ZMP
si:ch73-119j17.3
Ensembl ID:
ZFIN ID:
Human Orthologue:
PHF1
Human Description:
PHD finger protein 1 [Source:HGNC Symbol;Acc:8919]
Mouse Orthologue:
Phf1
Mouse Description:
PHD finger protein 1 Gene [Source:MGI Symbol;Acc:MGI:98647]
Alleles
There are 5 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa15490 | Nonsense | Available for shipment | Available now |
| sa22939 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa15490
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000080059 | Nonsense | 272 | 519 | 9 | 14 |
| ENSDART00000134471 | Nonsense | 277 | 326 | 10 | 11 |
Genomic Location (Zv9):
Chromosome 16 (position 48504181)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 16 | 45473402 |
| GRCz11 | 16 | 45440118 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GCTGTCAGACACGCCRAGGCAAGACCGTTGCCAAAACCTGCTCAACGCTT[T/A]AAACTCCCACAAAGACAGGTGAGACAYGGATTACGCTCGGAAAAAGGCTG
Long Flanking Sequence:
GAATTCCGTTATTTACAGGAGGCCTCCAAAATTTCCAGGGGCCCTAAGCAGATGCTTACCTTGCTTATTATTTAAATTCACCCCTGAATATAATGTTGTTTCTAAAATAAAGATTTTTTTCTCTATCAATTATAAATTCCACTTGCTTCAGACTAGCAAAAGAACTCAAATCATTAATTCATATATGTGCTATGAAGTGCGTTAGTGCTTCTGTCGACTTTTTCATAAAAGAAACATCAGCACAGAAAAGAAAACAGCAGTCGTTGAGCGATTTTTGCAAGTTTTTCAGCCTGTAAATGGGGTCATTTTGGATTTTCTGTTGACTTGAATGTATTCCCGAGTGTACTTTTGAATACTCTCTCTTGCAGTTTGTGGTCAATCTGAGCTCTTATCTTTCAAATGCATTTGTTCCACGCCGGCCTTCATTCCTTTCTGTATTTGTGTCTCTCAGCTGTCAGACACGCCGAGGCAAGACCGTTGCCAAAACCTGCTCAACGCTT[T/A]AAACTCCCACAAAGACAGGTGAGACACGGATTACGCTCGGAAAAAGGCTGATTTCCATACACCAGCCCATAGGGGGGTGTACTGCGGCGCACATTTGCAATAATATCAGCAAAAGCATTACTGTAATTGCTTTACATTATAAGTGGTTTTCCCCTCCCCACAAATAGTGTTTTGATAGCTGACGGTGGTTTCGTCTTTCAGAATAAATTATTTAAAGTCCATTTCCATTTTCTTTCTGTCAAGGTTAGTGGTTGATGCCCGCTCATACGCTGGCGCTTAAATAACCGAATCAGATGTTTTAGTTTGGCGGCCAGAAACAAATAAAAATCTGTCAGCGAGGCCTGAGGACAGCAGTTGAATACCAATGCAATCTGATTTGGGTTTATCCTAAAGGTTCGTCTCGGGGAAGGAAATCAAGAAGAAGAAATGTCTCTTCGGGCTCCAGGTTCGAGCTCCTCCCCCTCTGTCATCCGACCAATCACCTTTCATCGCCGAACAGC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa22939
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000080059 | Nonsense | 484 | 519 | 14 | 14 |
| ENSDART00000134471 | None | None | 326 | None | 11 |
Genomic Location (Zv9):
Chromosome 16 (position 48507703)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 16 | 45476924 |
| GRCz11 | 16 | 45443640 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CCTGCGGGACGTGCCTCCCTTCCACAGCCCCGTGGGCATGGCTGCACCAT[C/A]GAGCATGGGCTGGGCAGGAGGAGATGCTGTCCGAATCCTTGCCCGACGCG
Long Flanking Sequence:
ATACTGTTTAATGCTTGATTCTGATTGGCTAATGAACATTTATGGAGTGCTCTTATTCCTCAGAAAAACGCACAGCTAAAGTAATTCCAGGCAGATTAGTTAACACAGAAAGTTTTGGATGAGATGTGTAAGAAATTAGTTCTATATTAGGTCTGAGGACAAAAACATTGCTGTATTGTTTGTATTTTTACCAAAACCTGGTTCAATTACGTTTCAACAGCTCCTTTAGAAATATTACTCCCAGGAAAATACGTGATGTGTTGAATACTTTTCCCCCCACTGTATATTTAAAAGGCTTCTGGATGTTTTTTGATGTTTCATCTCTGTTTAAATGTCTGATGTTGTCCTCAGTGCAGAGGACCCTTGTGGACTTCCAGCTCCCTGCCTTCCGTGCTCTGTGTCGTCGGCTCACGCACCGGCGCAGCGCTATGAAAGCTGCCCTTCTCTCTTCCTGCGGGACGTGCCTCCCTTCCACAGCCCCGTGGGCATGGCTGCACCAT[C/A]GAGCATGGGCTGGGCAGGAGGAGATGCTGTCCGAATCCTTGCCCGACGCGTGACGGCCGACGGAAAGCTCCAGTACCTGGTGGAGTGGGGGAACGTGAGCGTCTACTGAAAACACCATCAACAGAGACCCAGGAAAGGGCTACAGACATGCGGATGAACTGCTAGAAAACTGTGAGAGGCTGTTTGGGACAAAACACACTGAAACACTTACAAATATATGTTTGGTCATACACTCACCGGCCACATTATTCAGAACTGTCTTAATCCCTGGAAAACCCTCTGGTACTGCAAATATTCCTTTTTGAAATGGAGATTTTGGTCCATATTGACATGATAGCATCACACAGTTGCTGTAGATTTGTTAGTTGCACATACATGATGTGAATCTCTCGTTCCACCACATCCCAAATGTGCTCTATTGGATTGAGTTCTGGTGACTGTGGAGGCCATTTGAGCACAGTGAACTCATTATCATGTTCAAGAAACAGTCTTAGATGATT
Associated Phenotype:
Not determined