ZMP

smarca2

Ensembl ID:

ENSDARG00000008904

ZFIN ID:

ZDB-GENE-030131-5964

Description:

probable global transcription activator SNF2L2 isoform 2 [Source:RefSeq peptide;Acc:NP_001038240]

Human Orthologue:

SMARCA2

Human Description:

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 [S

Mouse Orthologue:

Smarca2

Mouse Description:

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 Ge

Alleles

There is 1 allele of this gene:

Allele Name	Consequence	Status	Availability
sa20515	Nonsense	Available for shipment	Available now

Mutation Details

Allele Name:

sa20515

Status:

Available for shipment
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Availability:

Order Allele From ZIRC

Mutation:

A > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000041412	Nonsense	1053	1568	24	34
ENSDART00000113738	None	None	258	None	5
ENSDART00000136002	None	None	170	None	4

Genomic Location (Zv9):

Chromosome 5 (position 46849148)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	5	44630413
GRCz11	5	45230566

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

GCTTTTTTTTTTCTTGTCCACCTAGCCCTGACCTGTACCGAGCCTCTGGC[A/T]AGTTTGAGTTACTGGACCGCATCCTGCCCAAACTGAAGGCCACCAATCAC

Long Flanking Sequence:

TTTTTCTGGGGCATTAGGACTCACACAGACCACAAGTTACCAGAAGGCAAAGTATCATAGACGCTGCGGTGAACACTGTGGTTTCTGTGGTTACTGTCATTCCTCTGCAGACAAAAAAATTGCAGTTATCGCCACAGCCATAAACTGTATGTAAGCCTTGTTAGTTGTTCAACGAGCAGTGCCACTGTAATAAACAGTCAGTATTTTTTTCCTACTTGTATAGCATGAGCTACACTAAAAGCATCTTTTTTGTATCTATTCAGGAATCCTTTGCTGAACATTTGGGATTTCCAAATGGCATTATCAGCGGGTGAGTATACATCAAATCGAGCGTTACATAACCTTAAGAGTTACCATGAAGTGTTCATTCATGTCAATTATGGATCACTAAACTGACCGCGGGCTCTGGACAGTGGAGGTACACCATCATAGATTTGACATTAGCGTTGTGCTTTTTTTTTTCTTGTCCACCTAGCCCTGACCTGTACCGAGCCTCTGGC[A/T]AGTTTGAGTTACTGGACCGCATCCTGCCCAAACTGAAGGCCACCAATCACAGAGTGCTTTTGTTCTGCCAGATGACCTCCCTCATGACCATCCTGGAGGATTACTTTGGCTACCGTAACTTCCTTTATCTGCGTCTGGACGGTCAGTAATCAGCGCAGTCCTTCTTTAATGTTTTCCTGTCCTTTAGGGCCTTATTTCTTGGGGGTTTCCAATTGGAAATTTTAATAAGTGTGATCACACAAACATGCTGCCCTTTCTCTTTCATTAACACTCCTTTGCTGCTGGTTTTGTCCTCCAGGAACTACAAAGTCAGAGGATCGTGCGATGCTTTTGAAGAAATTCAATGAGGAAGGCTCCCAGTATTTTATCTTCCTGCTGAGCACCAGGGCGGGAGGTTTGGGGCTGAACTTGCAAGCTGCAGACACTGTTGTGATCTTTGACAGCGACTGGAACCCCCACCAGGTTTGTGTGATTCACTGCTGTGATTAGAGAGGAACTAG

Associated Phenotype:

Not determined