ZMP

tnfb

Ensembl ID:

ENSDARG00000013598

ZFIN ID:

ZDB-GENE-050601-2

Description:

tumor necrosis factor (TNF superfamily, member 2) [Source:RefSeq peptide;Acc:NP_001019618]

Human Orthologues:

LTA, TNF

Human Descriptions:

lymphotoxin alpha (TNF superfamily, member 1) [Source:HGNC Symbol;Acc:6709]
tumor necrosis factor [Source:HGNC Symbol;Acc:11892]

Mouse Orthologues:

Lta, Tnf

Mouse Descriptions:

lymphotoxin A Gene [Source:MGI Symbol;Acc:MGI:104797]
tumor necrosis factor Gene [Source:MGI Symbol;Acc:MGI:104798]

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa22693	Essential Splice Site	Available for shipment	Available now
sa22694	Splice Site, Nonsense	Available for shipment	Available now

Mutation Details

Allele Name:

sa22693

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC

Mutation:

G > A

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000017569	Essential Splice Site	60	242	1	4

Genomic Location (Zv9):

Chromosome 15 (position 33996070)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	15	34841846
GRCz11	15	34699815

KASP Assay ID:

2260-8809.1 (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

TTGTTGGCCTCTGCGTTGTGGCTGCATTTTTCTTCACCTGGCATGTGATG[G/A]TAAGACTGAAATTTCATTGAGGGATGATCATTGGAATAATGAAACATTCT

Long Flanking Sequence:

CACATTTAATCTACTAACAGGTTTTTGAAAGTGTAAAGTGAAAAGCCTATTATATTTACTACTATCTTTCCGGCAGAAGTGTGAGGGTGTGTATGTGCAAGCGCCGTGTCTGGAGGTTTGTGTGTGGGTGGAAAGTTGGTGTTTGAGAGCTGAGGGTGTTCTTTCCCCTTTCAAACCAACCTCTGTTCCTGAAGCCGCTTGCTGGCTTACATCACTGGAGTTTCCCCTATCTTTAGTGTATATAAATGACAGAGCAGACAAGTTCAGTTCATACACAAAAACTCAGTAAAAAAAGGAACACAGCAAGGAGAACTAGCAGCATGGTGAGATACGAAACAACATTAGTAGATATGGAAGCCGGTGTCGGGGGAGTTTATCAGACAACCGTGGCACCTGTACCGGTTAATTCTTCAAGAAGCTGGATATGGAAGACACTCGCTGCAGTTGCTTTTGTTGGCCTCTGCGTTGTGGCTGCATTTTTCTTCACCTGGCATGTGATG[G/A]TAAGACTGAAATTTCATTGAGGGATGATCATTGGAATAATGAAACATTCTTGAAATACCTTATTTAAAAAGCAATGTCTTTTGCAGAAGCCAAACGAAGAAGGTCAGAAACCCAACAGAGAACATCTAAAACAACAAATCACCACACCTTCAGGTTAATAACATTCCCAGTATTCCATCTTGTACTTTTGTTTTGCTTTTCTTTTTCTAAAACAACTCCTTTTTGGGCATTGATGGTTACATTTCTATACTTAATAACACTTAGAAAAAAACATGACTTCTTTTAGAACTGTTCAATGAAAATTTAAGAGTTAATATCATTAAACAAAGTGTAACTATTAAACTTGTAACCCAATGTTGGACAATATATGGACAACATACAGCCAAACTGTCTTGTTTTTGGGATGTTGCACATTGGTCAGTCTTGTGGCTGTTTTAAATGTGCTAAATCAATAATCTTAAGCTAGATTTGTCCATATTTGATCCAACATTGGGTTTTGA

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa22694

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC

Mutation:

C > A

Consequence:

Splice Site, Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000017569	Splice Site, Nonsense	82	242	2	4

Genomic Location (Zv9):

Chromosome 15 (position 33996221)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	15	34841997
GRCz11	15	34699966

KASP Assay ID:

2260-8810.1 (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

AGGTCAGAAACCCAACAGAGAACATCTAAAACAACAAATCACCACACCTT[C/A]AGGTTAATAACATTCCCAGTATTCCATCTTGTACTTTTGTTTTGCTTTTC

Long Flanking Sequence:

GAGGGTGTTCTTTCCCCTTTCAAACCAACCTCTGTTCCTGAAGCCGCTTGCTGGCTTACATCACTGGAGTTTCCCCTATCTTTAGTGTATATAAATGACAGAGCAGACAAGTTCAGTTCATACACAAAAACTCAGTAAAAAAAGGAACACAGCAAGGAGAACTAGCAGCATGGTGAGATACGAAACAACATTAGTAGATATGGAAGCCGGTGTCGGGGGAGTTTATCAGACAACCGTGGCACCTGTACCGGTTAATTCTTCAAGAAGCTGGATATGGAAGACACTCGCTGCAGTTGCTTTTGTTGGCCTCTGCGTTGTGGCTGCATTTTTCTTCACCTGGCATGTGATGGTAAGACTGAAATTTCATTGAGGGATGATCATTGGAATAATGAAACATTCTTGAAATACCTTATTTAAAAAGCAATGTCTTTTGCAGAAGCCAAACGAAGAAGGTCAGAAACCCAACAGAGAACATCTAAAACAACAAATCACCACACCTT[C/A]AGGTTAATAACATTCCCAGTATTCCATCTTGTACTTTTGTTTTGCTTTTCTTTTTCTAAAACAACTCCTTTTTGGGCATTGATGGTTACATTTCTATACTTAATAACACTTAGAAAAAAACATGACTTCTTTTAGAACTGTTCAATGAAAATTTAAGAGTTAATATCATTAAACAAAGTGTAACTATTAAACTTGTAACCCAATGTTGGACAATATATGGACAACATACAGCCAAACTGTCTTGTTTTTGGGATGTTGCACATTGGTCAGTCTTGTGGCTGTTTTAAATGTGCTAAATCAATAATCTTAAGCTAGATTTGTCCATATTTGATCCAACATTGGGTTTTGACAACCCAACATTGGTTTAGAGTGTATTCATTATGTGATTTGTACAGAAAAAGGGAAGCATATAGACTTATAAAACAAACATAGAAGTCACTTATTCAACAAACATACACTGTTAAAGTATCCTGGTTGCCTTCAATTTTTAAGCTGAATCA

Associated Phenotype:

Not determined