ZMP
pcdh10b
Ensembl ID:
ZFIN ID:
Description:
protocadherin 10b [Source:RefSeq peptide;Acc:NP_878305]
Human Orthologue:
PCDH10
Human Description:
protocadherin 10 [Source:HGNC Symbol;Acc:13404]
Mouse Orthologue:
Pcdh10
Mouse Description:
protocadherin 10 Gene [Source:MGI Symbol;Acc:MGI:1338042]
Alleles
There are 4 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa22534 | Nonsense | Available for shipment | Available now |
| sa1760 | Nonsense | Available for shipment | Available now |
| sa42436 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
| sa42437 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa22534
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000052444 | Nonsense | 85 | 1026 | 1 | 5 |
Genomic Location (Zv9):
Chromosome 14 (position 45365183)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 14 | 42632929 |
| GRCz11 | 14 | 43000183 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACGGAGTGCTTTTCGTGAACGAGAAAATCGACCGGGAGCGCATCTGCAAG[C/T]AGAGCGCCAGCTGTTTGCTTCACCTGGAGGTGTTCCTGGAGAACCCGCTC
Long Flanking Sequence:
TCACTTGTGCCAGAAATTCGCTGCGAGTCTAAAGCTTGTTCGTGGAGGGAATCGCCTTGGGAAATCGGTCCTGTGTAAAGCAGCACGCAGACAGCATGGTTTTTGGCTGACAGCCCCGTTTAAGGAAAAATATTGCCCTACAACCAAAGCCTTACGCACGTCTGCGCCTTACCTTGGAGAAGAGGGTGATGGTTTTGCTGCGTTCTCCGCGGAGATAAAATATTCCAAGTGTCCTTTCCGGAGTGGAGATGTTTGTGTTTTTGCTCCTGCTGTGTCTCGCGGATGGGGTAGTTTCGCAGATACGTTACTCTGTGCCCGAGGAAGCGGAGCATGGCACTTTCGTGGGGAATATCGCAGAGGATTTGGGACTGGACCTTACAAAACTTTCATCCCGCCGCTTTCAGGTGGTGCCCAGCTCGCGGACGCCGTACCTGGAAGTAAACTTGGAGAACGGAGTGCTTTTCGTGAACGAGAAAATCGACCGGGAGCGCATCTGCAAG[C/T]AGAGCGCCAGCTGTTTGCTTCACCTGGAGGTGTTCCTGGAGAACCCGCTCGAGCTGTTTCGCGTGGAGATCGAGGTGGTGGACATCAACGACAACCCGCCGAGCTTTCCAGAGACGGACTTCACCGTGGAAATATCCGAGAGCGCGACCCCGGGTACGCGTTTCCCTTTGGAGAGCGCGTTCGATCCGGATGTCGGTAGTAACGCATTGCGCACTTACGACATCACCACCAACAACTATTTCTACCTAGACGTGCAAACACAGACTGACGGCAACAAATTCGCAGAGCTGGTTTTGGAAAAGCCACTTGACCGGGAACAACAGGCGATGCACCGTTACGTGCTCACGGCCGTGGACGGTGGCCAGCCTCCCCGAACAGGTACAGCGCTGCTTGTGGTCAGGGTGCTCGACTCCAACGACAACGTCCCCGTGTTTGATCAGCCGGTGTACTCGGTCAACCTGGCAGAGAACGCGCCCGTGGGCACGCTCGTCATCCAGCTG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa1760
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000052444 | Nonsense | 630 | 1026 | 1 | 5 |
Genomic Location (Zv9):
Chromosome 14 (position 45363546)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 14 | 42631292 |
| GRCz11 | 14 | 42998546 |
KASP Assay ID:
554-1753.1 (used for ordering genotyping assays)
KASP Sequence:
TTGCGCACAGCCCGCCGGGTGTCAGTCAAACGTGACCCGCAGCAGCTGTA[C/A]GAGCTGCTGATTGAAGTGAGGGATCACGGGCAGCCTCCAATGTCGTGCAG
Long Flanking Sequence:
GTCAGTGCTGTCGATCCTGATGTCGGACAGAATGCTTATATAACTTACTCCATAGTGGAGTGTGAAATACAGGGTATGTCTGTGGTCACGTATGTGTCCATCAACTCAGAAAATGGGTATCTGTACGCCCTCAGGTCGTTTGATTACGAGCAACTTAAAGATTTCAGCTTCATGGTTCAAGCTAGAGACTCGGGCAGCCCCGAACTGTGGTCCAACGCCACGGTAAACGTCATTATAGTGGATCAGAACGATAACGCGCCGTCTGTGATTGCGCCTGTTGGAAAAAATGGCACTGCGCGGGAGCCTTTGCCGCGCTCTGCTGAACCAGGCTACTTGGTTACCCGCATTGTCGCCATGGATGCGGATGATGGAGAGAACGCGCGCTTGTCATACAGCATACAGAGAGGCAACGAGAATGGGATGTTCAGAATGGACTGGCGCACAGGGGAGTTGCGCACAGCCCGCCGGGTGTCAGTCAAACGTGACCCGCAGCAGCTGTA[C/A]GAGCTGCTGATTGAAGTGAGGGATCACGGGCAGCCTCCAATGTCGTGCAGCGCGGTGGTGCAGGTGACACTCGTGGACAGTCTCGTAGAGGGCCACAGTGGAGAGCGCGGCACGGCCAAGGCCAAAGACGCGTCTCTGGATCTGACGCTCATCCTCATCATCGCGCTCGGCTCTGTTTCCTTCATCTTCCTCCTGGCTATGATCGTGCTGGCCGTGCGCTGTCAGAAGGACAAAAAGCTCAACATCTACAGCACCTGCCTGGCGAGCGACTGCTGCTGCCTGGTGGGCTGCGGATCGTGTGGGTCAGGCGGTTGCTGTGGTCGCCAGGCACGGGCCGCACGGAAAAAGAAGAAGCTGAGCAAATCTGACATAATGCTGGTTCAGAGCACCAACACGGCCAACGTGAGCGTGGCGAGCGCCGCGCAGGTGCCCGTGGAGGAGTCAGGGAGCTTCGGCTCGCTCCATCAAAGTCAAAACTACTGTTATCAGGTCTGTCTAAC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa42436
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000052444 | Essential Splice Site | 1020 | 1026 | 4 | 5 |
| ENSDART00000052444 | Essential Splice Site | 1020 | 1026 | 4 | 5 |
Genomic Location (Zv9):
Chromosome 14 (position 45223697)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 14 | 42618331 |
| GRCz11 | 14 | 42985585 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CGATGCACTTCTGTGTAACTCTCGCATGCCTTACAAAGCCGCCTGTCTGT[G/A]TGAGTATCTCGAAGAGAGAGCGCTATCCTCTCTCTTGATCTGACCCCAAA
Long Flanking Sequence:
ATGCTTTGGTTTAGTGTATTTATTTATGTTCGTTCGTCTTGTTTTTAAAGCTCTTACAAGCTTCCAGTGCAATTGGGAGCGTGTTCTCATTCTCATCCACCCACATGGACAATTAAACACAAGCTAACCCGTCTCTGTGTTCTCTCTCATAGGAGCAGACCTGTTCTCCAACTGCACAGAGGAGTGCAAAGCCCTCGGCCACTCAGATCGCTGCTGGATGCCAAGTTTTGTGCCCACCGAGGCACGACAGGGCGCCGATTACCGCAGCAACCTGCACGTGCCGGGCATGGACTCTGTGCCCGATTCTGAGGTATTTGAGGGCGAGATGTTGGCGGGGGATCAGTCATTCTCAACCTTTGGCAAAGAGACGCCACACCACCCCAACCAGATGCACCAACATCAACACCATCAACACAACCTCAATGCTTCCACGCTAGAGAGGAAAGAGTTCGATGCACTTCTGTGTAACTCTCGCATGCCTTACAAAGCCGCCTGTCTGT[G/T]TGAGTATCTCGAAGAGAGAGCGCTATCCTCTCTCTTGATCTGACCCCAAAAAAACTTTCTAAATTAAAGGCCTCTATAGCGTGAAGTGCTGCTGAATTCTCCTCTAAAGCCCTCACACTTGCGCTCTCCTTCACCCATCTGCATCTGTTCATTCTTCATCTGCTGCTGCCTGACGTACACGCTTAAAAATAAAGGATCCAAAAAAACAAAAAGTCTTTTTAGCCCCCCAAAGGGTTTCTTTTTTTATTCCTTAATTCTTCAGAAAGCGTCTACTGGCGCTTTAAAGGTCTCTGGAGGACTGCTGGTTTTAAACGGACCAATCATTATGCTGATTTTAGGGACCTTTTAATGTAGGATCCAAGAACAGGTTTAATCTTCAAAGAACTGAAAAGTAAGAAGTGAAGAAGAAAGATCCTTTATTTTTAAGAGTTTATTATTTGCATTTCTTCATCCATTTTCTTCATTTATCTTCAAATAACGCTATCAGGGTTGTGAGAAAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa42437
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000052444 | Essential Splice Site | 1020 | 1026 | 4 | 5 |
| ENSDART00000052444 | Essential Splice Site | 1020 | 1026 | 4 | 5 |
Genomic Location (Zv9):
Chromosome 14 (position 45223697)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 14 | 42618331 |
| GRCz11 | 14 | 42985585 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CGATGCACTTCTGTGTAACTCTCGCATGCCTTACAAAGCCGCCTGTCTGT[G/A]TGAGTATCTCGAAGAGAGAGCGCTATCCTCTCTCTTGATCTGACCCCAAA
Long Flanking Sequence:
ATGCTTTGGTTTAGTGTATTTATTTATGTTCGTTCGTCTTGTTTTTAAAGCTCTTACAAGCTTCCAGTGCAATTGGGAGCGTGTTCTCATTCTCATCCACCCACATGGACAATTAAACACAAGCTAACCCGTCTCTGTGTTCTCTCTCATAGGAGCAGACCTGTTCTCCAACTGCACAGAGGAGTGCAAAGCCCTCGGCCACTCAGATCGCTGCTGGATGCCAAGTTTTGTGCCCACCGAGGCACGACAGGGCGCCGATTACCGCAGCAACCTGCACGTGCCGGGCATGGACTCTGTGCCCGATTCTGAGGTATTTGAGGGCGAGATGTTGGCGGGGGATCAGTCATTCTCAACCTTTGGCAAAGAGACGCCACACCACCCCAACCAGATGCACCAACATCAACACCATCAACACAACCTCAATGCTTCCACGCTAGAGAGGAAAGAGTTCGATGCACTTCTGTGTAACTCTCGCATGCCTTACAAAGCCGCCTGTCTGT[G/A]TGAGTATCTCGAAGAGAGAGCGCTATCCTCTCTCTTGATCTGACCCCAAAAAAACTTTCTAAATTAAAGGCCTCTATAGCGTGAAGTGCTGCTGAATTCTCCTCTAAAGCCCTCACACTTGCGCTCTCCTTCACCCATCTGCATCTGTTCATTCTTCATCTGCTGCTGCCTGACGTACACGCTTAAAAATAAAGGATCCAAAAAAACAAAAAGTCTTTTTAGCCCCCCAAAGGGTTTCTTTTTTTATTCCTTAATTCTTCAGAAAGCGTCTACTGGCGCTTTAAAGGTCTCTGGAGGACTGCTGGTTTTAAACGGACCAATCATTATGCTGATTTTAGGGACCTTTTAATGTAGGATCCAAGAACAGGTTTAATCTTCAAAGAACTGAAAAGTAAGAAGTGAAGAAGAAAGATCCTTTATTTTTAAGAGTTTATTATTTGCATTTCTTCATCCATTTTCTTCATTTATCTTCAAATAACGCTATCAGGGTTGTGAGAAAA
Associated Phenotype:
Not determined