Busch Lab

ZMP

scn8ab

Ensembl ID:
ENSDARG00000018032
ZFIN ID:
ZDB-GENE-060906-2
Description:
sodium channel, voltage-gated, type VIII, alpha b [Source:RefSeq peptide;Acc:NP_001038648]
Human Orthologue:
SCN8A
Human Description:
sodium channel, voltage gated, type VIII, alpha subunit [Source:HGNC Symbol;Acc:10596]
Mouse Orthologue:
Scn8a
Mouse Description:
sodium channel, voltage-gated, type VIII, alpha Gene [Source:MGI Symbol;Acc:MGI:103169]

Alleles

There are 7 alleles of this gene:

Allele Name Consequence Status Availability
sa2298 Nonsense Available for shipment Available now
sa33912 Nonsense Available for shipment Available now
sa20765 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa2298
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000022761 Nonsense 198 1958 4 26
Genomic Location (Zv9):
Chromosome 6 (position 39389104)
Other Location(s):
Assembly Chromosome Position
GRCz10 6 39460704
GRCz11 6 39458240
KASP Assay ID:
554-2723.1 (used for ordering genotyping assays)
KASP Sequence:
CGAGGTTTCTGTATAGACGACTTCACCTTCCTCAGAGACCCCTGGAACTG[G/A]CTGGATTTCATGGTYATCTCTATGGCGTAAGTATGATAATGTYCTGTAAA
Long Flanking Sequence:
AATAGAGTCAGTAGTGCGTTCACACTGAAAGCTCTAAAAATATAGATTTTTTTATGATTTTTTTTTCACTATATCTTCCTTTCTGTTAAGCAGAAGAAAGAAACTCAAACAGGTTTGATTAAATAGTGGCAAAATTTGGATGTATGGGCGAACTATCCCTTTAATATGTCTGCCCAGTAAGATGCTAGAATAAAATTGTAAGGTAACATCATACTGTATATGTTGTCTTTGCTGTATCCAGTACCACAATACATTTTGACTTTTAGTAAAAAAGGTGGATGAAGCAGAAGAACTATTTAGAATAAACTAGCATTCAATTTAATACAAAAAGTATCTACAAAATATTATAAAATGCACATTACCTGCATGTTTGAACTCATTTTATCGCTCTATGTCAGGTACACCTTCACAGGAATCTACACTTTCGAGTCTCTCACAAAGATTGTGGCTCGAGGTTTCTGTATAGACGACTTCACCTTCCTCAGAGACCCCTGGAACTG[G/A]CTGGATTTCATGGTCATCTCTATGGCGTAAGTATGATAATGTCCTGTAAATTAAACAAGGAAATATTTTGATAATGATACACTTTAAATCTGTTTTTGCATGCAATGGTTGCAGGTTCATAAAACTCTTGTGTGCCGCATTTAACATTAGGCTTTAGTGGCGCTTCAGTTGGTGCCAGCTACTTTAGTAAAATTCTAGATAAAAAATCATCGCTTCAATTTTTGAAGTTACACATGCACTCACATCTCAAACAAGCAAGCTTCTTGTGATTGCTGCATATTTTTACACAGACTTTCAGATTTTTTTTTGGAAAATTGGCAGTGGTGGAAAGAGTAAAATCCTACGCAAGTAAAAGTACCATTAGTAGAATAAAAGTATCTGTTAGTTTCTACTCAAAGTATGAGTAAAAGTAACCCTTCTAAAAGTAGTGAGTATGCTACACTGAGAAAACAATTCCATCTTATAACCTGCAAATTAAAAATGTAGCTTAAATAAATGGT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa33912
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000022761 Nonsense 1310 1958 21 26
Genomic Location (Zv9):
Chromosome 6 (position 39329028)
Other Location(s):
Assembly Chromosome Position
GRCz10 6 39400628
GRCz11 6 39398164
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CGCTTTGGTGGGTGCCATTCCCTCCATCATGAATGTGCTGTTGGTGTGTT[T/A]GATCTTTTGGCTGATCTTCAGTATTATGGGTGTCAACCTGTTTGCTGGAA
Long Flanking Sequence:
AACTTAAAAGTTGACAATTGTATTTTTATGTATATATTAAAATATAATAATATATTATTACAGTATATAATTATAATATACTATAATTATAAAAGTTTGTAGAATATTATATTATATAATTATAATATATTATAATGAAAAACTTTTGTAGATTTAAATTCATGTAGATACCAAAATGTGATGAAGAATTCTATATATAGCTTATTTGTCATTATTAAACAACTGACAACAAAAACTAAATACTGTTGTCATGGAGATAAATTTTTCTTTGTCAAAGTATGTCATGTGAAAATGCGATTAAAATGAGCTTGGAGATATATACATTAAATGCTGGTCATTGGCATATCAAAATAGCTCAGTTTTGGTACATTACTCTAATACTTTTTCTGTCTTTTCTTGCCCACTTCCCCCGATTCTGTTGTTGTTTTTTACCCTGTAGGTTGTGGTGAACGCTTTGGTGGGTGCCATTCCCTCCATCATGAATGTGCTGTTGGTGTGTT[T/A]GATCTTTTGGCTGATCTTCAGTATTATGGGTGTCAACCTGTTTGCTGGAAAGTACTATTACTGCTTCAACCAGACTGCAGAGGAGTATTTTCAAGTCGACGTTGTCAATAACAAGACCGAATGCTTTGCACTCATCAATGCAAACTACACAGAAGTTCGCTGGAAGAACGTAAAGATCAATTTCGATAATGTGGGCGCAGGTTACCTGGCACTCTTGCAAGTGGTAAGACATTGTCCCTGTGTAAAAATTCTCTGAATACCCACTAACATCCCAGTTCTTAATGCTTGATGAGTAAACCAGTCTCTTCATGAATTCACAAATTATAAACACAAACATACAATTAAATATTAATGACTACCACTGTGGATTGAGCTAGTTGTTTTTCCATGACATAGGCTACATTCAAAGGCTGGATGGACATCATGTATGCTGCTGTGGATTCCAGAAAGGTATTTTTCTACTGTACATATTATATTTCTTTGCAAATGGAGACCCAAAT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa20765
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > G
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000022761 Nonsense 1554 1958 25 26
Genomic Location (Zv9):
Chromosome 6 (position 39325891)
Other Location(s):
Assembly Chromosome Position
GRCz10 6 39397491
GRCz11 6 39395027
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GTGGCCTTCACTGGCGAGTTCGTCCTGAAACTCTTTGCGCTGCGACACTA[T/G]TATTTCACCAATGGCTGGAATGTCTTTGACTGCGTCGTTGTCATTCTGTC
Long Flanking Sequence:
ATGTCGATTTCGATTACTTTTTAATTAATCGTCCAGCCCTATTTACATTTGAATACATTTTAAAATATTAATTCAACAGTTTTACATTTTCATTTGTCAATTGACTAAATTTATTTATTATATTACATTTAGCTACATTTATAAAAGTTTAAAATGGTATTTTAACTATTGATTTGTAATGTCATTTTTTATTTTATGAATTTCTTTAGCTTTTTTTATTATTAGATGAAGTCGCACTTCTAGTCCACTGTTGTAATTGTGCGCCAATGTGTGTTTTCTTTCTCATAGAACAAAATCCAGGGGATGGTATTTGACTTTGTCACTCAGCAGGCCTTTGATATTTCCATCATGATGCTCATCTGTCTTAACATGGTAACCATGATGGTGGAAACAGATGATCAGTCAGACGAGACAGAGAACATCTTGTATTGGATAAACTTCGTATTCATCGTGGCCTTCACTGGCGAGTTCGTCCTGAAACTCTTTGCGCTGCGACACTA[T/G]TATTTCACCAATGGCTGGAATGTCTTTGACTGCGTCGTTGTCATTCTGTCCATTGTGGGTAAGTGCTGTGTCTAAATGTTTTTTTCTGTTTTCTAAAGTACCCAGCATGAACTAGTACATCCTGACAGATTTTTCCTTTAAATTACCTTTCTATGGGATCTTATACAAAAAGATATTTGTGCAGATCTGTTTTTAAGTTCTGTTTTAAGTCAATTAGTTAGTCTTACTATTCTATCAAATTAAGTTAAGATCGTGGTGCAAAAAAATGAGTACACCCCAATTAGGAGAACTCAGAACATAACATTTGAATTCACCAGCAGATGAGTCAGATCAACTCCCACTTACTGCAATGCTGACACAATGACATCAAATGGAAAAATGCCACAATACAAGTGTCACTTTGATAAGGAAGGACAAAGCTATAGGAAAGCTTTGCTAGTAAGTATGAAAAATGTTGCTGTATGATAAAAAATAGAATTTTGGGACGATTGCTGGGAAAT
Associated Phenotype:
Not determined