGATTTTTTTTTCTGAAAATATTTAATATTCTAATGCCGAGTTCAGACTGCATGATTTTCTGCATGATGACAGATTTTTAGAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa23278
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000100341 | Nonsense | 188 | 474 | 6 | 9 |
| ENSDART00000135236 | Nonsense | 188 | 474 | 7 | 10 |
| ENSDART00000137239 | None | None | 119 | None | 4 |
Genomic Location (Zv9):
Chromosome 18 (position 17427561)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 18 | 17779327 |
| GRCz11 | 18 | 17768393 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AACCCTCTCCCTCCGCTGGCTGACCCTTCCTCTGCCTCTCTACAGTTCAT[C/T]GAAATATGCCTAAAGAACATGCTATGGAGTTTGTGTTGACGGAGTATGGG
Long Flanking Sequence:
CAAATACACATATTTACATTTAAAATAGTTTTCGATGCAGTCCTAGTTTCGATTTTCCACATTTAATGACTAATTCAGACTATTGATATGACAACATAGACAAAGAGCATATGTGCTAGTCACCCATTGGCTGTAGTGTATGCAGTGTGTTTCAATGCATCTTAGCCATGTAATGTAAGACGACAACACTGTCAAATTTGTCGTCTATTTTGTTGTCACAGTGAGTCTAAAAATGCTCACACTTAAAAAGCAATCTTTTAACTTTTACTCCAAGTGTCCCTATACCCAACTGGCAGGCGGGCTCATGAATGCATCTTTGAGTGCCTTCTGAATGTTGATGTAGTAATGGGGTTAAGCAGCGGTTGGCCGACTGCAGTATGTGTTGCTGATGAGGTGAAACTCTTCTACACACTGCTTAGACTGCAGCGCCTCACACTGAGCACCATATGTAACCCTCTCCCTCCGCTGGCTGACCCTTCCTCTGCCTCTCTACAGTTCAT[C/T]GAAATATGCCTAAAGAACATGCTATGGAGTTTGTGTTGACGGAGTATGGGCGCCAGAGCAGCCCGCAGCGGGCGTTGAACCCCACGGAGGCTGCGACGCGGGCGGCTGAGCTGACGGAGGACTACCTGGAGCGCGGCAAGCTGGAGCGCCACACCGTTCCCTTCACCACCCGCCACCTGCTCTTCCTCCTGGCCGAAGGGTTGCACCTGTACCCGGAGGAGGTTAGCACACTGGCTGTGTTTCTCCAGAACCGCCAGGACCATCTGCAAGGTGAGTGTGCTGGCCTAGTTACGCTCCTATCATAGGGGTTCATCATTTTTTTGTGTTTCTTTGTGCATGATGTCATTTAATGAGCTCCAGTTAGTTTGCTAGGTGTGTGTGTGTGTGTGTGTGTTTGAGGAATAAATCTATGCATATTATACGTTGAATATGTACAAGAATTTGAAGCTGACACAGGGGAGCGGACATTTGTTGACCAAGCAATGACCAGGCCCACATGG
Associated Phenotype:
Not determined