ZMP
fgd4
Ensembl ID:
ZFIN IDs:
Description:
FYVE, RhoGEF and PH domain containing 4 [Source:RefSeq peptide;Acc:NP_001171404]
Human Orthologue:
FGD4
Human Description:
FYVE, RhoGEF and PH domain containing 4 [Source:HGNC Symbol;Acc:19125]
Mouse Orthologue:
Fgd4
Mouse Description:
FYVE, RhoGEF and PH domain containing 4 Gene [Source:MGI Symbol;Acc:MGI:2183747]
Alleles
There are 5 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa43057 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa36587 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
sa23242 | Nonsense | Available for shipment | Available now |
sa23243 | Essential Splice Site | Available for shipment | Available now |
Mutation Details
Allele Name:
sa43057
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000018144 | Nonsense | 181 | 728 | 6 | 18 |
ENSDART00000125382 | Nonsense | 181 | 728 | 3 | 15 |
Genomic Location (Zv9):
Chromosome 18 (position 11662776)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 18 | 12245606 |
GRCz11 | 18 | 12214324 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AAACCAACGAGCAGAAACTCTACAAAATTGCAAATGAACTTCTGCAGACA[G/T]AGAAGGCCTACGTTGCACGACTGAACTTATTAGATAAGGTAAGTCATCAT
Long Flanking Sequence:
TGAGTTCAGATGCAAAAACCTCTAAGTGCCATCTGAAATGTTGTTCTAAAATGAGCATTTTACTCAACCTCTTGTTTTTATGTTCAGGTATTTCATGTTAAAGGCCATAAAAATAACATACAAGTGAAATTACTGAACATGCAAATAGTAGCCTAGGAAAAAATGCTAATTTTAGAAGAAAATCTCAGATGGCACTTAAAGGTTTTTTGCATCTGATCTCTTCATATATACTTTTCTTTCAGGATTAATCAGAACATTTTTATTATTTTTGCTAATTTAATTAAATTTTTTATATTAATGAATATTAATGATGCTGTTAATTCAATTAAAATATCAATTTTAAAAGATCAATAAAAAAAATCAAACTCAAAATAAACAAAGTGGATTAAACTTTTTCCTGTGCATCTGATACAACATTGAAGAGTTAAAGTTTGACATTTTTTCTTTAGGAAACCAACGAGCAGAAACTCTACAAAATTGCAAATGAACTTCTGCAGACA[G/T]AGAAGGCCTACGTTGCACGACTGAACTTATTAGATAAGGTAAGTCATCATTTTGTTTAGTTTTTGTTGTTGTTGGAGAATTTAATACTAAACCAGTACTAGAACACTGTTTATCAGTAAAGGCTCATGCACATCGGGATGAATTTTGCTCATGCTTGCCATCAGCAGTTTTCGAGACATTTTTAGCATTCCCACCCAAGCGATTTTCTCTGCCGTTGAGCAGAGTGAACATGCAAAATCCCTTATGTTCAGGCACGGATTAAGAATTCAAAGGCCCCTGGGCACAATGTCCTGTAGGCCCCCTACCTGGCCGCATCCATAGTTAAAATTAAAAATAAGACTAATATAATATATATTTTTTAAACATAATCTATAATGTATTGCCCACATTTTTAAAATAAAACACCCAAACACTTCCATTCACACACATACACTTCGGACAATTTAGCCTACACAATTCACCTGTACCGCATGTCTTTGGACTGTGGGGGAAACCGGAGC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa36587
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000018144 | Essential Splice Site | 242 | 728 | 8 | 18 |
ENSDART00000125382 | Essential Splice Site | 242 | 728 | 5 | 15 |
Genomic Location (Zv9):
Chromosome 18 (position 11664981)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 18 | 12247811 |
GRCz11 | 18 | 12216529 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTGAGTGTTTGGTTTAATTAATGGTCTTAATGCTCTGAAATTTACCTCCA[G/T]GACGTCGACACCTCGCATTGGAGACATCCTACAGAAGCTCACGCCCTTCT
Long Flanking Sequence:
AAATGCCTCTTTTAACAAGCGTCTGAATGTTGTTCATAAGTATATTGCTGTTTATGAGTATATTTCAAGTTTCTTATGTAATCCGAAATTAAATCATTACAAAGAACTAAACAACAAGTATACAAATGTGAAAAATGTACAATGCTGACTGCAGTTCACTTAGTAGCCACTGGTGTCACTATTGACACTGTTTTCTTAACTCCATACTTGGACTCTTTAAAAATAGTAGCATGCAGACACATCATGCATCATCTGATTTCGGCCCTCTTTTGCAGGTGTTTTACACCAAGCTCATGGAAGAGGCAAGAAAAGACACGTTCCCTGTGGATGTGGTGAAAAGCATATTTTCCAACATCACCTCCATTAATGCCTTCCACAGCCAGTTCCTTCTGCCTGACCTGGAAAAACGGATGGGAGAATGGTGAGATTTTCACACACTCGAGTTGTAGATTGAGTGTTTGGTTTAATTAATGGTCTTAATGCTCTGAAATTTACCTCCA[G/T]GACGTCGACACCTCGCATTGGAGACATCCTACAGAAGCTCACGCCCTTCTTGAAGATGTATGCAGAGTATGTGAGGAACTTTGATCATGCCATGGATCTGCTGAAGCAGTGGATAGATCGCTCGCCTCCATTTAAAGCTATCATTCTGGATATACAGGTGAACACTGATGCAGATTGCTATTCTTGAAAAGAGTTCTTTTAAATAGCAAAGTTAGGTGGCCATTAGAATGCCAGAAGAAAAATAAATCTAATAAAGTTATATTAAATACAGTGTTGGTGGTAATTAAATGTTGAAATGTAGGCATTTTGTTTTACAAATTATTAGGGCTCCCAACTGCCAAAATAATTGTTCTTTAAAAACATCAATATTTATGATATTTATAATATCAGCCATTAATTCTTTCTTTCTTTTATGCATTCATGATTACTCATAATACATTTTAGTTATTCAAACAAGACTAAAATGCATAATAATATTTGTTGTGAGGTGACAAAAAGGT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa23242
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000018144 | Nonsense | 262 | 728 | 8 | 18 |
ENSDART00000125382 | Nonsense | 262 | 728 | 5 | 15 |
Genomic Location (Zv9):
Chromosome 18 (position 11665042)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 18 | 12247872 |
GRCz11 | 18 | 12216590 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CCTCGCATTGGAGACATCCTACAGAAGCTCACGCCCTTCTTGAAGATGTA[T/A]GCAGAGTATGTGAGGAACTTTGATCATGCCATGGATCTGCTGAAGCAGTG
Long Flanking Sequence:
ATTTCAAGTTTCTTATGTAATCCGAAATTAAATCATTACAAAGAACTAAACAACAAGTATACAAATGTGAAAAATGTACAATGCTGACTGCAGTTCACTTAGTAGCCACTGGTGTCACTATTGACACTGTTTTCTTAACTCCATACTTGGACTCTTTAAAAATAGTAGCATGCAGACACATCATGCATCATCTGATTTCGGCCCTCTTTTGCAGGTGTTTTACACCAAGCTCATGGAAGAGGCAAGAAAAGACACGTTCCCTGTGGATGTGGTGAAAAGCATATTTTCCAACATCACCTCCATTAATGCCTTCCACAGCCAGTTCCTTCTGCCTGACCTGGAAAAACGGATGGGAGAATGGTGAGATTTTCACACACTCGAGTTGTAGATTGAGTGTTTGGTTTAATTAATGGTCTTAATGCTCTGAAATTTACCTCCAGGACGTCGACACCTCGCATTGGAGACATCCTACAGAAGCTCACGCCCTTCTTGAAGATGTA[T/A]GCAGAGTATGTGAGGAACTTTGATCATGCCATGGATCTGCTGAAGCAGTGGATAGATCGCTCGCCTCCATTTAAAGCTATCATTCTGGATATACAGGTGAACACTGATGCAGATTGCTATTCTTGAAAAGAGTTCTTTTAAATAGCAAAGTTAGGTGGCCATTAGAATGCCAGAAGAAAAATAAATCTAATAAAGTTATATTAAATACAGTGTTGGTGGTAATTAAATGTTGAAATGTAGGCATTTTGTTTTACAAATTATTAGGGCTCCCAACTGCCAAAATAATTGTTCTTTAAAAACATCAATATTTATGATATTTATAATATCAGCCATTAATTCTTTCTTTCTTTTATGCATTCATGATTACTCATAATACATTTTAGTTATTCAAACAAGACTAAAATGCATAATAATATTTGTTGTGAGGTGACAAAAAGGTTTAATTTATACTATTTTTAAGTTATGTTTGTTATATTATTTTTTTGAAATTAGTTTTTGCC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa23243
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > T
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000018144 | Essential Splice Site | 294 | 728 | 8 | 18 |
ENSDART00000125382 | Essential Splice Site | 294 | 728 | 5 | 15 |
Genomic Location (Zv9):
Chromosome 18 (position 11665139)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 18 | 12247969 |
GRCz11 | 18 | 12216687 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGTGGATAGATCGCTCGCCTCCATTTAAAGCTATCATTCTGGATATACAG[G/T]TGAACACTGATGCAGATTGCTATTCTTGAAAAGAGTTCTTTTAAATAGCA
Long Flanking Sequence:
CTTAGTAGCCACTGGTGTCACTATTGACACTGTTTTCTTAACTCCATACTTGGACTCTTTAAAAATAGTAGCATGCAGACACATCATGCATCATCTGATTTCGGCCCTCTTTTGCAGGTGTTTTACACCAAGCTCATGGAAGAGGCAAGAAAAGACACGTTCCCTGTGGATGTGGTGAAAAGCATATTTTCCAACATCACCTCCATTAATGCCTTCCACAGCCAGTTCCTTCTGCCTGACCTGGAAAAACGGATGGGAGAATGGTGAGATTTTCACACACTCGAGTTGTAGATTGAGTGTTTGGTTTAATTAATGGTCTTAATGCTCTGAAATTTACCTCCAGGACGTCGACACCTCGCATTGGAGACATCCTACAGAAGCTCACGCCCTTCTTGAAGATGTATGCAGAGTATGTGAGGAACTTTGATCATGCCATGGATCTGCTGAAGCAGTGGATAGATCGCTCGCCTCCATTTAAAGCTATCATTCTGGATATACAG[G/T]TGAACACTGATGCAGATTGCTATTCTTGAAAAGAGTTCTTTTAAATAGCAAAGTTAGGTGGCCATTAGAATGCCAGAAGAAAAATAAATCTAATAAAGTTATATTAAATACAGTGTTGGTGGTAATTAAATGTTGAAATGTAGGCATTTTGTTTTACAAATTATTAGGGCTCCCAACTGCCAAAATAATTGTTCTTTAAAAACATCAATATTTATGATATTTATAATATCAGCCATTAATTCTTTCTTTCTTTTATGCATTCATGATTACTCATAATACATTTTAGTTATTCAAACAAGACTAAAATGCATAATAATATTTGTTGTGAGGTGACAAAAAGGTTTAATTTATACTATTTTTAAGTTATGTTTGTTATATTATTTTTTTGAAATTAGTTTTTGCCATTTCACAACATCTCACACACACTTAATTGTTTGGATCGACATGTCAGGGATTTCCCCAGTAATGGGTTGCAGCTGGAAAGGCAACTGCTGCATAAA
Associated Phenotype:
Not determined