Busch Lab

ZMP

si:ch211-51n14.2

Ensembl ID:
ENSDARG00000043816
ZFIN ID:
ZDB-GENE-041014-161
Description:
hypothetical protein LOC799868 [Source:RefSeq peptide;Acc:NP_001076403]
Human Orthologue:
ST6GALNAC1
Human Description:
ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltran
Mouse Orthologues:
Gm11735, St6galnac1
Mouse Descriptions:
ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltran
predicted gene 11735 Gene [Source:MGI Symbol;Acc:MGI:3713525]

Alleles

There are 5 alleles of this gene:

Allele Name Consequence Status Availability
sa14861 Nonsense Available for shipment Available now
sa22086 Essential Splice Site Available for shipment Available now

Mutation Details

Allele Name:
sa14861
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000064335 Nonsense 108 427 2 9
ENSDART00000112847 Nonsense 108 270 2 10

The following transcripts of ENSDARG00000043816 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 12 (position 22044532)
Other Location(s):
Assembly Chromosome Position
GRCz10 12 20570113
GRCz11 12 20691987
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ACAAACACAAATTCACTTCCTTGCCTCACTGGAAATTTGATGATCTGTAT[C/T]GATTGGACCCACATTTTAAACMGAGTGTAAGTACAGTCTACAATAACTAT
Long Flanking Sequence:
GAGGGGGAGCAGCGTAATGGTTCAAAAACGTCACCTAAAAGAGCTCTCTTGAGTCCTAATCAGTTTGTGGACGCGCAGGTGCGCGTGTGCGTTGCCAGATCATGTTTCTCCTGAGGATTTTCTTAGTCACAACTTTCATAGCTTCTCTTCCTTTGTTTATTTTTGTCACATTTTATAATGGAACTAGCACTTTACAGATAAAATGGAGGTAAGAAACTTTACCAAATCGAATCTGCATTAACGTGAAGTTACAGGCTAACAAGTATTGTCACTTTTACCTCTTAAGACAGTATTACTATTGGCTGAACCAAGGTCAAGTCGCAGGTTCTTTGCTGACAATTGTGGAGCCTGAGCCAACCAACAGTTCAGCTTTAACTGACATATTAGCCAACACCACTACAATGAGGCTTGATCCTTTTGAGACTCTATCAACTCCTCTGCCCATTATGGACAAACACAAATTCACTTCCTTGCCTCACTGGAAATTTGATGATCTGTAT[C/T]GATTGGACCCACATTTTAAACCGAGTGTAAGTACAGTCTACAATAACTATAGAAATGTCAATCTGTGTGTGGTTGCTTGTATATCAATTTAGCCTTCTGCTGAATGCTGCATTCTGATTGGCAGAAGAACATTGTGTAAGGCAGGGGCATCAAACTCAGCTCAACACAAAGGATCAACACAAATTCATTCGTTTAACACAAATCATCTAACTAATTGAGTCCTTCAGGCTTGTTTGACACCTGTGCTCTGAGGTGTACAATTATTTTAAGTAAACCGCACATATTTTGCCGCTGTTTGAGGAAAAAAAAAGTCTTGAAATACAACATCTGCAGAATGTTCAGGTCTACTGTAGAGCAGGGTGTCAAACTCATCTACTAGATGGCTGGAGCCCTGGAGAGTTTAATTCCAGCTCTGCTTCAACACACTTACCAGTAGGTTTCAAACAAGCCTGAAATAGTCAATTAGTTTGATCAAGTGTGTTTAATATAGCTAAACTGCA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa22086
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000064335 Essential Splice Site 336 427 None 9
ENSDART00000112847 Essential Splice Site None 270 None 10

The following transcripts of ENSDARG00000043816 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 12 (position 22050933)
Other Location(s):
Assembly Chromosome Position
GRCz10 12 20576514
GRCz11 12 20698388
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GTTCCTACTACATCCTCCATCCAGATTTTCTCAGATATGTGCGAAACAGG[T/C]ACATCCTGAAAATGCATAATTTATTCCTCTTTATGTTTCTGTAAATTTAT
Long Flanking Sequence:
TTAGAAATTTGCGTTAACAAGCAGTTGGACAGGTGTACCTAATAAAGTGGCCGGTGAGTGTATATTTTCTTTATGAAAATAAAATTGTGTTAGTGATGCTTAATCTCCCTTTTAAAAACCTTTGACTAATGTCACAAGTTTCAGTTCAGTTTTTCTGTCTTATAAATGAATGCAAATTGGCAAATATTAAATTAAATTCTGCCTCATTTTCATATTTCAACATACCATTTTAGAAAACATACAGAATTGTTTTGCAGTTATTAATATATTTGAGTTAATTATTACCCAGATCATCTGAGGTGTTTTTCTTATCCGCCAAAAGATTAAGCTTGTTTTTGAGGATTGCTGCTTACATCTAATGTAGATTGGATTAAATATCCCGTTAGATGATTATTTATTATTTCATATTTTGAAGGCCAAGGAAATATTACAGCGGGCATTTTAATGAAAGTTCCTACTACATCCTCCATCCAGATTTTCTCAGATATGTGCGAAACAGG[T/C]ACATCCTGAAAATGCATAATTTATTCCTCTTTATGTTTCTGTAAATTTATATATTGTGTTTTTGTTTTGTTAATAGTCAAGTTTACTTTTTCATCTTAGATTTCTTAGGGCTAAACAACTAAAAACAAAGCGGTGGTGGGTGGTCAGACCCACTAATGGAGCATTCACTCTTCTGTTGGCTATGCACACCTGTGACATTGTAAGTGATCTTTCTCTTTTTTTTAAGATTTATTTATAACTTCCCTTTTAGATTGAAGTCTTGTTTATTACTTTAATAGAGATTTTATCTGATGAACTGACCGTCTATCAGATAAACCGACCTTTATTGATTTTTATCATGTGAGCAGTTATTTTTTCCATCTGTTGAGCTGACGAATATTTTTATAACAGTGTTTTGTTTTTCCTGTTCTTATAGGTTAGAGTCTATGGCTTTTGCACGGCTGACTACCGGAAATATCCAAGCTACTATTATGACACCAAACACACTAAACTAGTGTTTT
Associated Phenotype:
Not determined