ZMP

pde6c

Ensembl ID:

ENSDARG00000078461

ZFIN ID:

ZDB-GENE-040426-1664

Description:

cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha' [Source:RefSeq peptide;Acc:NP_9571

Human Orthologue:

PDE6C

Human Description:

phosphodiesterase 6C, cGMP-specific, cone, alpha prime [Source:HGNC Symbol;Acc:8787]

Mouse Orthologue:

Pde6c

Mouse Description:

phosphodiesterase 6C, cGMP specific, cone, alpha prime Gene [Source:MGI Symbol;Acc:MGI:105956]

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa41953	Essential Splice Site	Mutation detected in F1 DNA	Not yet available
sa22017	Nonsense	Available for shipment	Available now

Mutation Details

Allele Name:

sa41953

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

A > T

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000106501	Essential Splice Site	208	852	3	22

Genomic Location (Zv9):

Chromosome 12 (position 5722417)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	12	5100621
GRCz11	12	5135578

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

TGTAAGCAGACATTATTCACCATTTAGTAAATGTGTTGCGAATGTTTTTC[A/T]GGTATTCAGCAAGTACATCATATTTGCCACAGTCATCGCCCTGCAGCATT

Long Flanking Sequence:

CACATTTCTAAACATAATAGTTTTAATAACTCATTTCTAATAACTGATTTATTTTATCTTTGCCATGATGACAGTCAATAATATTTGACTAGATATTTTTGAAGACACTTCTATACAGCTTAAAGTGACATTTAAAGGCTTATCTAGGTTAATTAGGTTAACTAGGCAGGTTAGGGTAATTAGGCAAGTTATTGTTTAACGGTGGTTTGTTCTGTAGACTATCGAAAAAATATATAGCTTAAAGGTGCTAATAATTTTGACCTTAAAATGGTGTTTAAAAAATGTAAAACTGCTTTCATTCTAGCTGAAATAAAACAAATAAGACTTTCTTCAGAAAAAAAAAATATTATTATACATACTGTGAAAATTTCCTTGTTCTGGTAAACATCATTTGGGAAATATTTAAAAGAGAAAAAAATTCAAAGGGGGGCTAATAATTCTGACTTCAGCTGTAAGCAGACATTATTCACCATTTAGTAAATGTGTTGCGAATGTTTTTC[A/T]GGTATTCAGCAAGTACATCATATTTGCCACAGTCATCGCCCTGCAGCATTACACCAATTACATGTATAATGTGGAATCCAGAAGAAGCCAGGTAACCACACAGACCACATCATCTCTTAATAATGCAATACAAAGCTGAGTTTGACTGTAAACCACTGGTGCAGGTTCTTCTGTGGTCTGCGAGCAAAGTGTTTGAAGAGCTGACGGACATCGAGCGTCAGTTTCACAAGGCTCTGTACACCGTCAGAACTTACCTTCAGTGCGAAAGGTACTCGTGCGGCCTGCTGGACATGACCAAAGAGAAGGTTTGTGACAATCCTACATAGGGCTGCACAATATATTGGAATATTACTTGCAGTAGTCACATCTAGGCCCACACAGAATCTGCGCACAGATTTTTAGCCCATCATTAATTCTGTTTATTTACTCGAGTAAATGTGTGTAAATCTTTTTTTAGACGAAAATGTTCGTCTGATTTGTGTACAATGCAGTTTGTACAG

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa22017

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC

Mutation:

T > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000106501	Nonsense	435	852	10	22

Genomic Location (Zv9):

Chromosome 12 (position 5713654)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	12	5109384
GRCz11	12	5144341

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

CAGGCTCTAACACAGTTCCTGGGATGGTCCGTACTGAACTGCGACACATA[T/A]GACAAACTGAACCGGATGGAGTGGAGGAAAGAAATTGCAGAAGAAATGGT

Long Flanking Sequence:

ATGCCAAACAAGCTTTATAATCAATCATCAGCTAAGTGTGAACTCTTGAAACAGCCAATATCTTAATAACAGGCAGGTAATAAGCCACTAGTTAATAGTGAGAATTGGCACTTCAGTATAATTTGAACTAATGTGTTACCAAAAGAGAAAACGTGCTATGATCGAGGTGACTGTAACCATTCTTCTAATCATCACACTGTCTTGTGCAACTTTTCAGAAAGAAGCTGTGGACGAGACTGGCTTCGTGATCAAAAACGTTCTCTCCCTTCCCATTGTCAACAAGAAAGAAGAAATTGTCGGTGTGGCCACTTTCTTCAATCGAAAAGACGGCAAGCCATTCGAAGAGCAGGATGAACAGATTACTGAAGTGAGTGGCCACACGCTCACAACAGCTTTGACTCTTAGTATCATGTGCTGCGACTTTACTTTCTGTTTCATTGAACTTTATTTCAGGCTCTAACACAGTTCCTGGGATGGTCCGTACTGAACTGCGACACATA[T/A]GACAAACTGAACCGGATGGAGTGGAGGAAAGAAATTGCAGAAGAAATGGTCATGTATCAGACCAAAGCCACTCCGGCTGAAGTCCAGCAGATTCTGGTTAGATGATGAGCTTTTTCCTGTCAGAAAAAAAGTCCAGTCTTGTTTTATAACATTGACTAAACATTTTATGTGTCTCATTAGAACACAAAGGAGAAGTTTGACCAGAACCCGGAAGACTGCGATCAGAAAGAAATGTACAAACTCTTGGTACGACCAGATTTCAGAGTGAACACGAGACTGATTATTAAAAAGGATGATTTACTAAATCCACTTTTATTTTAACACACAGAGAGCCAACATTCCAGAGGCCAAAGATGTCGATCTGCTAGAATTTAGTTTCAGTGACTTCCCTCTGACTGAAACCGATCTCATCAAGTGCGGCATTCGCTGCTTCTTTGAACTGGGAGTGGTGGAGAAGTTCAAGGTGCCAGCAGAGGTGAGACGTCCGCATCAACACACTA

Associated Phenotype:

Not determined