Busch Lab

ZMP

tmem30a

Ensembl ID:
ENSDARG00000030236
ZFIN ID:
ZDB-GENE-040704-26
Description:
transmembrane protein 30A [Source:RefSeq peptide;Acc:NP_997941]
Human Orthologue:
TMEM30A
Human Description:
transmembrane protein 30A [Source:HGNC Symbol;Acc:16667]
Mouse Orthologue:
Tmem30a
Mouse Description:
transmembrane protein 30A Gene [Source:MGI Symbol;Acc:MGI:106402]

Alleles

There are 4 alleles of this gene:

Allele Name Consequence Status Availability
sa39179 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa12779 Nonsense Available for shipment Available now
sa23190 Essential Splice Site Available for shipment Available now

Mutation Details

Allele Name:
sa39179
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000122747 Essential Splice Site 124 372 3 7
Genomic Location (Zv9):
Chromosome 17 (position 50519840)
Other Location(s):
Assembly Chromosome Position
GRCz10 17 49905765
GRCz11 17 50005670
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGGCTGGTGACTGGATGTTATTTTAACCTCTAACTTCTTTTTTTTTTGTA[G/A]AGTAATGTTTTCATGTATTACGGACTCTCCAACTTCTATCAAAACCACAG
Long Flanking Sequence:
TATACCTCTCTGTTTGTTTATGATTATAGTAACACAGGATAATACGAAGTCACATTTTCTGAGTTTGAAAGATTTACTTATATTAAAGCACATTTAGAAATCAACATCATTGTCACTGCTACATCAGTTATTTCATTAACAAAAACCTATAAATGCATATGAAGGTATCAATGAAAAGCATAGCAAGCGTGAACTAATTTAGAGATATATTTAACTCTAGCTCCATTATGTTGTATATTTGCTTTGTCTGCTAACCGTTGGATGGTCAAACAAATCACCTAAAGTGCCATTAGCTCTCATGTATTATGCATTAGTATATTTAGAGGACGTTTTATTGATCGCACCTTTTAATATGTTAAAAATAGAATTGTTTTCCGCTCTTGTTATAACAGAGATCAGTTCAGATGATCTATAAACAACACTGAAGTAGCCTCAGTATAAAAGATTTTATGGCTGGTGACTGGATGTTATTTTAACCTCTAACTTCTTTTTTTTTTGTA[G/A]AGTAATGTTTTCATGTATTACGGACTCTCCAACTTCTATCAAAACCACAGACGTTATGTCAAATCCAGAGATGACAGTCAGCTGAATGGAGACAAAAGCTCTTTACTGGTGAGTGTTTCGACATATGCTGACTAAATGTTTGACTTTGACTTTAGTATATTATATTTAATTTTGTTTTGTGTAAACTTATAGTTTAATATTGGTGCATTTTGTGAGATCTGATGGTATGGAAATGCTTGAGGCCCAAAAGAGAAGTGGTAACAACAGCCAGTAAGTTGTTGGGAACAAAACTAAAGAGTATACTGGTAGTGTATACAAAGAAAGAGCATTACAAAAGGCTATCATGATTGTCAATGAAAGCCTTATTATATATATATTATATATATATATTTGGTGACGCGACTGACGTGACATGCTTTTCCGCTCAGAGTTTACTTTTGTTTAATTGTCGTTTGCATATTGCAAATATGTGTAATTAGTGTAAACATGGCCCTAGCAAG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa12779
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > G
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000122747 Nonsense 168 372 4 7
Genomic Location (Zv9):
Chromosome 17 (position 50519245)
Other Location(s):
Assembly Chromosome Position
GRCz10 17 49905170
GRCz11 17 50005075
KASP Assay ID:
2261-1598.1 (used for ordering genotyping assays)
KASP Sequence:
GTGTWTAAATCTTTTGTTYTACAGAATCCGAGTAAAGAGTGTGAACCGTA[T/G]CGAACAAGTGACAGGAAGCCCATYGCTCCTTGCGGCGCCATTGCTAACAG
Long Flanking Sequence:
AAAGCTCTTTACTGGTGAGTGTTTCGACATATGCTGACTAAATGTTTGACTTTGACTTTAGTATATTATATTTAATTTTGTTTTGTGTAAACTTATAGTTTAATATTGGTGCATTTTGTGAGATCTGATGGTATGGAAATGCTTGAGGCCCAAAAGAGAAGTGGTAACAACAGCCAGTAAGTTGTTGGGAACAAAACTAAAGAGTATACTGGTAGTGTATACAAAGAAAGAGCATTACAAAAGGCTATCATGATTGTCAATGAAAGCCTTATTATATATATATTATATATATATATTTGGTGACGCGACTGACGTGACATGCTTTTCCGCTCAGAGTTTACTTTTGTTTAATTGTCGTTTGCATATTGCAAATATGTGTAATTAGTGTAAACATGGCCCTAGCAAGCATACTTACTGAATTGTTGAATCGAGTTTGTACGTTGTCTTCAAGTGTTTAAATCTTTTGTTTTACAGAATCCGAGTAAAGAGTGTGAACCGTA[T/G]CGAACAAGTGACAGGAAGCCCATTGCTCCTTGCGGCGCCATTGCTAACAGTCTCTTCAACGGTAAGACTGAAGGCTCATAATACTAATAACCCAGAGGAGTAGCGGACTGGCCCGCAGGGCACGCTCCGTGGGGGGGCCCCGCGTGATTAGGGGGCCCCACGTTGTCGCGAAAATCCGGCAACCTCAATAATCAAACTCTTGAAAACAACTGTGGTCGGAACCAATGTTCACAGGTCTGTGTTCTCTGAACTCCTCTCAACCGGTGGACTACTTCATTATGATTGCCGCCGAACCGAGTCAAGCTCGGTCATAGCTCATACCATAAAGTTGACTTGATTTCAACTCTCCTCGACACTCACACAGGTGAAGACGCGCCGCGATGTTTTTCACCGCCGTTTCTCATTGAAAATGAATCACTTCTGGCTACTTTGACGCTCTCGCCGTTTTCGGTTTGTGATCGCTCCTCAGTTTGTGAAGGCTTCCCTGTGTTGTCGCCCCC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa23190
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000122747 Essential Splice Site 309 372 6 7
Genomic Location (Zv9):
Chromosome 17 (position 50516446)
Other Location(s):
Assembly Chromosome Position
GRCz10 17 49902371
GRCz11 17 50002276
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATGACCCCAACACTACCGCCGGGAAACTACAGCCTGGAGGTCGCCTACAG[T/C]ATCCTTCACCAAACCCACACAAAGCCTTGTTCACACCAAGAATGAGCTAT
Long Flanking Sequence:
AACCCAGGAGGAAGCAACAACAACCTCTCCGTTGTTTTCCAAGGTACAACTCAGAAGTCTACTCGATCATTCGGATGTGTTTAGCAGGGCCTTTCAGCTCATGTTTCACATTTCTTTTTGATTAGATTTTTTTCAGATTTCAAGTAAAGATGTTTTATTTTTATGATTTATTTAAAATTTTAGTAGGTTTTCTATTTATTTTTTTTATATGAATACTTTCCGGATGCACTGTACATCAACACATCTCTCTTTTTTTACCCTGAGTCTGTAATGTTTGTCCTCACAGACACCAGCAAACCTGTAAACTGGCGTAAGGCTGTCTACGAGCTGGACCCGGCTGATCCCGAGAACAACGGTTTCGTCAACGAGGACTTGATCGTGTGGATGAGAACCGCTGCTCTTCCCACGTTCAGGAAACTGTACCGCATCATTCAGAAGAAGAAGGACACCATGACCCCAACACTACCGCCGGGAAACTACAGCCTGGAGGTCGCCTACAG[T/C]ATCCTTCACCAAACCCACACAAAGCCTTGTTCACACCAAGAATGAGCTATTAATGCCTTGTTTACACTGACTGGTACAGTACGGTACGGTTCGGGTCGGTACGGGTCACCTTTATCAGGCTTGCGTTTCCACTATAAAGGGTACCCTTTTGGTGGGTGTAGTGTAAGACAGAAAGTTTCAGTCGCATCATTCTCGCTCGAGGAAATGTCTACAGTAAAGCTGCACAGGTTCACGTTCACATATCATATTAAAAGCACTTCTCACAAAACAGATGCTTTACACACATAAATACTTGTGTATAAATGTTTATTACTAACTTTTCTATGAACAGGATTTGATTATAACTGCAGATCAATGACAGTGCCAAATAGCCTACTGTAACGTCTGTAATTATATAAAATAAATACATAAATGAACATATATGAACACATACAGCCCCTGACAGTCTCCGATGTTACCAACTACAGAAAAACTACACACATCAGACATTTCGTTCTTAA
Associated Phenotype:
Not determined