ZMP
mbd1
Ensembl ID:
ZFIN ID:
Description:
methyl-CpG binding domain protein 1 [Source:RefSeq peptide;Acc:NP_001038218]
Human Orthologue:
MBD1
Human Description:
methyl-CpG binding domain protein 1 [Source:HGNC Symbol;Acc:6916]
Mouse Orthologue:
Mbd1
Mouse Description:
methyl-CpG binding domain protein 1 Gene [Source:MGI Symbol;Acc:MGI:1333811]
Alleles
There are 8 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa21916 | Nonsense | Available for shipment | Available now |
| sa35091 | Nonsense | Available for shipment | Available now |
| sa21917 | Essential Splice Site | Available for shipment | Available now |
| sa21918 | Nonsense | Available for shipment | Available now |
| sa31833 | Essential Splice Site | Available for shipment | Available now |
Mutation Details
Allele Name:
sa21916
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000033914 | Nonsense | 13 | 964 | 1 | 16 |
| ENSDART00000035629 | None | None | 850 | None | 15 |
| ENSDART00000124131 | Nonsense | 13 | 961 | 2 | 17 |
| ENSDART00000147179 | Nonsense | 13 | 66 | 3 | 3 |
Genomic Location (Zv9):
Chromosome 11 (position 26494227)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 11 | 25323052 |
| GRCz11 | 11 | 25560668 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GTGGCTATACAACCATGGACACAGAGGAAGTAGCAGCTGAAGCACCTGCA[G/T]AAACAGCAACCGAGGAAAAAGATGCAACTTCAGAGGAAAACAAAGAGTCC
Long Flanking Sequence:
GTTTTTAAAAATGTCGCCGTCGTATTAATGACTTTTCATGTAACCGAATCACAAAACTCCGCAAATAGTGCAAGAAAACCTCACTATACAGTGTCTTTTGCAATAATTTCACGCTTGCTAGCACATTAGCCACCATGCTAACTATTTGCGCTGATACTTGCTCGGCTGTGTCTCAAAACCTAGCGTGTTGGCTACCTAGAACGCACCAAGAGTCGGGGTTTAGTAAACAAAACATTTGTTTTTTTCTTCCGTAAAGCAACAATAGGCCTTTGAATGCAGATGCGGGTGCCTGTATCGAATGTATAACACACAGCAAAAAGAGTATGCAGATAACTTGACGTTAATAAGATGTAAGAGCTTCACTTTGACTCCTCTGACTTTTATTATGCTGCTGAAAACATTGTGTTTTAATGTATGTTTTTTTATTGTAGTTCAAATAGGAAAAATAAGGTGGCTATACAACCATGGACACAGAGGAAGTAGCAGCTGAAGCACCTGCA[G/T]AAACAGCAACCGAGGAAAAAGATGCAACTTCAGAGGAAAACAAAGAGTCCACGACAAGCACAGACATCCAGGATCATGTCACGGACAAAAACCAAGAGGAAGATGCAGCTGCAAAGGAAGACGAAGAAGCTGTTATTGACAAGGAAGCTGAAGAAGCTGTAATTCAGAAAAAAGATGAAGAAGCAGTAGTTCAGAAGGAAGGTGAAGAAGCTATAATTCAGAAGGAAGGTGAAGAAACTATAGCCGAGAAAGAAGGTGAAGAAACTGTAACCGAGAAAGAAGGTGAAGATGCTGTAACAGAGAAAGAAGGTGAAGAAGCTGAAACCGAAAAAGAAGGTGAAGATGCTGTAACCGAAAAAGAAGGTGAAGATGCTGTAACCGAAAAAGAAGGTAAAGATGCAGTAACCGAGAAAGAAGGTGAAGAAGCTGAAACTGAGAATAAAGGTGAAGAAGCTGAAACGGAGAATAAAGGTGAAGAAGCAGTACTCGAGAAGCAAGAT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa35091
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000033914 | Nonsense | 523 | 964 | 7 | 16 |
| ENSDART00000035629 | None | None | 850 | None | 15 |
| ENSDART00000124131 | Nonsense | 523 | 961 | 8 | 17 |
| ENSDART00000147179 | None | None | 66 | None | 3 |
Genomic Location (Zv9):
Chromosome 11 (position 26500056)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 11 | 25328881 |
| GRCz11 | 11 | 25566497 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACTTAATATCCACTCTCGTAAAGTTGTTAAATGTCGCAAACGGAAATGTT[T/A]ACACCCTGTTCGTAGGGAGAGGGGTTTTAAGGTACAGTGCTATATATTAG
Long Flanking Sequence:
TGGGAAAGTCTGTCTTCACTTTTTTGTACTTTAGAGTCTGCATTAGATGTAATAAAACCTATTCTTATGAAGAAGGACAAACTTTGTGCAAGGACTGCAGGATAGAGAATAGAGCATGTAAGTCAAATGCTATTCATTTAGTTTTGTGAGTGCTGGTTAATAATAAGCTTTATCATAATTTGTGTCATTTTAAATGCATAGTTATTATATTCCTCTTTGTTTTCTTTGTTTTTTGCTTTAGTGGCAAGCAGAAAACCATACAAAAAGGTGACAGTCTTTTTACTTTATGGAATGTTTTGTGTAACCTATTAAGAAATGTATATTTATTTATTGTATTTATTTATGGATTTATTGTTCTTAGTGGGTTCCATGTGGTCGATGCTGGGCTTGTCAAACAACAGTGGACTGTGGGAAATGCGTTAGCTGCAGAAATGGCCGGCTGCGCCATCGACTTAATATCCACTCTCGTAAAGTTGTTAAATGTCGCAAACGGAAATGTT[T/A]ACACCCTGTTCGTAGGGAGAGGGGTTTTAAGGTACAGTGCTATATATTAGCTTTTTAAAAAGTTTTTATCAGTATGATGTTTTTATTAATCTTTTCAGCTTAAAAGGGGATATATTTTCCACTGACAATCATTTAGCTTTCAACAAAACACAATGAAAAAACTTCAATAACGTAAATAATAATAACAGTAGAGATAAAACAATAATGTAAACTATAATAATAACAAAATTGACAAATCAGGAAGGGTCAAATATACACCCAATAGTCAAACTCTTTATTGAATAAAATTAAGTTTTTGTTCTTAATCTAAGGAGGAGACTGTGAGAGAAAGCTTGCTGGTTATTAAATCAGAAAATGCCTACCTTGCAGATTTAAACTTGATGGCAATTAATTTATGCTTCTACGAAACCTGGACCTTACAAATTTGGTCCAGATATTTCTGAATACATTCATTTGAAGGCGAAGGGAAAATGCAATATTTTCTATAGCGTAAAGATCGC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa21917
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000033914 | Essential Splice Site | 742 | 964 | 14 | 16 |
| ENSDART00000035629 | Essential Splice Site | 628 | 850 | 13 | 15 |
| ENSDART00000124131 | Essential Splice Site | 739 | 961 | 15 | 17 |
| ENSDART00000147179 | None | None | 66 | None | 3 |
Genomic Location (Zv9):
Chromosome 11 (position 26506158)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 11 | 25334983 |
| GRCz11 | 11 | 25572599 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTTGAACCGAAGCTACTGTATATAAATGTTGATTTGTCATTTTCTCTCTC[T/A]GGAGACGATGAGTCCTCATGTGCGAACTGGACAGGCGGAGATGATCAAAG
Long Flanking Sequence:
CACATATGGACGAGGTACACCCGGGTCCAAGAAGATGTGGGGTTTTGAGATGTCAGATGATATGCCTGAACAGTACATGCAGAAAAATTCAGCTCACCTGATGAATCAAGACCGATTCCTGCACCCCAGTTACAATGGAAAGGTATTTCAGCAGACTCCTAAAACATCACCACTTAATCATCTTCACTTCCAATAACTTATTTCTGTTTTTATACTTACTGATGAAGGCCTACAGTTATACTGATGTGCCAAACAGTCATATGGTGAACAACATGCCACTCTATAATCCACACAAAGTTGAGGTATGTTCTCAACATAAACATGAAAAAAATCTATACGATAGCTGTAAACTATTAATCAAATCGTGATCATTTCAAAACTACTCTCAAAGCAACAGTCCATTAACAAAATAAAAAGCTAATTCCATTGTCAGAATGCATGTTCTTACTATTTGAACCGAAGCTACTGTATATAAATGTTGATTTGTCATTTTCTCTCTC[T/A]GGAGACGATGAGTCCTCATGTGCGAACTGGACAGGCGGAGATGATCAAAGAAAATGGGCTTCAGAGCATCAGTAACAGAAGCTTTGTGGCTAGGGTAAGCTCCTTATAATTTTCTGTGTTTAAATGAATAAAAACAAGAAAGAAAAAAAGATTAGTGAGTGGGAAATAAGCATAGCTCACCTGAGTGGTAAAAATATTAAAATAAGTTTGGTATTGTGCCTCCTTTCTTTTTTTCCCTTTTCTCTACATGATATTATCAGAAGGCAGACTCAAAGTGACCTCTGATGATAGTATTCATTTCTCTTTTATTTATTTATTTTTTTTTTTTGCCAGCACGTTATCTTGAAAAACCAAGGCGACTGTAACGCATAACCTTTTAGATTATTGTAAATTAACTAAACATTCTGAAAATGAATAACTTTAAAATGCATTTAATGGTAAGAAATTTATGAAGGATCATGTGAAACTGAAAACGGGTAATAATTCAGAAAATTCAGCTT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa21918
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000033914 | Nonsense | 786 | 964 | 15 | 16 |
| ENSDART00000035629 | Nonsense | 672 | 850 | 14 | 15 |
| ENSDART00000124131 | Nonsense | 783 | 961 | 16 | 17 |
| ENSDART00000147179 | None | None | 66 | None | 3 |
Genomic Location (Zv9):
Chromosome 11 (position 26507481)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 11 | 25336306 |
| GRCz11 | 11 | 25573922 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTTATTTACAGAGACCTGACGTTCCTCCTACCACTCAGTTTGACAGCACT[G/T]GAAATCCAGGCTCTAAAACTGAAAGAAACCGATCGCAGGATGAACAATCA
Long Flanking Sequence:
TGGATTTTGTATGTTCTCCACATGTTTCGTTTGGGTTATCTCCAGATGCTCCTGTTTCCCCCACAGTTCAAAGACATGTGGTATAGGTGAATTGGATAAGCTAAATTATCTGTAGTGTACGAGTGTGTGTGAATGTTTCCCAGTGATGGGTTGCAGCTGGAAGGGCATCCGCTGTGTAAAATATATGCTTGATAAGTTGGTGGTTCATTCCGCCATGGTGATCCCAAATTAATAAAGGGACTAAGCCCAAAAGAAAATGAATGAATAATATACTGTAAAAATATTCTCTAAATTCAGAATTTGACAGGGGTATGAATAATTTCAGGCTTAACTTTCTGTATGCGTCTAATGTATGTGTTTGTGTATGTATATGTGTACTGTAAATGTGTGTCTGTGCAGTAATAATTGTATTACAGTAAAGTATTTGCAATTGCTTATTAGTATTTCACATTTATTTACAGAGACCTGACGTTCCTCCTACCACTCAGTTTGACAGCACT[G/T]GAAATCCAGGCTCTAAAACTGAAAGAAACCGATCGCAGGATGAACAATCAGAGGGCGAGTCTTTCCCATCGGTAAGAAGACATTTCACCGATTCTGTCCCAATGATAAGGCTGTTTCATTAAAGTCCACCTGAACCAGACATGGCTGAGACTTATTTCAGTATGTTCATGAACTTACAGTTGAAACGGAATATTGAGTGAGGGGGGCTTTCTTTTGCACATCATAGCATACTAACAGTAAGAGGTGCGTGGTTTAAAATGATTGTAGCTAAAGTTGTGAAACTGACGTCAACAAAGAAGAACCCCCACTACAAACGCTGAACAAGATTGCCTAAACAAAATTAAAAAAAAATCAGTGGATTAACTTGATTGGATTATTAATCACATAAAGAAACAAAATGTAGCTAGTAAAATGAACATTGTAAATTTCCATACAAAGATGTGAATTAAATTTATGTGCAAAACTGGAATTTATAATAAAAGATTTGCGAATAAACCAGC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa31833
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
A > T
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000033914 | Essential Splice Site | 810 | 964 | None | 16 |
| ENSDART00000035629 | Essential Splice Site | 696 | 850 | None | 15 |
| ENSDART00000124131 | Essential Splice Site | 807 | 961 | None | 17 |
| ENSDART00000147179 | None | None | 66 | None | 3 |
Genomic Location (Zv9):
Chromosome 11 (position 26508598)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 11 | 25337423 |
| GRCz11 | 11 | 25575039 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AAATAGGTGGATGGAAACATAGCTAGTGCCCACACTCTTCTTTCTATGAC[A/T]GATCACTCAGATATTCAGCGTGGCAGGCAGCGACCACGCCGTCCAGGGCA
Long Flanking Sequence:
CTGATAAACTGACGGCAAATATCAAAAAGGAAAACAGAGTTTGCTGCAGTTGGAAAAGCTGCGTGAGTGTTTTTCTTGTATCATAAATGACTTGCGCCATTAGAAGACAATGTCGACATGCAATGAGCACGCAGTGGTTTTTGCAGACATTACACTCTCGCTCATGACAGTCCTGAACGTAATAATAATTCTATAATTATAATAATACTTATGATGGACTTTTGGTTAAGGCATTTTAGATTGACTAAATATTTAATGTTTTACAATGTGCTCAGCCTGCTGGTTTATCCATGGACCCTTTTCACATTTCGGGGTTTCTCAGTAGCTGAGGTCGTCATAGCTGGATAATCTTAAAAGCACAGTGAATGGGAGGGCACAACAAAATGCAGTTGTTTTTATGTGCATTTTTTAAAAATCTGTGCGCATCTTGACTTTCCAAAATGAGCTAAAAAATAGGTGGATGGAAACATAGCTAGTGCCCACACTCTTCTTTCTATGAC[A/T]GATCACTCAGATATTCAGCGTGGCAGGCAGCGACCACGCCGTCCAGGGCATGGACGTAAATCACGAACTGATGCCGCTCTTGAGATCTCTACGCAGTATAGTCCTCCCAGTTCTCTGGTTCTGCGTGGTGGTGGAAGGGCCGCGGTTACAGCTGCTGCAGTGCTCCAAACGCTCCACCATGGCGGATACCGTCATCTACATCGAGCCCGGCTTTCACTACCACATCAGCGTCCAGGACCAGCCGCTGCTGCCCACACACAAACTCTACGACTGCCACCCGTCTCGCCTCACCAGCGCGGCTGAGATCATCGCCCTCATCGAGGATCTGGAGAAGCACTCCGTCTGCCAAGGCTCAGAGCACAAACACAGCTCAGACCTGGTGATTCCCGAACGGGCGGCTACTTGTGACTTCCTTATTTCAGCAGAGGTAGAACGCTGTGAGAAATGCCAGACTTTACAAAGGGCGTAGAGAGAAAGAGAAAGCTGGAAATTGCTCTTAT
Associated Phenotype:
Not determined