ZMP
coch
Ensembl ID:
ZFIN IDs:
Description:
cochlin [Source:RefSeq peptide;Acc:NP_001003823]
Human Orthologue:
COCH
Human Description:
coagulation factor C homolog, cochlin (Limulus polyphemus) [Source:HGNC Symbol;Acc:2180]
Mouse Orthologue:
Coch
Mouse Description:
coagulation factor C homolog (Limulus polyphemus) Gene [Source:MGI Symbol;Acc:MGI:1278313]
Alleles
There are 6 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa23099 | Nonsense | Available for shipment | Available now |
| sa12192 | Nonsense | Available for shipment | Available now |
| sa36439 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa23098 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa23099
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000000948 | Nonsense | 4 | 553 | 2 | 12 |
| ENSDART00000129448 | Nonsense | 4 | 553 | 1 | 11 |
Genomic Location (Zv9):
Chromosome 17 (position 28808213)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 17 | 28732140 |
| GRCz11 | 17 | 28749103 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TAAAATGCTCTTTTGTCTCTACAGAAATCTTCATTAACCATGTCGTTGTG[G/A]TTTGCTGTCCTTCATGTTTTAGGTAGGTGATTTGTTTAATTGAAGCAACT
Long Flanking Sequence:
TATTTTTTGTGTATAAGCTTTTAAGGCTGAGGAAACGTCATCCTACACAAAATCTGTAAGTTGGATTAAATCTTCATAGGTTGATGATTTTTGGCTGATTAGTGCCTTTTAATAGTGATCATTTTATATATCCAGATAGTTTTTTTTCTCTTCTTCTCTCTTTTCGTGCCTCTGTCTCCTTTTCCCTCACTCTGTGAGTGGATTAACTGAAGTATGCATTTCCAGAGGAGCTGTTTATGATGGATGTGTCTGGGGAGATTACATTTTTCCTGTATCATATCTGATTTCACTTGTGCGAGCCAAATACATTTTACACACCTAGATAAAAGGAAGAATAAAGATAGATTTAAAAGCCTCAGAAAGTTTAGGGGTTTTTTTGTTAAAAAAAAAAGAAAAGAGTATAAAGTGCTTTTAATGCAGAATGGGGTGCTTTTGTTCACTGGTGCCTGGTAAAATGCTCTTTTGTCTCTACAGAAATCTTCATTAACCATGTCGTTGTG[G/A]TTTGCTGTCCTTCATGTTTTAGGTAGGTGATTTGTTTAATTGAAGCAACTGATACTTAACACTTCTAATACTGAATTATCATCAAATTTAATTATCATATGAATGCGTTTCTTTCTTTTTCACAGGTATTCTCTCTTTGAGCTGGTGCACTTCTGGATCTGAATTAAATGGTCAGTTTTTACAATCACTTCAGTGTATATCTTGTCATATTAAATATTGCTATAAAGTTGCAGCACATTTTTGTAAACTCTGACTTTCTTGTTTTTAATTGGGCTGATCAATAGCTAGGAGACATTTTTTATATAACAATTTAATTTATAGTTTTATTCATCCATTTTTTATAATTCATAAGTAGCTGAAAGATCTTTTAAAATACAATTATGTATGTAAAATGTAAAATACATTAAGTTTAAAATGTTTATTAGATTTGCTTCGTTTTTTAAAACCTTTTAAAATCTATTTAAGTGAAAAAAGTATTTTATTTATGTTTTCAGTAGCAC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa12192
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000000948 | Nonsense | 56 | 553 | 4 | 12 |
| ENSDART00000129448 | Nonsense | 56 | 553 | 3 | 11 |
Genomic Location (Zv9):
Chromosome 17 (position 28807424)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 17 | 28731351 |
| GRCz11 | 17 | 28748314 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CTGTCAGACACACATCTGCTGGTGCTCTGWCCAGCAAACTGCTCTCTGTG[G/A]AGCCTCTCAGTGTTTGGTTCTGGAGTTTATGCCTCTATTTCCAGCATATG
Long Flanking Sequence:
GAGACATTTTTTATATAACAATTTAATTTATAGTTTTATTCATCCATTTTTTATAATTCATAAGTAGCTGAAAGATCTTTTAAAATACAATTATGTATGTAAAATGTAAAATACATTAAGTTTAAAATGTTTATTAGATTTGCTTCGTTTTTTAAAACCTTTTAAAATCTATTTAAGTGAAAAAAGTATTTTATTTATGTTTTCAGTAGCACAGACATATTTTAAATATATAATTTACTTTATTTATTATTAAGGATTTATTTTACTAATTAATTAATAAATTTTTATCAGAAAAAGAACACACTTTATGACAAATTTTCCAGTCAAATGAATTTTTATCAGTATTTAAGAGACTTTTTAAAAACCTATTTATTGTTTATATGTTTGCTTTAAGTTTGATATTTGGTTTTAGTTGCAACGCCGATTAGCTGTGGGACTCGTGCGGTGGATCTGTCAGACACACATCTGCTGGTGCTCTGTCCAGCAAACTGCTCTCTGTG[G/A]AGCCTCTCAGTGTTTGGTTCTGGAGTTTATGCCTCTATTTCCAGCATATGCGGAGCAGCCATTCACAGGTACAGTTTTCACTTTAAACGATACAGTTGCAGACTTGCTAGACTCCAATAACAAGGAAACGTTTGTCTTTCATCCAGAGGAATCATAGGTCTGTCTGGTGGACCAGTGGAGGTTCACGGACTGCAAGGGAGGACAAACTACCTCAGCTCTTACGCTCATGGTGTTCAGTCGCAGTCACTGTCGCAATGGAGCGCATCGTTCACTGTGGCCCGTGAGTGGAGACAATTACTAATGCCAATTGGATGTGTAGATTTATTTACAGATTCAAAGATTTGCTGAACATAAATATTTTCATTACACTTGCACACAATCTCTAATCTAATCTAATCTAATCTAATCTAATCTAATCTAATCTATATATAATATAATATAACCCAATATAATATAAAATCACACAATATAATATAATAATTTGTCTAATCATTATATAT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa36439
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000000948 | Nonsense | 188 | 553 | 8 | 12 |
| ENSDART00000129448 | Nonsense | 188 | 553 | 7 | 11 |
Genomic Location (Zv9):
Chromosome 17 (position 28806178)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 17 | 28730105 |
| GRCz11 | 17 | 28747068 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GGCTTTGTTGCTGGATAGCAGCTACAACATCGGACAGCGGCGGTTCAACT[T/A]GCAGAAGAACTTTGTCAGTAAACTTGCAACCATGCTGAAGGTTGGGACAC
Long Flanking Sequence:
AGTATGATCTGTTTTCAATTCAGCCAAACTGTTCATATAAATAATATGATGTATACAATTGTTTAGATTATCATAGTAAATAAACGTAGCTTTAGACCTCTATATAAAGATTTGTCACGCTAACTTTGTTCTTTTGTCTCAGGAACAATTAGCTTGCCTTTGGAAGTGTCCAGCCAAACCAGCAGTTCTGCCACCGTCGCATCTGGAGCAGGTACTAAATGTTCATATAACTGAAGATATTTGACATGTGTGGGCTAAACTAAGCATTCCTATTTCTGTCTTGCAGCCAAGAAGCCAGTGAAAAAAATAGTGAAGAAGCCTCCTCCAGCAACAGCACACAAAGGTCTGTACTGGCTGATTTTCTTTTCTAAGAAACTTATTGTAAGTAGCGTGACGTGGCATGTGTGTTATTATATAATATTACCTTGTTCCAGATTGTCCAGTTGATATGGCTTTGTTGCTGGATAGCAGCTACAACATCGGACAGCGGCGGTTCAACT[T/A]GCAGAAGAACTTTGTCAGTAAACTTGCAACCATGCTGAAGGTTGGGACACAAGGTCCTCATGTAGGAGTGGTGCAAACCAGGTGATCTGTGCATAAACACAAGTCATTTATCATAGTGAGCACTTATCAAGAAGTCACCTATAATCCATGTCTTTCTTCCCAGTGAAACACCTCGAACTGAATTCTACCTGACAAACTATACGACAGCCAAAGATGTGACCTTTGCCATCAAAGAAATCCCGTACATTGGGGGCAATACCAATACAGGTTTAATAACTTCTCCTGAACTGCGTATTTCATATGAACGAATGGGTTGAACACATGAAATATTTTTGTAAGTAAATCATGCCACCCTTTAGAAGATGTAAACTGAACAAATGTAATTTATAGTGATGCACTTAAAATAAAATCCAAATAAATGAAGTATACACATGCATATATATTCTTAATTAATTTACATTTATAAAAAAATTGGTTGAGCAAATAAGTCGCTTGCTCCA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa23098
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000000948 | Nonsense | 213 | 553 | 8 | 12 |
| ENSDART00000129448 | Nonsense | 213 | 553 | 7 | 11 |
Genomic Location (Zv9):
Chromosome 17 (position 28806104)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 17 | 28730031 |
| GRCz11 | 17 | 28746994 |
KASP Assay ID:
2261-1171.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTGCAACCATGCTGAAGGTTGGGACACAAGGTCCTCATGTAGGAGTGGTG[C/T]AAACCAGGTGATCTGTGCATAAACACAAGTCATTTATCATAGTGAGCACT
Long Flanking Sequence:
AGTAAATAAACGTAGCTTTAGACCTCTATATAAAGATTTGTCACGCTAACTTTGTTCTTTTGTCTCAGGAACAATTAGCTTGCCTTTGGAAGTGTCCAGCCAAACCAGCAGTTCTGCCACCGTCGCATCTGGAGCAGGTACTAAATGTTCATATAACTGAAGATATTTGACATGTGTGGGCTAAACTAAGCATTCCTATTTCTGTCTTGCAGCCAAGAAGCCAGTGAAAAAAATAGTGAAGAAGCCTCCTCCAGCAACAGCACACAAAGGTCTGTACTGGCTGATTTTCTTTTCTAAGAAACTTATTGTAAGTAGCGTGACGTGGCATGTGTGTTATTATATAATATTACCTTGTTCCAGATTGTCCAGTTGATATGGCTTTGTTGCTGGATAGCAGCTACAACATCGGACAGCGGCGGTTCAACTTGCAGAAGAACTTTGTCAGTAAACTTGCAACCATGCTGAAGGTTGGGACACAAGGTCCTCATGTAGGAGTGGTG[C/T]AAACCAGGTGATCTGTGCATAAACACAAGTCATTTATCATAGTGAGCACTTATCAAGAAGTCACCTATAATCCATGTCTTTCTTCCCAGTGAAACACCTCGAACTGAATTCTACCTGACAAACTATACGACAGCCAAAGATGTGACCTTTGCCATCAAAGAAATCCCGTACATTGGGGGCAATACCAATACAGGTTTAATAACTTCTCCTGAACTGCGTATTTCATATGAACGAATGGGTTGAACACATGAAATATTTTTGTAAGTAAATCATGCCACCCTTTAGAAGATGTAAACTGAACAAATGTAATTTATAGTGATGCACTTAAAATAAAATCCAAATAAATGAAGTATACACATGCATATATATTCTTAATTAATTTACATTTATAAAAAAATTGGTTGAGCAAATAAGTCGCTTGCTCCAAAAAAATTGTCTAGGAATCAAGTGCAATAATAAATAACTCACTCACCCATAAAAATAGTTCATTTTTGGCACAT
Associated Phenotype:
Not determined