ZMP
sly1
Ensembl ID:
ZFIN ID:
Description:
sec1 family domain-containing protein 1 [Source:RefSeq peptide;Acc:NP_878281]
Human Orthologue:
SCFD1
Human Description:
sec1 family domain containing 1 [Source:HGNC Symbol;Acc:20726]
Mouse Orthologue:
Scfd1
Mouse Description:
Sec1 family domain containing 1 Gene [Source:MGI Symbol;Acc:MGI:1924233]
Alleles
There are 4 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa23101 | Essential Splice Site | Available for shipment | Available now |
| sa23100 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa23101
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000104166 | Essential Splice Site | 94 | 632 | 4 | 25 |
| ENSDART00000134735 | Essential Splice Site | 94 | 623 | 4 | 25 |
Genomic Location (Zv9):
Chromosome 17 (position 28852678)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 17 | 28776605 |
| GRCz11 | 17 | 28793568 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CCATTTACTTTATAATGCCCACAGAGGAGAACATCGACAGGATATGTCAA[G/A]TAAATATGCTTGTTTTGGTCAGTCCCATTCAAAGATAATTTGTTTGAATA
Long Flanking Sequence:
TTTATAAAGATTGACACTGTCAAATCTTGCATGTTAACTGTTGTTTAGAATTGCTAATATATGTCGTTGCTGTTTCTCTCCTCAGCTGCTCTCAAACGAATGCTCAACTTTAATGCCCCACCCCTTAAAAACACAACAGCTGAGCCAGTATGGAAGGTAAGAGACAAACCTAGAAGTTTCCCCTTTTTAAATGTGCTTCAGTGATGCTTTTTTGGCTCACACGTTGCTATTCTTGTTAGGTTCTTATTTACGATCGCTTTGGCCAAGACATTATATCTCCGCTTCTGTCTGTGAAAGAGCTACGAGACATGGGCATCACTCTGCACCTGTGAGCACCTCTAAAACATCCAGTCAGCAGTTTCATAATACTAATCGAAATGATCGTTCACAATTGTTTGTTTCTCTCTAGCTTGTTGCACTCAGATCGCGACCCCATTCCAGACGTTCCTGCCATTTACTTTATAATGCCCACAGAGGAGAACATCGACAGGATATGTCAA[G/A]TAAATATGCTTGTTTTGGTCAGTCCCATTCAAAGATAATTTGTTTGAATAATTTCAGAACATTTATATGCTCCATCACAGGACCTCCGAAACCAACTATATGAGTCCTACTATTTGAACTTCATCTCCGCAATTTCCAGAAGCAAATTGGAGGATATAGCAAGTGCTGCGCTTGCGGCTAATGCAGTAAACCAGGTGACCAAAGTAAGTCCGACATGTTTGTTCACAGTGAGTGTCTGTTGTGCTTTTGCTAGAGCTCGAGCTCAGTGAAGTCCTGCAGAAAGCCAAATAACATGCTGCTCATATTTATTTCAGCTTAAATGTTAGACTGTTCTGTTTCTCCTCAGGTATTTGATCAGTATTTGAACTTCATCACACTTGAGGATGATATGTTCATTCTCTGTAATCAAAACAAAGAGCACATCTCCTACCATGGTAAGCTGTTAAACCCACTTGAAATATTAATTATTTTTAAATATAATCCAGAGTTATTAATAGTTG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa23100
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000104166 | Nonsense | 281 | 632 | 11 | 25 |
| ENSDART00000134735 | Nonsense | 281 | 623 | 11 | 25 |
Genomic Location (Zv9):
Chromosome 17 (position 28845973)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 17 | 28769900 |
| GRCz11 | 17 | 28786863 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTCATTTCTATTAACCAACCAATCCCCCATATTAGGACTTCCACCTGAAC[C/T]GAGTGAGTGTGGACGAGTCTCATGGGTCAGAGGCCAGTCCAGCCGGAGCA
Long Flanking Sequence:
ATATAACTTGTAATATTAGTTTTTTAGGGCAACAGTATCTCCACATCAAAAGCTATTGGTCAGGCCACGATTCAGCAAAAATTTGATAAACAAATCGCCTAGTGCAGTGGTTTTACTTTATATCCAAAGAAAAGAAAGATATCCAAAGATGAAAAAAAATTTTTGTTTTTTAATCTAATGAAGACAGCGGAAGTCAGTGATTTATTTGAATTATTTAGCCTGACATGTTTGCTGTTCCAAAAATATTTCACATTTTTATTCAATTAAAATAAACTGTGTTTAATAGGGGGAAAAGTTGTTGTTTTTTACCCTGACATTTAAAAATAGATCATATTTTACAGCAGTAATCACAATGCCGTTATAGAGTGAAACTGTGATATTTTCATCCAAGGTTATCATACCATCAGAATGTGACACCGGCCCATGCCTAGTTCCTGCATTGTGCTTTGGTTCATTTCTATTAACCAACCAATCCCCCATATTAGGACTTCCACCTGAAC[C/T]GAGTGAGTGTGGACGAGTCTCATGGGTCAGAGGCCAGTCCAGCCGGAGCACGACCCAAAAAGAAAAACAAGAAGAGCTATGATCTCACTGCTGCTGACAAGTTTTGGCAAAAACACAAAGGAAGGTAAACATCTAATGCTGATAAATCTAATGTATACAAATTAAAGGGTTAGTTCACCCAAAATTGAAAGTTCTGTCAATAATTACTCAACAGTCATCCCAAACTCTTGAGAAGCTTGTTTGTCTTTGGAATAAGGAGATATTTTAGATTAAATCTGAGAGCTCCCTCATACTGTCCCGACTCATTCAAAGTCCAGAGTGGTGCCAAAAAAAAGGCCATATGACTTCAGTGGTCTGAGTATTATGAAGTTATGAGGATACATTTGTGTGCACATAGGGTAACTGTTAGACATTTTATGTTATATTAATTTTATATAACATAAAATCTTTAACAGTTACCCTATGCACACTATACTGACACAGAGAAGAAACTGTTAAAT
Associated Phenotype:
Not determined