ZMP
zgc:111868
Ensembl ID:
ZFIN ID:
Description:
hypothetical protein LOC556628 [Source:RefSeq peptide;Acc:NP_001030142]
Human Orthologue:
RGAG1
Human Description:
retrotransposon gag domain containing 1 [Source:HGNC Symbol;Acc:29245]
Mouse Orthologue:
Rgag1
Mouse Description:
retrotransposon gag domain containing 1 Gene [Source:MGI Symbol;Acc:MGI:2685231]
Alleles
There are 3 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa15734 | Nonsense | Available for shipment | Available now |
| sa22169 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa15734
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000074812 | None | None | 400 | None | 3 |
| ENSDART00000124492 | Nonsense | 397 | 840 | 4 | 4 |
Genomic Location (Zv9):
Chromosome 12 (position 44353470)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 12 | 42210319 |
| GRCz11 | 12 | 42365608 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TCAGGCCATCCCAAGTGAATCTCAGTCTCCRTTGCAGCCTTCCWCTAGCT[T/A]GTYATCTGGTTTTCAGTCTTCCAGTACTGGGTCTCAGAGTGTCACATCTC
Long Flanking Sequence:
TTCCCAGTCTCAAGGTACATCTGTCCATGTTGCTGCATCACCCTTAAGTGTAAGCCAGTCTACGAGTGGTCTGGGGTCTACAATCCAGTATACATCAAGCTCCCAGGGCTTGGTTGACCGTCTGCTACCAGCTTCTAGTCAATCTGTGCCTGTACAAGGAATTGCCTACAGCTCTGTTGCCCAACCCCAGAGTACCACAGGTCAGAGTGCTCAGACCTCCTCTGCAAAACTGATTTTGTCTAAAGCAGTTCAGAGCCTCTCGCCTCTCTCTATAAATCAGCTTTCAAGGCCTCAGCCCTTTGTCACTGCAGTGTCAAAAGAACTTCAGACATCTGGAACCACACAGGGTAGCTTCCTAACACCCAGTGTTGTTGGTAGCATTTCTACCCAGTCTCAAGGTACCCCTGGCCTGTATGTCCCTACTGCTCTAGAAGAAGTGCTGGTGTATAGTCAGGCCATCCCAAGTGAATCTCAGTCTCCGTTGCAGCCTTCCACTAGCT[T/A]GTTATCTGGTTTTCAGTCTTCCAGTACTGGGTCTCAGAGTGTCACATCTCAAGGCTCCAAGCCTTCCACTAGCTTCTCTACCCTTGCATCACTTGGTGGCTTGACTAGTCAGTCTCAAGGTACATCAAATAAGTATACCCCTGGATCCTCTGTTTATGTCAAGCTTGCTGCTTCACCCTTGAGCCAGTCTACCAGTGGTCTGGAATCTTCAAGCCAGTATATATCAAGCTCTCAGGGCTGGGTTGACAGTCAGCTAGCAGCTTCCAGCCAATCAGCGCCTGTACAAGGAATTGCCTACAGCTCTGTTGCCCTACCCCAGAGTACAAGTCAGAATGCTCTAACCTCTTCTAAAGTGCTTCTGTCTAGTAAGGCAATTAAGGGTGTCTCACCCCTCTATGTTAATCAACCTTCAAGGCCTCAGCCCTTTGTCACCGTGTCAAAAGGGCTTCAGACATCAGGCACCATACAGAGTGGCTCTCTGACTCTTCCTAGTGGGTTCT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa22169
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000074812 | Nonsense | 288 | 400 | 2 | 3 |
| ENSDART00000124492 | Nonsense | 589 | 840 | 4 | 4 |
Genomic Location (Zv9):
Chromosome 12 (position 44354047)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 12 | 42209742 |
| GRCz11 | 12 | 42365031 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GGTACCTCTGGTGTATATACCCCAACTGCTGTTAAAGAAGTTCTCATGTA[C/A]AGTCAGGCTGCCCCAAGTGAATCTTTGTCCATACTGCAGCCTTCCACTAG
Long Flanking Sequence:
TCTACCCTTGCATCACTTGGTGGCTTGACTAGTCAGTCTCAAGGTACATCAAATAAGTATACCCCTGGATCCTCTGTTTATGTCAAGCTTGCTGCTTCACCCTTGAGCCAGTCTACCAGTGGTCTGGAATCTTCAAGCCAGTATATATCAAGCTCTCAGGGCTGGGTTGACAGTCAGCTAGCAGCTTCCAGCCAATCAGCGCCTGTACAAGGAATTGCCTACAGCTCTGTTGCCCTACCCCAGAGTACAAGTCAGAATGCTCTAACCTCTTCTAAAGTGCTTCTGTCTAGTAAGGCAATTAAGGGTGTCTCACCCCTCTATGTTAATCAACCTTCAAGGCCTCAGCCCTTTGTCACCGTGTCAAAAGGGCTTCAGACATCAGGCACCATACAGAGTGGCTCTCTGACTCTTCCTAGTGGGTTCTCTGGTAGCACCTCTCCCCAGCCTCAAGGTACCTCTGGTGTATATACCCCAACTGCTGTTAAAGAAGTTCTCATGTA[C/A]AGTCAGGCTGCCCCAAGTGAATCTTTGTCCATACTGCAGCCTTCCACTAGCTTGCACAGTACTGTGCTACAGGGCAGCACAGTGTCTCAAGGCTTTAAAACTCCCTCTACCGATGGCACCTTTATCAAGCTTCAGGAAACCTCTAGCCAATATGTCCCCACTGCTCTGGATGTGGAATTGCCCCTGAGACCGAGCCAAGGTTCAAAACAGGAATTCCTTATCAGTGGCCCAGCGACACAATGGCGACCTTCCTCCACTAGCTGGTCACCAGATTATGAGACTTCTCGTACTGTGGTATCCCAAGTTAACGCTGCATCTCCAAGCTTCAACTATGCCGGTAGGCTCTCTGGCCAGTTTGCCTCACCACAGGCAGGCATTGCATATAGTGGCTTGCCTAGCACAGCTGTATCCCAGAGTAGCTCCTCGGGTTCCAGTCAGTTTCCTGTCCTGCCTGCCCTAAGCTTGCCTCTTGTCCAGAGTACAACCTCTAGTTCTCATAA
Associated Phenotype:
Not determined