ZMP
pax8
Ensembl ID:
ZFIN ID:
Description:
Transcription factor [Source:UniProtKB/TrEMBL;Acc:O93372]
Human Orthologue:
PAX8
Human Description:
paired box 8 [Source:HGNC Symbol;Acc:8622]
Mouse Orthologue:
Pax8
Mouse Description:
paired box gene 8 Gene [Source:MGI Symbol;Acc:MGI:97492]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa2216 | Nonsense | F2 line generated | Not yet available |
| sa31494 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa2216
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > G
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000029014 | Nonsense | 46 | 429 | 2 | 10 |
Genomic Location (Zv9):
Chromosome 5 (position 75550765)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 5 | 71639432 |
| GRCz11 | 5 | 72412324 |
KASP Assay ID:
554-2744.1 (used for ordering genotyping assays)
KASP Sequence:
CTCCCCCAGTGACTGTACCGCTGTCCCTGTGTGTTCTCATTCAGGTACTA[T/G]GAGACGGGCAGCATCAAACCCGGCGTCATCGGCGGCTCCAAGCCCAAAGT
Long Flanking Sequence:
GGTCTGCGGCTCTGTGAAGTCGGCTCTTGTGTTCACATGTGTTTGTGTTTGTGTGTGTGTTCGCCCCCAGGTCATGGGGGTCTTAATCAACTAGGAGGCATGTTTGTGAACGGGCGGCCGCTTCCGGAGGTGATCCGGCAGAGGATTGTGGATATGGCACACCAGGGGGTTCGACCCTGCGACATCTCCAGACAACTGAGGGTCAGCCACGGCTGCGTCAGCAAGATCCTGGGCAGGTAAACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAGAGCTGTAATGATGTCTGTACTGTACAGAGCGTATACTCTCTCGTCTCCCTCTGACCCTCTCAGAAACACTCTGCACCTGCTTCACTCTGAGGGTGACTCATGGGGACGCTGACTCCCCCAGTGACTGTACCGCTGTCCCTGTGTGTTCTCATTCAGGTACTA[T/G]GAGACGGGCAGCATCAAACCCGGCGTCATCGGCGGCTCCAAGCCCAAAGTGGCCACTCCAAAAGTGGTGGAGAAGATCGCGGAGTACAAGCGGCAGAACCCCACCATGTTCGCCTGGGAGATCCGAGACCGGCTGCTGGCCGAGGGGGTGTGTGACGGAGACACGGTGCCCAGCGTCAGCTCCATCAACCGGTACACACACACACGCACGCACTCACTCACTCACTCACTCACTCACACAGACAGGGATACAGACTTACTCACACACATATGTACACAAACACACACACACACACACACACACACACTAACCCATGTCTCCCGTTGTCCCTCAGGATCATCCGCACTAAAGTGCAGCAGCCATTTAACCTCCCGCTGGACACTAAAGGCCTGAGCCCAGGACACACACTGAGTAAGTGCTGTGAACATGTGAGTTTACTGCGGTAATGATCAGTCTTATACTGTGCTGTGAATATGTGAGTTTAGCGCGGTAATGATCAG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa31494
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000029014 | Nonsense | 253 | 429 | 6 | 10 |
Genomic Location (Zv9):
Chromosome 5 (position 75549221)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 5 | 71637888 |
| GRCz11 | 5 | 72410780 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CGCTCATGAACCCCGGTCTGGACGAGGGAAAAGGAGCTTCATCCATCAGC[A/T]GAAACCTGGCGGCACATCAGGGCTACGCTGTGGTCACAGGTAAGAACTGC
Long Flanking Sequence:
GTCCCCTGATAAATTAAAGTATAATTAATATCTGAATTTACATGTTTGGTCAACTAACAGTTCAGATCTGCAGCTGAGAGTAAACAGAGCTGCTCAGTGCCTGAGTGTGTGTTGTGCAGGCAGTAATGGAGTGTGTGTTGTGCAGGCAGTAATCAAGTGTGTGTTGTGCAGGCAGTAATGGAGTGTGTGTTGTGCAGGTGACCAGGAGAGCTGCCGGCACAGTGTGGACTCTCAGGGCAGTGGCGGCGGAGCCCGGAAACAGCTGAGAACCGAACACTTTCCCTCCGCGGCGCTGGACTGCGGGTTCGAGAGACACTACAGCAGCGACAGCTTCAGCCAGAGCAAAGCAGAGCAGGTGCAGAACATCGCATGCACATAACCAGAACCATATCTATAACCACAACCCTGACCCCTATCTGACCCTGACCCAGCAGCAGCTGTACCCGCTCGCGCTCATGAACCCCGGTCTGGACGAGGGAAAAGGAGCTTCATCCATCAGC[A/T]GAAACCTGGCGGCACATCAGGGCTACGCTGTGGTCACAGGTAAGAACTGCAGTCCTCATGACACTGACATAACTCATCCTTCATTCTACAAGAGGAGCAGCTCAGTGTGCAGAAGTGTACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACTCAAGCTCCTCCTCCTCATCTGCATATGTGTTAATAGTGTCTCTGCTTCTTGTCACTCATTCTGTTGTACATCCATTAACATCCACACATGCATCTCTCCACCTGTCTGTCATCCCATTGCTCCGTCTCAGAAGCTCTACAGCCCCTCCCACTCTGTCTGAAACAGGAAGTTTCACCTGAGGTGAACAGCTTAAGCCCCTCCCCCCACATCATCTCCGGTTCAGCCTTCCTGGACCTGTCTGCCATTTCGTCTCCGTCATCTGCGCCCGTTGCTAGCAGCTGCGGCTCCGCTCATTTATC
Associated Phenotype:
Not determined