ZMP
zc3h18
Ensembl ID:
ZFIN ID:
Description:
Zinc finger CCCH domain-containing protein 18 [Source:UniProtKB/Swiss-Prot;Acc:Q1LUE5]
Human Orthologue:
ZC3H18
Human Description:
zinc finger CCCH-type containing 18 [Source:HGNC Symbol;Acc:25091]
Mouse Orthologue:
Zc3h18
Mouse Description:
zinc finger CCCH-type containing 18 Gene [Source:MGI Symbol;Acc:MGI:1923264]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa36616 | Nonsense | Available for shipment | Available now |
| sa23270 | Essential Splice Site | Available for shipment | Available now |
Mutation Details
Allele Name:
sa36616
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000090446 | Nonsense | 447 | 1148 | 5 | 17 |
| ENSDART00000124010 | None | None | 284 | None | 2 |
| ENSDART00000135597 | None | None | 218 | None | 5 |
| ENSDART00000141873 | Nonsense | 447 | 1148 | 6 | 18 |
Genomic Location (Zv9):
Chromosome 18 (position 16794381)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 18 | 17146147 |
| GRCz11 | 18 | 17135213 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTACAAAAACAAATGCTTTCGTTCAGGTGTTAAAAAAAGCCACCATACGT[A/T]AAGAGCAGGAGCCAGATTTTGAGGAAAAACGTTTCACCGTGACCATCGGC
Long Flanking Sequence:
TTGGTTTAGGGCAGCTGAGATCGGTCGAGTAAATTTAGTTTGCTTATACATTTAAGACCTTTAAGATTCTATTTGATCAATTGGTTTTACCAATGTCGTATCGGACATACAAGAATAACTCCTGGTTTCTTGTTTAAAGGTAAAGACCCTACTTAGTGTTTGGTCTGCACAGTTCCTCCTACTGTAAAACACATTCTACAGGACTGTCCTGAGTGCAGAAGAGTTTTTTATAAAATAAACTGTCATAAGGACATTCTTTCAATTTTTATCATGTATTAACACTAAAAATATTATCTAATTTCTGTATTCATTTGTTTGTTGTTTTTGATTGTATATTTATTAATGAAATGTTCTTACCATGAAAGTAGCCTTTGTTTCTTATGTGACATTAAATAAAAATTCATTGTCATCTGCTTAGACTTGGTAAATAGGAGAGTTCAATGCATCTAACTACAAAAACAAATGCTTTCGTTCAGGTGTTAAAAAAAGCCACCATACGT[A/T]AAGAGCAGGAGCCAGATTTTGAGGAAAAACGTTTCACCGTGACCATCGGCGAAGATGATCGAGATTTCGACAAAGAAAACGACTTCTTCAGGGAACGCGGTGGTTATCGCATTACTAGAGAGATCAGAGATGCTGGGTATGACCTAACAGTGATTTATCACAGTGTCATCTTTTCCGCTTGTTGTCTTAAGTCACAGATCACTGGAAATCCTACTGATTTTCCTTCTAAAGTATTGTTTTTCCTTTTCTTTTTGAATAGTTTTTAGATGTCATGATGTTGTAGCAGCATTTTGCTAATTAAAGATGAATCACATACAGTAGCATTGTTTCATGATTATTCATGTTGATTTTATCTTGGATTCCTATTGTTAAAAATACTCATGAATGAAATGTTTATATATAAATGTTTCTCTTTTTATTGCATTGCAGTGATATGGAGTTTAGAGAGCCAGGTTATGGGTAAGTACCATAAAATCCACCATAACTAAACCACTATAAAT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa23270
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000090446 | Essential Splice Site | 1010 | 1148 | 14 | 17 |
| ENSDART00000124010 | None | None | 284 | None | 2 |
| ENSDART00000135597 | Essential Splice Site | 81 | 218 | 2 | 5 |
| ENSDART00000141873 | Essential Splice Site | 1010 | 1148 | 15 | 18 |
Genomic Location (Zv9):
Chromosome 18 (position 16743831)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 18 | 17095597 |
| GRCz11 | 18 | 17084663 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CAGGAGGATATGGCTCTCATAAGGACATCAAGCTCACCCTGCTCAACAAG[G/A]TAAATGAGAGAAAACACATGAATGTCACGGCCATGGAGCTGCGCAGAAGT
Long Flanking Sequence:
GTTACCCAGAAAATAAATCATCTAAAGCAATCAGTATTATAGACCATTTCAATGTGGCAATGTCACTGGCCCATTTCCCCCTTGTTACCATAACTGTAACAAAAGGCAGTTTAATCATATCTTAATGTTAAAATGGCTGCCATAACATTATTTAACAGTATTTGAATCTTTTTGGATTTTTTGATGCTGTGAAAATTAGAGGTGTAATACAGGAAATTCATTAGGACCATCATTATTGTTTACATCCCTCAAAGGGGTCTATAATAGAATAAATGATCACAATTGTGTTTTGTGGTGTAACTCTTACAGGTAAACCACCAAAGAAAGACGAGCCTTTCAAAGACGAGCGAAAGAGAGTGGACCCATCCGGTCTCCCATCCAAAGCCAGTTCTGACATGCCTAGATCTGGAAACCGAGGTCACCCAATGCATCCACCGCCCATGGGTCCTCCAGGAGGATATGGCTCTCATAAGGACATCAAGCTCACCCTGCTCAACAAG[G/A]TAAATGAGAGAAAACACATGAATGTCACGGCCATGGAGCTGCGCAGAAGTACATGATGGTTCAGTGACCTCTTTATTCCTCTTTGACCAGCAGCAAACCGACAGGAGCAATAGGAAAAGGTACTTTCCTTCTGATAAAGAGAGACCCCCTTCGCCTCTCCGCAAGAGGATGGCGATGTCACCTGATGGAGGTAAGCAACACCACGTGGCAGCTTTAATTTACATTAGAAAACCCCTTCAGAAGTCTGATATCTTATTGTGGTTAATCTCTTGCAACAACAGAAGTACAGAAATGCAATCAGAGCATTACTTTGCAGTATTTGATAAAGAATTATTTTACGAACTCTTTGTAGGTATGGAGCTTATCGAACAAAATAACTAACAATAACAGTCCAAATACTAGTACAACTAAATTTATTTTTGAGTTCTTACCATCCAAATGGGATGCCACTTTTAAAACATGGTGCGATAAGGGTCTTATGATAATTGATCAGTTATTTA
Associated Phenotype:
Not determined