ZMP
bc2
Ensembl ID:
ZFIN ID:
Description:
Charged multivesicular body protein 2a [Source:UniProtKB/Swiss-Prot;Acc:Q7ZW25]
Human Orthologue:
CHMP2A
Human Description:
chromatin modifying protein 2A [Source:HGNC Symbol;Acc:30216]
Mouse Orthologue:
Chmp2a
Mouse Description:
chromatin modifying protein 2A Gene [Source:MGI Symbol;Acc:MGI:1916203]
Alleles
There are 3 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa22108 | Nonsense | Available for shipment | Available now |
sa8643 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa4469 | Essential Splice Site | F2 line generated | Not yet available |
Mutation Details
Allele Name:
sa22108
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000076103 | Nonsense | 38 | 220 | 2 | 6 |
The following transcripts of ENSDARG00000053979 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 12 (position 28600864)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 12 | 26938473 |
GRCz11 | 12 | 27029833 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CATTAAATAGAGCCATGCGGGATCTAGACAGAGAACGGCAGAGACTGGAG[C/T]AGCAGGAAAAGAAAATAATCGCAGACATAAAAAAAATGGCCAAACAAGGA
Long Flanking Sequence:
AGCCCCAGCTGAACCAGTAGGCATTTCTCTGTCGAGTTTCCATGTTCTCCCCTTGTTGGCGTGGGTTTCCTCCAAAACGCACTATGCACTATGGGTGAATTGATTAAACTAAGTTGGCCGTAGTGTTTGTGTGTGGATAAGAGTGTATAGGTGTTTCCCAGTACTTCGTTACTGCTGAAAGGGCATCCACTGTGTAAAACATATTCTGGATAAGTACTCTCCAATTGAGTAAATAATGTGAAATAATGCGACCCATGATGAAAAAAAGATACTAAGCCGAAGGAGCATAAATGAATGACTTAAGTGCCCTCTAATGCCATTTGGATGTTTAACAGATCATAGAAACACTTAAAATTGTCCTCCTAATTGCTCTCTATTTTGTTCGTCAGATGGAGTTCCTGTTTGGAAGGAGAAAGACTCCTGAGGAGATGCTCAGACAGAATCAAAGAGCATTAAATAGAGCCATGCGGGATCTAGACAGAGAACGGCAGAGACTGGAG[C/T]AGCAGGAAAAGAAAATAATCGCAGACATAAAAAAAATGGCCAAACAAGGACAGATGGTAATGAGGTGTCATTTGATATTTGGTTGACTTTTTTACATTCATTTACAAGCAATATTCTTTCTCCTGTAGGATGCTGTAAAGATCATGGCTAAGGATTTGGTTCGTACAAGACGATATGTTAAGAAGTTCATCATGATGAGAGCCAATATTCAAGCTGTCAGCCTTAAAATTCAAACCCTCAAATCAAACAACAGCATGGCGCAGGCCATGAAAGGAGTCACCAAAGCTATGGCCACCATGAACAGACAGGTACTGTACATCCGCTAAAAAGTCCTGCCAACAGATAGTTTGTTCTTACGCGTGCGTTGATATTTATTCCTTTTTTCTCTTAATACAGTTAAAGTTGCCACAGATCCAGAAGATCATGATGGAGTTTGAGCGCCAAAGTGAAATCATGGACATGAAGGAGGAGATGATGAATGATGCAATTGATGATGCGAT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa8643
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000076103 | Nonsense | 105 | 220 | 3 | 6 |
The following transcripts of ENSDARG00000053979 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 12 (position 28600591)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 12 | 26938200 |
GRCz11 | 12 | 27029560 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TTAAAATTCAAACCCTCAAATCAAACAACAGCATGGCGCAGGCCATGAAA[G/T]GAGTCACCAAAGCTATGGCCACCATGAACAGACAGGYACTGTACAKCCGC
Long Flanking Sequence:
AAGCCGAAGGAGCATAAATGAATGACTTAAGTGCCCTCTAATGCCATTTGGATGTTTAACAGATCATAGAAACACTTAAAATTGTCCTCCTAATTGCTCTCTATTTTGTTCGTCAGATGGAGTTCCTGTTTGGAAGGAGAAAGACTCCTGAGGAGATGCTCAGACAGAATCAAAGAGCATTAAATAGAGCCATGCGGGATCTAGACAGAGAACGGCAGAGACTGGAGCAGCAGGAAAAGAAAATAATCGCAGACATAAAAAAAATGGCCAAACAAGGACAGATGGTAATGAGGTGTCATTTGATATTTGGTTGACTTTTTTACATTCATTTACAAGCAATATTCTTTCTCCTGTAGGATGCTGTAAAGATCATGGCTAAGGATTTGGTTCGTACAAGACGATATGTTAAGAAGTTCATCATGATGAGAGCCAATATTCAAGCTGTCAGCCTTAAAATTCAAACCCTCAAATCAAACAACAGCATGGCGCAGGCCATGAAA[G/T]GAGTCACCAAAGCTATGGCCACCATGAACAGACAGGTACTGTACATCCGCTAAAAAGTCCTGCCAACAGATAGTTTGTTCTTACGCGTGCGTTGATATTTATTCCTTTTTTCTCTTAATACAGTTAAAGTTGCCACAGATCCAGAAGATCATGATGGAGTTTGAGCGCCAAAGTGAAATCATGGACATGAAGGAGGAGATGATGAATGATGCAATTGATGATGCGATGGGAGATGAAGATGATGAAGAGGAGAGGTGAGCATGAATAAATGTACATTTTTATGAATATTTGCTAATTGACACCAACACTTTTTGCATTATTCTTGTAATGTAGTAAAATCAATACTTGAAATCAAGTAAAATATTATTTAATTAAAACCCGTGTCTGAATATACAGTTGAAGTCAGAATTATTAGCCCCCTGTATATTTTTTCTCTCCCAATTTTTGTTTAACGGAAAGGTTTGTGTAATAGTTTTAATAACTGATTTCTTATTTTTCTA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa4469
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000076103 | Essential Splice Site | 116 | 220 | None | 6 |
The following transcripts of ENSDARG00000053979 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 12 (position 28600554)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 12 | 26938163 |
GRCz11 | 12 | 27029523 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GCAGGCCATGAAAGGAGTCACCAAAGCTATGGCCACCATGAACAGACAGG[T/C]ACTGTACAKCCGCTAAAAAGTCCTGCCAACAGAKAGTTTGTTCTTACGCN
Long Flanking Sequence:
CTAATGCCATTTGGATGTTTAACAGATCATAGAAACACTTAAAATTGTCCTCCTAATTGCTCTCTATTTTGTTCGTCAGATGGAGTTCCTGTTTGGAAGGAGAAAGACTCCTGAGGAGATGCTCAGACAGAATCAAAGAGCATTAAATAGAGCCATGCGGGATCTAGACAGAGAACGGCAGAGACTGGAGCAGCAGGAAAAGAAAATAATCGCAGACATAAAAAAAATGGCCAAACAAGGACAGATGGTAATGAGGTGTCATTTGATATTTGGTTGACTTTTTTACATTCATTTACAAGCAATATTCTTTCTCCTGTAGGATGCTGTAAAGATCATGGCTAAGGATTTGGTTCGTACAAGACGATATGTTAAGAAGTTCATCATGATGAGAGCCAATATTCAAGCTGTCAGCCTTAAAATTCAAACCCTCAAATCAAACAACAGCATGGCGCAGGCCATGAAAGGAGTCACCAAAGCTATGGCCACCATGAACAGACAGG[T/C]ACTGTACATCCGCTAAAAAGTCCTGCCAACAGATAGTTTGTTCTTACGCGTGCGTTGATATTTATTCCTTTTTTCTCTTAATACAGTTAAAGTTGCCACAGATCCAGAAGATCATGATGGAGTTTGAGCGCCAAAGTGAAATCATGGACATGAAGGAGGAGATGATGAATGATGCAATTGATGATGCGATGGGAGATGAAGATGATGAAGAGGAGAGGTGAGCATGAATAAATGTACATTTTTATGAATATTTGCTAATTGACACCAACACTTTTTGCATTATTCTTGTAATGTAGTAAAATCAATACTTGAAATCAAGTAAAATATTATTTAATTAAAACCCGTGTCTGAATATACAGTTGAAGTCAGAATTATTAGCCCCCTGTATATTTTTTCTCTCCCAATTTTTGTTTAACGGAAAGGTTTGTGTAATAGTTTTAATAACTGATTTCTTATTTTTCTAGTTTTAATAAAACATTTATTTTATCTTTGCCATGATG
Associated Phenotype:
Not determined