ZMP

LOC100333837

Ensembl ID:

ENSDARG00000025320

Human Orthologue:

COL21A1

Human Description:

collagen, type XXI, alpha 1 [Source:HGNC Symbol;Acc:17025]

Alleles

There are 3 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa22199	Nonsense	Available for shipment	Available now
sa14636	Nonsense	Available for shipment	Available now

Mutation Details

Allele Name:

sa22199

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC

Mutation:

A > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000029343	Nonsense	125	664	2	18

Genomic Location (Zv9):

Chromosome 13 (position 1677238)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	13	1670748
GRCz11	13	1802039

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

TGGAGTCTATAGAATACATGGGTGGGAACACCAACACTGGACGGGCCATC[A/T]AGTTCGCTAATGACAAACTCTTTGCCCTGTCTGAGCGAGGTCCGAATGGC

Long Flanking Sequence:

CCCCGGGCCATTGGGCAGTCCTTATTGTTGAGCCCTGCAAACCTTGATTTCCTTGCTCAGGTGTGTTTGATTAGCTGGAGCTAATCTTTGCAAGACACCGGACCTCCAGAAACAGGTTTGCTGACCTCTGCTGTAGTTAATAGAATATCCCAAATGTGTCCTATAAAGCGAGCAGCTGAAATGGTCAATAACACACTACAAACTCTCATCTTCATTCCTCAATTTCAGGTTGTAGGACAGCGCCAAGTGACTTAGTATTCATACTCGATGGATCATGGAGTGTGGATGATATAAACTTCGAGATTGTCAAAAAGTGGTTGGTGAATATCACCATGAGCTTCAATATCGGTCAAAAGTTCACCCAGGTTGGGGTGGTGCAATACAGCGACGACCCCTTCTTGCATATACCCCTGGGTAAACACTTCTCGAGCAGTGACCTCATCAAGGCCATGGAGTCTATAGAATACATGGGTGGGAACACCAACACTGGACGGGCCATC[A/T]AGTTCGCTAATGACAAACTCTTTGCCCTGTCTGAGCGAGGTCCGAATGGCATTGCGAAAATCGCTGTGGTTCTGACGGACGGGAAGTCACAAGATGAAGTGCTGGCAGCTGCGGAAGCTGCGAGGAAAAAGGGGATAATTCTCTTTGCAATTGGAGTCGGGTCTGAGACCGAAGAGGCACAGCTCAGGGCTATCGCCAACAAGCCATCCTCAACCTATGTTTTTTCTGTGAAAGACTATAAAGCGATCGCAAAGATCCGTGAAGTTATTAGGCAGAAGTTGTGCGAAGGTAAGCCTCAATGTAATGTCTCCAAGCTTTCATATACCAGTGGCTAGATCAGGGGTGGCCAACCCTGTTCCTGGAGAGCCACCTTCCTGCCGATTTCAGATGCTACCATATCAAACACACCTGAACCGATTAATTAGGACCTGAACACCACGTGATAATTACAGGCAGGTGTGTTTGATATGGGTAGCAACTGAAATCTGCAGGAAAGTGGG

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa14636

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC
Order Allele From EZRC

Mutation:

C > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000029343	Nonsense	137	664	2	18

Genomic Location (Zv9):

Chromosome 13 (position 1677274)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	13	1670784
GRCz11	13	1802075

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

CTGGACGGGCCATCAAGTTCGCTAATGACAAACTCTTTGCCCTGTCTGAG[C/T]GAGGTCCGAATGGCATTGCGAAAATCGCTGTGGTTCTGACGGACGGGAAG

Long Flanking Sequence:

GCAAACCTTGATTTCCTTGCTCAGGTGTGTTTGATTAGCTGGAGCTAATCTTTGCAAGACACCGGACCTCCAGAAACAGGTTTGCTGACCTCTGCTGTAGTTAATAGAATATCCCAAATGTGTCCTATAAAGCGAGCAGCTGAAATGGTCAATAACACACTACAAACTCTCATCTTCATTCCTCAATTTCAGGTTGTAGGACAGCGCCAAGTGACTTAGTATTCATACTCGATGGATCATGGAGTGTGGATGATATAAACTTCGAGATTGTCAAAAAGTGGTTGGTGAATATCACCATGAGCTTCAATATCGGTCAAAAGTTCACCCAGGTTGGGGTGGTGCAATACAGCGACGACCCCTTCTTGCATATACCCCTGGGTAAACACTTCTCGAGCAGTGACCTCATCAAGGCCATGGAGTCTATAGAATACATGGGTGGGAACACCAACACTGGACGGGCCATCAAGTTCGCTAATGACAAACTCTTTGCCCTGTCTGAG[C/T]GAGGTCCGAATGGCATTGCGAAAATCGCTGTGGTTCTGACGGACGGGAAGTCACAAGATGAAGTGCTGGCAGCTGCGGAAGCTGCGAGGAAAAAGGGGATAATTCTCTTTGCAATTGGAGTCGGGTCTGAGACCGAAGAGGCACAGCTCAGGGCTATCGCCAACAAGCCATCCTCAACCTATGTTTTTTCTGTGAAAGACTATAAAGCGATCGCAAAGATCCGTGAAGTTATTAGGCAGAAGTTGTGCGAAGGTAAGCCTCAATGTAATGTCTCCAAGCTTTCATATACCAGTGGCTAGATCAGGGGTGGCCAACCCTGTTCCTGGAGAGCCACCTTCCTGCCGATTTCAGATGCTACCATATCAAACACACCTGAACCGATTAATTAGGACCTGAACACCACGTGATAATTACAGGCAGGTGTGTTTGATATGGGTAGCAACTGAAATCTGCAGGAAAGTGGGTCTCCAGGAACAGGATTGGCCACCCCTGNNNNNNNN

Associated Phenotype:

Not determined