ZMP
pcgf1
Ensembl ID:
ZFIN ID:
Description:
Polycomb group RING finger protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q7ZYZ7]
Human Orthologue:
PCGF1
Human Description:
polycomb group ring finger 1 [Source:HGNC Symbol;Acc:17615]
Mouse Orthologue:
Pcgf1
Mouse Description:
polycomb group ring finger 1 Gene [Source:MGI Symbol;Acc:MGI:1917087]
Alleles
There are 3 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa22415 | Nonsense | Available for shipment | Available now |
| sa30672 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
| sa18212 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa22415
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000001424 | Nonsense | 107 | 261 | 3 | 9 |
| ENSDART00000129432 | Nonsense | 141 | 295 | 3 | 9 |
Genomic Location (Zv9):
Chromosome 14 (position 5407347)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 14 | 5094344 |
| GRCz11 | 14 | 5401178 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CAGCCGCTGCTGAATCTGAAGTTGGACAGAGTCATGCAGGACATCGTCTA[T/A]AAATTGGTTCCAGGTCTACAGGAGAGTGAGTACAGAGAAGTGGAAGGTTT
Long Flanking Sequence:
GTACCAAATACCGTTTGGTACCGAACTCGACACTTTTGACAAACCTACTGTAGATACGCATTCATGAACTTCTGCTAATGTTACTGAATGTCCACTGGCATAATAATCTCTGACCTGTTTTTTTTCCTGTATTGTACCACAGGAAGAAGTTAAAATTAAGATAAAGGACCTAAATGAACACATTGTGTGCTACCTCTGTGCAGGATACTTTATCGATGCAACCACCATCACAGAATGTCTCCATACATGTAAGTATCTATCTTTCTTTTAGTTACTCTCTATTAGATTTAACAGCCTACATGCTAGAGAAACTCTCAACTACTTTATTTTTGTTGAATATCTGCTAATTTTCTTTCCCACCATCTCTTCCCAGTCTGCAAGAGTTGCATTGTGAAGTATCTCCAGACCAGCAAGTATTGTCCAATGTGTAACATCAAAATCCATGAAACACAGCCGCTGCTGAATCTGAAGTTGGACAGAGTCATGCAGGACATCGTCTA[T/A]AAATTGGTTCCAGGTCTACAGGAGAGTGAGTACAGAGAAGTGGAAGGTTTAAACGTAAAAGAGTTTAAACGAAGTTTAATCCTGCGTCTTGAACTTTACAGGTGAAGACAAACGAATAAAAGAGTTCTATCAGTCACGAGGTCTCGAACGCATCATACAGCCATCTGGAGAAGGTCAGTGACAGCATATACTGATGAATTATTATTATATTATGATATTAGTTATATTTTAATTTAAGATTTTTTTTTTTTTTTCATTTTTTTGTAAAAAATTGTATGTTTTATTTTTTAAGAATCAGTTCCAGATAATACAGGATTACCGTACACAAGCTTTGACCACTCAAAAGCCCACTTCTACAGATATGATGAGCAGGTCTCTTTATGTCTGGAAAGACAAAGGTAAGCCGACAACAATTTATTTTTACATCACTGTTCAAAACTCTGAGGTTGGTTGCTTAGCTTTTAGATTTTTATTTTCATGATTATTTTCATGTAAACAAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa30672
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000001424 | Essential Splice Site | 175 | 261 | 5 | 9 |
| ENSDART00000129432 | Essential Splice Site | 209 | 295 | 5 | 9 |
Genomic Location (Zv9):
Chromosome 14 (position 5406947)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 14 | 5093944 |
| GRCz11 | 14 | 5400778 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACTTCTACAGATATGATGAGCAGGTCTCTTTATGTCTGGAAAGACAAAGG[T/C]AAGCCGACAACAATTTATTTTTACATCACTGTTCAAAACTCTGAGGTTGG
Long Flanking Sequence:
TCCAGACCAGCAAGTATTGTCCAATGTGTAACATCAAAATCCATGAAACACAGCCGCTGCTGAATCTGAAGTTGGACAGAGTCATGCAGGACATCGTCTATAAATTGGTTCCAGGTCTACAGGAGAGTGAGTACAGAGAAGTGGAAGGTTTAAACGTAAAAGAGTTTAAACGAAGTTTAATCCTGCGTCTTGAACTTTACAGGTGAAGACAAACGAATAAAAGAGTTCTATCAGTCACGAGGTCTCGAACGCATCATACAGCCATCTGGAGAAGGTCAGTGACAGCATATACTGATGAATTATTATTATATTATGATATTAGTTATATTTTAATTTAAGATTTTTTTTTTTTTTTCATTTTTTTGTAAAAAATTGTATGTTTTATTTTTTAAGAATCAGTTCCAGATAATACAGGATTACCGTACACAAGCTTTGACCACTCAAAAGCCCACTTCTACAGATATGATGAGCAGGTCTCTTTATGTCTGGAAAGACAAAGG[T/C]AAGCCGACAACAATTTATTTTTACATCACTGTTCAAAACTCTGAGGTTGGTTGCTTAGCTTTTAGATTTTTATTTTCATGATTATTTTCATGTAAACAAAAAAGTAACACTTGTAAATGCTGTTCTTTGAAGTTAATATTCAAAACAAGCCTGGAAAAACCCCCCACAAAAAGTAGTACAACTGTTTTCAAAATACATTATAATAATAATAATAAGAATGTTTTTTGAGCACCATATCAACATAATAGACTAATTTCTTAGAATGTAACGCTATATGAACTTGCAAAAACATAAATATATAATAATAAATTATAATAAATTAATAATAATTCATATATATATATATATATATATATATATATATATATATATATATATATATATATATTAAGGCTGCAGAAAAATCTAGTGTTGCAATGTTTTGCTGTTCTGCAATATATTGGGATATGAATACAATTTCATAATGTAAAATAATGTATGATTTTAGATTGCATAATATT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa18212
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000001424 | Nonsense | 195 | 261 | 7 | 9 |
| ENSDART00000129432 | Nonsense | 229 | 295 | 7 | 9 |
Genomic Location (Zv9):
Chromosome 14 (position 5405376)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 14 | 5092373 |
| GRCz11 | 14 | 5399207 |
KASP Assay ID:
2260-7221.1 (used for ordering genotyping assays)
KASP Sequence:
GACGATGCATTTTCATGTTTTCYATTTCCGCAGCAGAAATTTGTACGTTG[T/A]TCAGTCAGGGCGGAAGTACGGCATTTGAGGAARGTGTTATGTCATCGACT
Long Flanking Sequence:
AATTGTTAATTTAATCTGACAATTTGCTTTTGCGTCGGAAGTAGCTGTCCTTTTCTGATGATGTCAGTTTGATGACTTCATCCACAATATTCTTAGCCACGCCCCTCTTATCCTTAGTTTATTTTGAGAGAGTGATGCGCATAAAGAAAGCCCCGCCCCCTGCTCAATATTCTGTTTCTGTTGAACATACTGAAATAAAAGTCTCAGCAACTTCCAGTTAACGTAGACTTTATGAATCATGTTTCAGAAGTATATATTTTACATTTTTATTTATTTATTTATTTTTCTGTGGTCAAAAGCTTCCTCTTATCATTTCGTCTTGTTTTTACAGTTCGTCGTTTTCTGGCAAAGACAAAAATAAATTAACTCTACAGGTAAGACAACAGCCTAAACAGGAATATGGACGTACATTCATTTACTCTTAACTTTAGCTGTTTTACTATTATAAGTGACGATGCATTTTCATGTTTTCTATTTCCGCAGCAGAAATTTGTACGTTG[T/A]TCAGTCAGGGCGGAAGTACGGCATTTGAGGAAAGTGTTATGTCATCGACTCAACGTGGAAAAGCATCAGGTCTGACACTATTTTTCATCTTTTTTTCCCCCATTGCTTTTATATTTTGCACCAGAATGAAACGGATTGTTACCTTCAGTTGCCTTTTTTTGTCCCACATTTAAATGCTATCAAAAACCTACTTTTAAAAAATAAAGAATGACTGTAATTTCAAAAGCAACTCATGAACACTGTTTTAAGTGTAATGCCAACCCTTTCCCCCATGTACATTAAATGTGCTTGTTGTTGTATTTATTTTTTGTTCTAAAATACAAATTACGATTGTTCTATCGTGATTTACAGAGGACACACTAAAATGTCAGTGTAACAATAGTTTGCATAACTAAGTAATATTGTCAGCAGTGTTGGGGAAAGTTACTTTTGAAAGTACTGCATTACAATATTGAGTTACTCCCCTAAAGAGTAACCAGCTGCGTTACTTTTTTTGTAAG
Associated Phenotype:
Not determined