Busch Lab

ZMP

robo1

Ensembl ID:
ENSDARG00000026784
ZFIN IDs:
ZDB-GENE-000209-3, ZDB-GENE-000209-3
Description:
roundabout homolog 1 [Source:RefSeq peptide;Acc:NP_571556]
Human Orthologue:
ROBO1
Human Description:
roundabout, axon guidance receptor, homolog 1 (Drosophila) [Source:HGNC Symbol;Acc:10249]
Mouse Orthologue:
Robo1
Mouse Description:
roundabout homolog 1 (Drosophila) Gene [Source:MGI Symbol;Acc:MGI:1274781]

Alleles

There are 15 alleles of this gene:

Allele Name Consequence Status Availability
sa44832 Nonsense Mutation detected in F1 DNA Not yet available
sa18311 Nonsense Available for shipment Available now
sa12940 Nonsense Available for shipment Available now
sa8915 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa35973 Nonsense Mutation detected in F1 DNA Not yet available
sa13462 Nonsense Available for shipment Available now
sa13877 Nonsense Available for shipment Available now
sa11384 Nonsense Available for shipment Available now
sa22712 Nonsense Available for shipment Available now
sa7411 Missense Mutation detected in F1 DNA Not yet available
sa16335 Essential Splice Site, Splice Site Available for shipment Available now
sa2786 Nonsense F2 line generated Not yet available

Mutation Details

Allele Name:
sa44832
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000034683 None None 1568 1 29
ENSDART00000076098 None None 1591 1 33
ENSDART00000097133 Nonsense 60 1632 1 28
ENSDART00000097134 None None 1533 None 29
ENSDART00000126856 None None 839 1 20
Genomic Location (Zv9):
Chromosome 15 (position 37505094)
Other Location(s):
Assembly Chromosome Position
GRCz10 15 39711854
GRCz11 15 39558906
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGGAGTGGTACAAAGATGGAGAACGAGTTGAAACCGACCGGGACAATCCT[C/T]GATCCCACCGCATGCTCCTGCCCACCGGATCTCTCTTCTTTCTCCGCATT
Long Flanking Sequence:
AANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGATAATGAAATTTACCATTGGCACAATTTTTTCATGAAATTGCTCATATATATATATATATATATATATATATATATATATATATAAGTAATATTTATTTAATATTTTTATTTTCTAATTATCCATTTATTTTGTCTTAATAAATTTGTTATTGTTCTTATTGTTTATTGAAACTAATAATTATATATTTGTTTAATTAAACATCTGTCCTTTCTGTTGTCAGGATCCCGTCTGCGGCAGGAAGATTACGCACCCCGTATTGTTGAACACCCCTCTGATCTGATCGTATCCAAAGGCGAACCGGCCACCCTAAACTGCAAGGCTGAAGGACGTCCCACGCCCACAGTGGAGTGGTACAAAGATGGAGAACGAGTTGAAACCGACCGGGACAATCCT[C/T]GATCCCACCGCATGCTCCTGCCCACCGGATCTCTCTTCTTTCTCCGCATTGTTCACGGCCGGCGCAGCAAACCCGACGAAGGCTCCTACGTTTGTGTGGCACGTAACTATCTGGGAGAAGCCGTCAGCCACAACGCCTCGCTGGAAGTAGCTAGTAAGTGCTTGGGTTCTTTCTGTTCACGCTGGATTTTTGAGTGTGAGATATATTAGGGCTGGGTGTTGATTTAATTCCGATTCACAATCTTAGGATTCGATTCTCTTTGATTTAGTGAATGTACTGTAGTGTTAATATAAATGAGTGAGTTGTTTACTGGACACTCACTCTGAACTGATCATTTGAATCATTTGAGTTGTTTACTGGAGACTTACTCTGAACAGATTAGTTGAATCAGTGAATAATTTAATGGAGACATACTCTTAACGGATTATTTGAACCAGTGATTTGTTTACTGTGAACTCTCTGAATGGATCATTTAAATCAGTGAATTGTTTGCTGGAGAC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa18311
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
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Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000034683 Nonsense 33 1568 1 29
ENSDART00000076098 Nonsense 33 1591 1 33
ENSDART00000097133 Nonsense 96 1632 1 28
ENSDART00000097134 None None 1533 None 29
ENSDART00000126856 Nonsense 33 839 1 20
Genomic Location (Zv9):
Chromosome 15 (position 37505204)
Other Location(s):
Assembly Chromosome Position
GRCz10 15 39711744
GRCz11 15 39558796
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CGGCGCAGCAAACCCGACGAAGGCTCCTAYGTTTGTGTGGCACGTARCTA[T/A]CTGGGAGAAGCCGTCAGCCAYAACGCCTMGCTGGAAGTAGCTAGTAAGTG
Long Flanking Sequence:
GAAATTTACCATTGGCACAATTTTTTCATGAAATTGCTCATATATATATATATATATATATATATATATATATATATATAAGTAATATTTATTTAATATTTTTATTTTCTAATTATCCATTTATTTTGTCTTAATAAATTTGTTATTGTTCTTATTGTTTATTGAAACTAATAATTATATATTTGTTTAATTAAACATCTGTCCTTTCTGTTGTCAGGATCCCGTCTGCGGCAGGAAGATTACGCACCCCGTATTGTTGAACACCCCTCTGATCTGATCGTATCCAAAGGCGAACCGGCCACCCTAAACTGCAAGGCTGAAGGACGTCCCACGCCCACAGTGGAGTGGTACAAAGATGGAGAACGAGTTGAAACCGACCGGGACAATCCTCGATCCCACCGCATGCTCCTGCCCACCGGATCTCTCTTCTTTCTCCGCATTGTTCACGGCCGGCGCAGCAAACCCGACGAAGGCTCCTACGTTTGTGTGGCACGTAACTA[T/A]CTGGGAGAAGCCGTCAGCCACAACGCCTCGCTGGAAGTAGCTAGTAAGTGCTTGGGTTCTTTCTGTTCACGCTGGATTTTTGAGTGTGAGATATATTAGGGCTGGGTGTTGATTTAATTCCGATTCACAATCTTAGGATTCGATTCTCTTTGATTTAGTGAATGTACTGTAGTGTTAATATAAATGAGTGAGTTGTTTACTGGACACTCACTCTGAACTGATCATTTGAATCATTTGAGTTGTTTACTGGAGACTTACTCTGAACAGATTAGTTGAATCAGTGAATAATTTAATGGAGACATACTCTTAACGGATTATTTGAACCAGTGATTTGTTTACTGTGAACTCTCTGAATGGATCATTTAAATCAGTGAATTGTTTGCTGGAGACTCACTGTGAACAGATCATTTGAATCAGTGGATTGTTTATTGGAGATTAACTGTGAACAGATCATTTGAATCAGTAAGTCATTTACTGGAGACCCCCCCTTAACAGATCAT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa12940
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
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Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000034683 Nonsense 76 1568 2 29
ENSDART00000076098 Nonsense 76 1591 2 33
ENSDART00000097133 Nonsense 139 1632 2 28
ENSDART00000097134 Nonsense 39 1533 2 29
ENSDART00000126856 Nonsense 76 839 2 20
Genomic Location (Zv9):
Chromosome 15 (position 37680004)
Other Location(s):
Assembly Chromosome Position
GRCz10 15 39540687
GRCz11 15 39387289
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ACGTGATGGTGGCAGCGGGGGAGCCAGCYGTMATGGAGTGCCAGCCGCCC[C/T]GAGGACACCCAGAGCCCACCATCTCCTGGAAGAAAGATGGGGTCAATATA
Long Flanking Sequence:
TGCACAGTATCTACATGACACTGAAAGGACCGCTGTCTGAGATTAAAGAGAACTAGCACAGCAAATCCATCAGAACGGTTACAGAGTTGACTAACATGCTTAAACTCCCAAATACACAGTGTTTTTTTGTGATCTCTCCACCGCTCGCATTAATATCACTCACACGCAGGAAGAGCTTCATGTTTCAGCCCCTCTTTTGTGCCTTTCAGCTAAAGTAAACAGCAGTTTTAGGTTCAGTCGCAGCGTGTTTGAAGTAGATTAGCGGTGGTTTGCGCTGGGCAAGAGTAGAGAAATGTTCCTCTCGCGGTTTCTAATTTGTTATTCCTCTCCTTTAAACATCAGCGTGAGTGGTTTCCTGATAGAAATGCAGTTCGTGTTTCTAATCTTTCTCTCTTTTTCTTTGTCTTTTTTTACCAGTTCTCCGAGATGATTTCCGACAGAACCCTGTGGACGTGATGGTGGCAGCGGGGGAGCCAGCTGTAATGGAGTGCCAGCCGCCC[C/T]GAGGACACCCAGAGCCCACCATCTCCTGGAAGAAAGATGGGGTCAATATAGACGACAGAGACGAGAGGATAACGGTAATCATATCTGACCAACTTTCCAACTTTCAAGAATGATTAGTGCTGGTTTGATGTTGGTGAAAGAACATTATTATGCTTTTAAGGCATTGTCTTTTGCGTTGATGCTCACTGGGCATGTGCATATCTTGCAGACATCCATACTTGCCATCTACTGCTTGCGTAGTGGTCATATGAGATGTGGGATATGAGAGTTTGATGATTCAGGGAATGATAGGCAGTTGTACAGAAGACCAATCAGAGAGCGACTGTGGATAACTCATGTTTTCAAAAGTTTGCTTTTAAAACTTAATATCAGTATTAAAACAGGGTGTTCAGTGCTTTTTAAAATGCGTAGTTTTTATGGGTTGAAAACAATAACAAAACCTATACGACAAAAAACCTATACGACAACAAAAACCCGCTCGTGTTAACAGTGCCTTAATA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa8915
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000034683 Essential Splice Site 140 1568 3 29
ENSDART00000076098 Essential Splice Site 140 1591 3 33
ENSDART00000097133 Essential Splice Site 203 1632 3 28
ENSDART00000097134 Essential Splice Site 103 1533 3 29
ENSDART00000126856 Essential Splice Site 140 839 3 20
Genomic Location (Zv9):
Chromosome 15 (position 37694763)
Other Location(s):
Assembly Chromosome Position
GRCz10 15 39526077
GRCz11 15 39372679
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CAACATGATGGGGGAACGAGAGAGCGAGATYGCGGAGTTGACTGTTCTCG[G/A]TAGGTTTTCAGTGCATTTCTGTTTTCATTTATGCGTTCCAGTGCATCCGA
Long Flanking Sequence:
ATTTTGAAGCCCTTCCCCTTCACACTCCTTTTCAAGGGCCAAGGGGAAGGTAGGGGTACAACAATAGAATTGGGATTGAGCCTAAATCAGCTTTTAGTTTGCTATGAGTAAATGATGCACAAAAACAAAGCCCCGCCCCCTACTTAATAGTCTGTTTCAGTTAGAAGTACCTCAACATCCTGAAATAAAAGCCTTTGCAATTTCCAGTTTACACCGACTTTAAAGCATAACTCTTTAATGCGATACATATATTGATTGATTTACTTAATTGTATAGTTTGAAGAAATCTTTACAGTTTAGAAGTATTTCCGAGTCCAAAGATGAAGGTTTTGACCTTTAACTCTCACATTTACGACTTCTCATGTTTTGTTTCCGACAGATACGAGGAGGAAAGCTCATGATCACCAACACCAGAAAAACGGACGCGGGGAAGTACGTGTGCGTGGGAACCAACATGATGGGGGAACGAGAGAGCGAGATCGCGGAGTTGACTGTTCTCG[G/A]TAGGTTTTCAGTGCATTTCTGTTTTCATTTATGCGTTCCAGTGCATCCGACAACAAGACTCTCATATGCTCCACCACATGATCAGCCTTCTTCAAGACCCACATGTGTAAATGTAATCAGGTTCCCACACAAACCCCTGGTGCATTCAGTTGTGGAAATGCATGCAGATGGATTCACTTAAAACACACTCACACATACACGTCGCATGAAGTGTTTGTTTATGGGCAGAGCAGGAGAGAGTCCAGATGTTTAGAGTTTGTGTGCTTAGCTGTAGGAAGACTCCAGCATGTCATTGACCCTGTTTAGCTGACACGGACCCATAAACCTTATCCTCAGTTTGCCATGAAACAAATACCAGCTTGCGCTTCACACACTCATTCGTTCGCACATGCAAACCAAAAATATACACTGATCTGTCATCCAACACCTTAACATATCGGTTTACACTACCCAACATCAGAGCTGGCACCTTTGACCTTCCCTTCGTAATCCCTGCAGTG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa35973
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000034683 Nonsense 583 1568 14 29
ENSDART00000076098 Nonsense 580 1591 13 33
ENSDART00000097133 Nonsense 647 1632 13 28
ENSDART00000097134 Nonsense 548 1533 14 29
ENSDART00000126856 Nonsense 583 839 14 20
Genomic Location (Zv9):
Chromosome 15 (position 37730276)
Other Location(s):
Assembly Chromosome Position
GRCz10 15 39492953
GRCz11 15 39339555
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATCAATTAAATATCCATGTGTTTTTGTCCTGTTGTTGTGTTCAGGTGGAG[C/T]AGCAGTCTCAGTATATTCAGGGCTATAAGGTGATGTACCGTCCGTCTCCA
Long Flanking Sequence:
TACGGCAGTTTGCGTTCACTGAACAGTAAGAATGATTAATTAATCCATATGAAACAGTCCCTTAAAAGTCACGTCTCGCTTCCAGTTTCGGGCTTAGGCGCGTTTTGCACTCACACTACAAGTGTACCGCGCCAAAGCCCAAGTGAACCGCGCTCAGGCACACCTCTTCAAACCGGGCCAGGGCCGGCCAAGTGAACCGTGCTTGAGACCGATTCAGAGCACTCACACTTCTCAAACGATCCGGGAAATGGGCCTGGGCACGGTTTGGATAGCATAGTGTGAGTAGGCCCTAAGTCACACTGATGGGTGCTGAGTTTTTAAATAGTGTTTTACCATGACTGTAAAATGCCACTTAGGTGCTACCATTGACATCAACAGAAAACAAACACTTAGCTTGAGATAAAACACTTCATTGGACAAGCAGCCTAAGACTAATGAGATTAAAATAGGATCAATTAAATATCCATGTGTTTTTGTCCTGTTGTTGTGTTCAGGTGGAG[C/T]AGCAGTCTCAGTATATTCAGGGCTATAAGGTGATGTACCGTCCGTCTCCAGAAGGCGCTCCGCAGCGAGTGGATTGGGCCATGTTTGAGGTCGGAGCCCCGGGGGAGCACAGCGCTGTCGTCACCCAGCTCAAGAAGGGCATCACCTATGAGTTCAAAGTGCGCCCTTTCTTCAATGAGTTCCAGGGCACCGACAGCGACATCAAAGTGGGAAAGACCCTGGAGGAGGGTGAGAATCTGACCGACTGTTCCGCTCCTTTCTCATTCAATCACTGAAGTCATTGTACAAATGAGACGGGAACATTTGCTGCCTCATACAATTATATTATAAACGTGTAAAAGTATTTTTATTTTCAAATATACACATTATACAAAATGTGTCTTGCACATTATACAGCAAGACATATACAAAATAAAAGTGTGACTGTCAGTGTTTTATTTACTATAATAATTATTATTAGTGCTTTTTAAAAAGCACTAATAATAATGATTAAAGTAAAT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa13462
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
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Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000034683 Nonsense 587 1568 14 29
ENSDART00000076098 Nonsense 584 1591 13 33
ENSDART00000097133 Nonsense 651 1632 13 28
ENSDART00000097134 Nonsense 552 1533 14 29
ENSDART00000126856 Nonsense 587 839 14 20
Genomic Location (Zv9):
Chromosome 15 (position 37730290)
Other Location(s):
Assembly Chromosome Position
GRCz10 15 39492939
GRCz11 15 39339541
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CATGTGTTTTTGTCCTGTTGTTGTGTTCAGGYGGAGCAGCAGTCTCAGTA[T/A]ATWCAGGGCTAKAAGGTGATGTACCGTCCSTCTCCAGAAGGCGCTCCGCA
Long Flanking Sequence:
TTCACTGAACAGTAAGAATGATTAATTAATCCATATGAAACAGTCCCTTAAAAGTCACGTCTCGCTTCCAGTTTCGGGCTTAGGCGCGTTTTGCACTCACACTACAAGTGTACCGCGCCAAAGCCCAAGTGAACCGCGCTCAGGCACACCTCTTCAAACCGGGCCAGGGCCGGCCAAGTGAACCGTGCTTGAGACCGATTCAGAGCACTCACACTTCTCAAACGATCCGGGAAATGGGCCTGGGCACGGTTTGGATAGCATAGTGTGAGTAGGCCCTAAGTCACACTGATGGGTGCTGAGTTTTTAAATAGTGTTTTACCATGACTGTAAAATGCCACTTAGGTGCTACCATTGACATCAACAGAAAACAAACACTTAGCTTGAGATAAAACACTTCATTGGACAAGCAGCCTAAGACTAATGAGATTAAAATAGGATCAATTAAATATCCATGTGTTTTTGTCCTGTTGTTGTGTTCAGGTGGAGCAGCAGTCTCAGTA[T/A]ATTCAGGGCTATAAGGTGATGTACCGTCCGTCTCCAGAAGGCGCTCCGCAGCGAGTGGATTGGGCCATGTTTGAGGTCGGAGCCCCGGGGGAGCACAGCGCTGTCGTCACCCAGCTCAAGAAGGGCATCACCTATGAGTTCAAAGTGCGCCCTTTCTTCAATGAGTTCCAGGGCACCGACAGCGACATCAAAGTGGGAAAGACCCTGGAGGAGGGTGAGAATCTGACCGACTGTTCCGCTCCTTTCTCATTCAATCACTGAAGTCATTGTACAAATGAGACGGGAACATTTGCTGCCTCATACAATTATATTATAAACGTGTAAAAGTATTTTTATTTTCAAATATACACATTATACAAAATGTGTCTTGCACATTATACAGCAAGACATATACAAAATAAAAGTGTGACTGTCAGTGTTTTATTTACTATAATAATTATTATTAGTGCTTTTTAAAAAGCACTAATAATAATGATTAAAGTAAATAAATAATAAATACT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa13877
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
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Mutation:
T > G
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000034683 Nonsense 591 1568 14 29
ENSDART00000076098 Nonsense 588 1591 13 33
ENSDART00000097133 Nonsense 655 1632 13 28
ENSDART00000097134 Nonsense 556 1533 14 29
ENSDART00000126856 Nonsense 591 839 14 20
Genomic Location (Zv9):
Chromosome 15 (position 37730302)
Other Location(s):
Assembly Chromosome Position
GRCz10 15 39492927
GRCz11 15 39339529
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TCCTGTTGTTGTGTTCAGGYGGAGCAGCAGTCTCAGTAWATWCAGGGCTA[T/G]AAGGTGATGTACCGTCCSTCTCCAGAAGGCGCTCCGCAGCGAGYGGATTG
Long Flanking Sequence:
TAAGAATGATTAATTAATCCATATGAAACAGTCCCTTAAAAGTCACGTCTCGCTTCCAGTTTCGGGCTTAGGCGCGTTTTGCACTCACACTACAAGTGTACCGCGCCAAAGCCCAAGTGAACCGCGCTCAGGCACACCTCTTCAAACCGGGCCAGGGCCGGCCAAGTGAACCGTGCTTGAGACCGATTCAGAGCACTCACACTTCTCAAACGATCCGGGAAATGGGCCTGGGCACGGTTTGGATAGCATAGTGTGAGTAGGCCCTAAGTCACACTGATGGGTGCTGAGTTTTTAAATAGTGTTTTACCATGACTGTAAAATGCCACTTAGGTGCTACCATTGACATCAACAGAAAACAAACACTTAGCTTGAGATAAAACACTTCATTGGACAAGCAGCCTAAGACTAATGAGATTAAAATAGGATCAATTAAATATCCATGTGTTTTTGTCCTGTTGTTGTGTTCAGGTGGAGCAGCAGTCTCAGTATATTCAGGGCTA[T/G]AAGGTGATGTACCGTCCGTCTCCAGAAGGCGCTCCGCAGCGAGTGGATTGGGCCATGTTTGAGGTCGGAGCCCCGGGGGAGCACAGCGCTGTCGTCACCCAGCTCAAGAAGGGCATCACCTATGAGTTCAAAGTGCGCCCTTTCTTCAATGAGTTCCAGGGCACCGACAGCGACATCAAAGTGGGAAAGACCCTGGAGGAGGGTGAGAATCTGACCGACTGTTCCGCTCCTTTCTCATTCAATCACTGAAGTCATTGTACAAATGAGACGGGAACATTTGCTGCCTCATACAATTATATTATAAACGTGTAAAAGTATTTTTATTTTCAAATATACACATTATACAAAATGTGTCTTGCACATTATACAGCAAGACATATACAAAATAAAAGTGTGACTGTCAGTGTTTTATTTACTATAATAATTATTATTAGTGCTTTTTAAAAAGCACTAATAATAATGATTAAAGTAAATAAATAATAAATACTACTACTACTACT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa11384
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000034683 Nonsense 632 1568 14 29
ENSDART00000076098 Nonsense 629 1591 13 33
ENSDART00000097133 Nonsense 696 1632 13 28
ENSDART00000097134 Nonsense 597 1533 14 29
ENSDART00000126856 Nonsense 632 839 14 20
Genomic Location (Zv9):
Chromosome 15 (position 37730425)
Other Location(s):
Assembly Chromosome Position
GRCz10 15 39492804
GRCz11 15 39339406
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CCGGGRGAGCACAGYGCTGTCGTCACCCAGCTCAAGAAGGGCATCACCTA[T/A]GAGTTCAAAGTGCGCCCTTTCTTCAATGAGTTCCAGGGCACCGACAGCGA
Long Flanking Sequence:
GCGCTCAGGCACACCTCTTCAAACCGGGCCAGGGCCGGCCAAGTGAACCGTGCTTGAGACCGATTCAGAGCACTCACACTTCTCAAACGATCCGGGAAATGGGCCTGGGCACGGTTTGGATAGCATAGTGTGAGTAGGCCCTAAGTCACACTGATGGGTGCTGAGTTTTTAAATAGTGTTTTACCATGACTGTAAAATGCCACTTAGGTGCTACCATTGACATCAACAGAAAACAAACACTTAGCTTGAGATAAAACACTTCATTGGACAAGCAGCCTAAGACTAATGAGATTAAAATAGGATCAATTAAATATCCATGTGTTTTTGTCCTGTTGTTGTGTTCAGGTGGAGCAGCAGTCTCAGTATATTCAGGGCTATAAGGTGATGTACCGTCCGTCTCCAGAAGGCGCTCCGCAGCGAGTGGATTGGGCCATGTTTGAGGTCGGAGCCCCGGGGGAGCACAGCGCTGTCGTCACCCAGCTCAAGAAGGGCATCACCTA[T/A]GAGTTCAAAGTGCGCCCTTTCTTCAATGAGTTCCAGGGCACCGACAGCGACATCAAAGTGGGAAAGACCCTGGAGGAGGGTGAGAATCTGACCGACTGTTCCGCTCCTTTCTCATTCAATCACTGAAGTCATTGTACAAATGAGACGGGAACATTTGCTGCCTCATACAATTATATTATAAACGTGTAAAAGTATTTTTATTTTCAAATATACACATTATACAAAATGTGTCTTGCACATTATACAGCAAGACATATACAAAATAAAAGTGTGACTGTCAGTGTTTTATTTACTATAATAATTATTATTAGTGCTTTTTAAAAAGCACTAATAATAATGATTAAAGTAAATAAATAATAAATACTACTACTACTACTACTACTACTACTAATAATAATAATAATAATAATAATAATAATAATAATAGGAAGAAGACGAAGAAGAATAATTAATAATAATATACAAAATAAAATATCAGTGTATTATTATTATTATTATTA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa22712
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000034683 Nonsense 665 1568 15 29
ENSDART00000076098 Nonsense 662 1591 14 33
ENSDART00000097133 Nonsense 729 1632 14 28
ENSDART00000097134 Nonsense 630 1533 15 29
ENSDART00000126856 Nonsense 665 839 15 20
Genomic Location (Zv9):
Chromosome 15 (position 37735271)
Other Location(s):
Assembly Chromosome Position
GRCz10 15 39488050
GRCz11 15 39334652
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GTGTGTAGAATTTAATTTGTGTTTTCTTTTCAGCTCCCAGCGCTGCTCCC[A/T]GAGGCGTCACCGTAACAGGAAGTGGAGACAACGGCACAGCAGTCCTGGTC
Long Flanking Sequence:
CATTACTGTGTGAAAGGGGCTAATTACCATAACTTTGTTAAGCGTTTAAATGTCACTTTAAGCTGTATAGAAGTGTCTTAAAAAATATCTAGTCAAATATTATTTTCTGTCATCATGGCAAAGATAAAATAAATCAGTTATTAGAGATGAGTTATTAAAACTATTATGATTAGAAATGTGTTGAACAAATGTTATTCACGTCGAATTGGGAAATAAATTAGAAATTAGTAATTTATGATTAACAATAAATATTATGGTGTCTAATTATGCAAAAATGCTATTATTGTGACTTTTTTCAATTCAATTATAAATAATTAAATTACAATTAAAATATAATTATACTTTTTCTTCTAAATTATGATAAATGTCGAATTTTTAAAAAATATATCAAATATGTATATTAGAATTTATCAGGCGTAATTATCCACAAATGCAGGTTGATATTGTAAGGTGTGTAGAATTTAATTTGTGTTTTCTTTTCAGCTCCCAGCGCTGCTCCC[A/T]GAGGCGTCACCGTAACAGGAAGTGGAGACAACGGCACAGCAGTCCTGGTCGCCTGGCAACCGCCGCCAGAGGAGGAGCAGAACGGCGTTGTGCAGGAGTACAAGGTAAAACCCAAACACAACAGACAAAGGGAACACGAAAAAACTCAGCTTAATGAAGTGCTGGAGTAAAAGAGGAAATAGGAAGAGAAAGAGAAAATATATTTACTTAGTTACACGCTCCATTCAGAATATGGTGTGCTTCTGAATGAATGAGGGGAGTTTAGCGGGTAAGTTAATGGGAGGATTTTCATTGAGGGGAATTTTGGTGTTGTGACTTGCTGCCACCTAGTGGTTCATAAAGGGCATTACTACAACCTCAGACGCGCTCATATTGGGAATATTTATATAATTACCAACATCTCTGTCTCCAGGGTTTCCGCGGGATCTTAAAAATTCTTGAAATGTCTTGCATCTTAAAAGCAAAATTTTAGGCCTTAAAACATTTTAAATCTACTTAAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa7411
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > A
Consequence:
Missense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000034683 Missense 764 1568 17 29
ENSDART00000076098 Missense 761 1591 16 33
ENSDART00000097133 Missense 828 1632 16 28
ENSDART00000097134 Missense 729 1533 17 29
ENSDART00000126856 Missense 764 839 17 20
Genomic Location (Zv9):
Chromosome 15 (position 37747357)
Other Location(s):
Assembly Chromosome Position
GRCz10 15 39476363
GRCz11 15 39322965
KASP Assay ID:
554-4271.1 (used for ordering genotyping assays)
KASP Sequence:
GTCATGTTYTCCTTGTGTGTNTTTTTTCAGACTCTTCTGGCCGTGTTCTC[C/A]MGCCGCCRCTGGACGAMGATAACACCATTTCCCAGCAGATMTCAGACGTGG
Long Flanking Sequence:
ATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAATATGTTATTATATTATTATTATACTGTTAATACATTATATTTTAATAATAATGTGTAAAAGCTTGTTTGATCTTTTTTGTTGACTTGCAAATGAGCATATTACTCTTTTTAACAAGCATACTTTATCTTTGAATTACATTAATTTACTTACATTAATGTACCATTATATTATATTTATTAACTATATTTTATTTAATATGTTGATATACTTGTCACACTAAATTGGGATTACAGACTATTACCTTTCAAAATCATCAGCAGTAATGGTTGCACCAGCGCTGTGGTTGTCATCAGAAGTCATGTTCTCCTTGTGTGTTTTTTTCAGACTCTTCTGGCCGTGTTCTCC[C/A]GCCGCCGCTGGACGACGATAACACCATTTCCCAGCAGATCTCAGACGTGGTGCGTCAGCCGGCTTTCATCGCGGGCATCGGCGCCGCCTGCTGGATCATCCTGATGGTGTTCAGCATCTGGCTATACCGCCACCGCAAGAAGAGGAACGGCCTCAGCAGCAGCTACGCCGGCATCCGCAAAGGTCAGTTCACACTCAGGCTTTTCTTTTAACAGTGGTTAAACAGCAAGAAGGTCGCTGGTTCAAGTCCCGCTGGCCCAGTTGCCATTTCTGTGTGGAGTTTGCATGTTCTCCGCCTGTTGGTGTGGGTTTCCTAATTGTGCTCTGGTTTCCCCCAGAGTCCAAAGACATGTGCTATAGGGCATTTACTGCGTAAAACATAGTGAAAGTAGTTAGCGGTTCATTCCGCTGTAGTGAAGCACATCTTTTGGTTGAGTAAGCTGTCGTCTAAACAGCCTCTTAGTTTATGTGCAAGTCCAGATCAGACATCGACTGAATTAC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa16335
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Essential Splice Site, Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000034683 Splice Site None 1568 None 29
ENSDART00000076098 Splice Site None 1591 None 33
ENSDART00000097133 Splice Site None 1632 None 28
ENSDART00000097134 Essential Splice Site 864 1533 21 29
ENSDART00000126856 None None 839 None 20
Genomic Location (Zv9):
Chromosome 15 (position 37765520)
Other Location(s):
Assembly Chromosome Position
GRCz10 15 39459011
GRCz11 15 39305613
KASP Assay ID:
2260-8905.1 (used for ordering genotyping assays)
KASP Sequence:
TCCGTAATCAAGTCCTTTGGCTTCCAAAWTGTCTTACTCCTCTTCTATCA[T/A]CCAGCCGACTGCATYGCCAACTWCAGCAACCAGATGGACAACAAGGCCAC
Long Flanking Sequence:
CTTGGCTTGTGCCTTGGTCGAGAGAGAAGCTGCAGGCAAGAAGATTGTACGGCGTCAGGGATTTTGGCGGAATGAGTGTTATTTTAGTATTTCGAGTATTCCACATTGCCTTCTTCGAAATTTCTGAAAACATCACTAGCATGGGCACAAAACTAATTAGCATATGCACTACCAGTCAGTTTGCAGTCTTAGCTTTACATTACATTTAAAACGTTCTCTATGAAAGAATCCTAGAAGTCAAATGTATCACAGTTTCAGTGACACTATGAAGCAAGACTACATGTTTTCAGCACTGCTAATTATAAGAATTGTTATTAATGAACATAAACAAACCTTACTGTTTCCCAACTTTTCACTGGATTAAAACCATCCTAGTGAGTTTCTAAACATCCCTCCTGTTAAAAGCACTCTTGATACATCCAAACTACAGTATATTAGAATCAAGATATATCCGTAATCAAGTCCTTTGGCTTCCAAAATGTCTTACTCCTCTTCTATCA[T/A]CCAGCCGACTGCATCGCCAACTACAGCAACCAGATGGACAACAAGGCCACCAACCTGCTGGCTCCAGATACTGGGCTTTACAGCGACGTTGACCTTTCAAACAAGATCAACGAGATGAAGACCTTCAACAGCCCCAACCTGAAGGACGGGCGTTTTATGGGGCCTGGTGGTCAACCCACACCCTACGCCACCACTCAGCTCATTCAATCCAGCCTGGCCAACAACAACATGAACAGCAGCAGTGGCGGAAGCGGAGGAGGAAGCGCTGACTTTAATGAGAAGCAGAGCTGGAAGAGCAGCCAGGGAACACCTCAGAAACAGGCCGACATCAACACACCACTGCAGTATAACGTCATGGAACAAAACAAACTCAACAAGGGTGAGTTTTTATGGATTTCCTCGCAGTCCCTGAAAACTAGGGATGCACCGAAATGAAAAGTCTGGATGCACTTGGCCAAAAACTAAAACCGAAAATGGTTTGTTATAATTAATTTATAGTT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa2786
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000034683 Nonsense 1288 1568 25 29
ENSDART00000076098 Nonsense 1311 1591 29 33
ENSDART00000097133 Nonsense 1352 1632 24 28
ENSDART00000097134 Nonsense 1253 1533 25 29
ENSDART00000126856 None None 839 None 20
Genomic Location (Zv9):
Chromosome 15 (position 37774324)
Other Location(s):
Assembly Chromosome Position
GRCz10 15 39450213
GRCz11 15 39296815
KASP Assay ID:
554-2510.1 (used for ordering genotyping assays)
KASP Sequence:
CTGTGACCTGGAGAGCTCTGTGACYGGGTCTATGATTAACGGATGGGGTT[C/A]GGCTTCAGAAGAGGACAACGCCTCRTCAGGCCRTTCCAGTGCAGTCAGCT
Long Flanking Sequence:
TTAATGTATCTTGTATAAAAAGATTACTCATGTATTTCGAGTAATCTGTGTTGTAGTAATGAGTTATGAAAGGAAAAAAAATCCCCTACTATATTCTGGTGGAAAAGCAAAGCGAGTCGAGTCATACCACACAATGTAAACATGACTTTTGTTAACTATATGTGCATTTCTCACAGTTTTGCTTTATATGTGTGTTAGGAGACTGTTAGTGAGTCCACCTCCTCCACCACGACCTCTCTCTCCTCCACACACATACGGCTACATCTCCAGTCCCCTCGGCCTGGACACGGACGGCCTAGAGGAAGAGGATGATGATGAAGAAGAGGGTGACGAAACGGACGCAGAGGTAGCTCGAGTCCACCAGCACCACATGATGCACCCTCACCAGCAGCACTTGCCCCAGCAGAGGGCTCTCCTGCGGGGTCTGGAACAAACCCCGGCCTCCAGCACCTGTGACCTGGAGAGCTCTGTGACTGGGTCTATGATTAACGGATGGGGTT[C/A]GGCTTCAGAAGAGGACAACGCCTCGTCAGGCCGTTCCAGTGCAGTCAGCTCATCGGATGGATCGTTCTTTACCGATGCCGATTTCGCCCAGGCTGTGGCAGCTGCGGCTGAATATGCTGGTCTTCGAGTGGCAAAGCATCCTGGGAAAGGACATCATCAGCTTCCAGTGTCTGGAGGTATTGGAATATGTGCATATGTAATTTTTGACCAATAACCGATAATTCCTTCGATTTAAATGACAATGATATATAGGGAAGAGGTATGGGGAAACATGTCATGTTTTTTCCTGGGAATAATATTTCTAAAGGAGGTGTTGACATGGAATTGAACCAGATTTTGGTAAAAACTTAAACAATCGAAACATTAAAAAAAAAAAAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATGCTTAATAACAATGGATTGACACAAGGATAAAGTACTGAACTACTGATATAAAACATCAGCTT
Associated Phenotype:
Not determined