Busch Lab

ZMP

lrig1

Ensembl ID:
ENSDARG00000075625
ZFIN ID:
ZDB-GENE-031113-23
Human Orthologue:
LRIG1
Human Description:
leucine-rich repeats and immunoglobulin-like domains 1 [Source:HGNC Symbol;Acc:17360]
Mouse Orthologue:
Lrig1
Mouse Description:
leucine-rich repeats and immunoglobulin-like domains 1 Gene [Source:MGI Symbol;Acc:MGI:107935]

Alleles

There are 7 alleles of this gene:

Allele Name Consequence Status Availability
hu2115 Nonsense Confirmed mutation in F2 line Not yet available
sa21875 Nonsense Available for shipment Available now
sa21876 Nonsense Available for shipment Available now
sa21874 Essential Splice Site Available for shipment Available now
sa17507 Essential Splice Site Available for shipment Available now
sa35054 Nonsense Mutation detected in F1 DNA Not yet available
sa21873 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
hu2115
Status:
Confirmed mutation in F2 line
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000115085 Nonsense 209 1022 6 18
Genomic Location (Zv9):
Chromosome 11 (position 16743620)
Other Location(s):
Assembly Chromosome Position
GRCz10 11 16224320
GRCz11 11 16358955
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CAGCTGTTTTGCTCATTTTATTTACTTTATTTCTGTGTTTTGTAGGGAGT[T/A]GAGTAGGAACAGGTTGCGGTTGATCGAGGGACTCACCTTCCAAGGTTTGA
Long Flanking Sequence:
ACCCACCACATCCTGAAAAACCTACCACTTCTTCCGTCATCATTATATTTTACAGGAAAGCCTAAATGCTTTCATACATGTGATTCAAATGACGCAAGAGGCGATCTCTCTGTGATCCTTAAAAAATTATAATTAATCTACCAGAAAAAATATTATTAATTCTTGGGCCACGTGTGTTCCGAATCTTGATCCATTACAGCCCTAATTTAAGTTTATGAGTATGTTGTCAATTAGCATTGTGCAATACACAAAATATGTTTTTGAAAATTTGTAAAAAGAAAAACTGACTTTAACATGTGTAACATGTAACCTGCTCAGTATTGCCTATTTGTTGAAATTGTACAAAAATAATGTCATGTTCATTCATTCAATAATAACTTCATACAGGGTTTTATACAGTTTTTCGTTCTCATTTCTTGATTTATAAAGTCATTTTAATTGCATTCGTCTCAGCTGTTTTGCTCATTTTATTTACTTTATTTCTGTGTTTTGTAGGGAGT[T/A]GAGTAGGAACAGGTTGCGGTTGATCGAGGGACTCACCTTCCAAGGTTTGAGCAGTTTAGAAGTTCTCAAGCTTCAGAGAAACAACATCAGCAAACTAACAGATGGGGCATTCTGGGGTCTGGCCCGGATGAGGGTTCTGTGAGTCCAAACTTTCATGTTTCTACAACTTAAAAAGTGTTATACAAGTATTCATATACATTTAAATAACATGTAATAAAGTGATATGATCATTTGCATTGCTCATTGTAAAGTTTTTCACATTTTTTTGTAGGCACCTGGACTATAACAGTCTACGAGAAGTGAACAGTGGCTCTCTGTATGGTCTGGAGTCTCTGCTGCAGCTCTACCTCGCCAACAATTCCATCTCAAACTTTAACCCTGAGGGTTGGGGCTTTTGTGAGAGACTTCGAGAACTGTGAGACATCACTTTTCCTTCTCTTCTCATCCTTACAGATCCAGGATTTACTGTTTTGCTGATATAAGATCCAGTCATGATGATT
Associated Phenotype:
Normal
Stage Entity Quality Tag
Larval:Day 5
ZFS:0000037		 whole organism
ZFA:0001094		 quality
PATO:0000001		 normal
PATO:0000461

Mutation Details

Allele Name:
sa21875
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000115085 Nonsense 259 1022 7 18
ENSDART00000115085 Nonsense 259 1022 7 18
Genomic Location (Zv9):
Chromosome 11 (position 16743336)
Other Location(s):
Assembly Chromosome Position
GRCz10 11 16224036
GRCz11 11 16358671
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GCATTGCTCATTGTAAAGTTTTTCACATTTTTTTGTAGGCACCTGGACTA[T/G]AACAGTCTACGAGAAGTGAACAGTGGCTCTCTGTATGGTCTGGAGTCTCT
Long Flanking Sequence:
TGACTTTAACATGTGTAACATGTAACCTGCTCAGTATTGCCTATTTGTTGAAATTGTACAAAAATAATGTCATGTTCATTCATTCAATAATAACTTCATACAGGGTTTTATACAGTTTTTCGTTCTCATTTCTTGATTTATAAAGTCATTTTAATTGCATTCGTCTCAGCTGTTTTGCTCATTTTATTTACTTTATTTCTGTGTTTTGTAGGGAGTTGAGTAGGAACAGGTTGCGGTTGATCGAGGGACTCACCTTCCAAGGTTTGAGCAGTTTAGAAGTTCTCAAGCTTCAGAGAAACAACATCAGCAAACTAACAGATGGGGCATTCTGGGGTCTGGCCCGGATGAGGGTTCTGTGAGTCCAAACTTTCATGTTTCTACAACTTAAAAAGTGTTATACAAGTATTCATATACATTTAAATAACATGTAATAAAGTGATATGATCATTTGCATTGCTCATTGTAAAGTTTTTCACATTTTTTTGTAGGCACCTGGACTA[T/A]AACAGTCTACGAGAAGTGAACAGTGGCTCTCTGTATGGTCTGGAGTCTCTGCTGCAGCTCTACCTCGCCAACAATTCCATCTCAAACTTTAACCCTGAGGGTTGGGGCTTTTGTGAGAGACTTCGAGAACTGTGAGACATCACTTTTCCTTCTCTTCTCATCCTTACAGATCCAGGATTTACTGTTTTGCTGATATAAGATCCAGTCATGATGATTGTTAACACATTAGAGCGCACTTATGTCAGTGAGATAGGAAGATTCGTAAGAATTGAATAAAAAGTACACACAAAGCTGCTGTAAAAATTGCAGAAATCTTCCAAAATAATCTTCAAATATGTGGAGTTGAAGCAATATTGGAAAATGCTTTTGACCACAGTGCCAAAACACACATGCAGCCAATCAGCAGTAAGGGGCGTGTCTAGTAATGATAATGGAGATTAGGGCTGTTTCTCAATACCAAGGATTTACATTCTTGTGGCGGCCAGTCTTGCCAAGTTACC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa21876
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > G
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000115085 Nonsense 259 1022 7 18
ENSDART00000115085 Nonsense 259 1022 7 18
Genomic Location (Zv9):
Chromosome 11 (position 16743336)
Other Location(s):
Assembly Chromosome Position
GRCz10 11 16224036
GRCz11 11 16358671
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GCATTGCTCATTGTAAAGTTTTTCACATTTTTTTGTAGGCACCTGGACTA[T/G]AACAGTCTACGAGAAGTGAACAGTGGCTCTCTGTATGGTCTGGAGTCTCT
Long Flanking Sequence:
TGACTTTAACATGTGTAACATGTAACCTGCTCAGTATTGCCTATTTGTTGAAATTGTACAAAAATAATGTCATGTTCATTCATTCAATAATAACTTCATACAGGGTTTTATACAGTTTTTCGTTCTCATTTCTTGATTTATAAAGTCATTTTAATTGCATTCGTCTCAGCTGTTTTGCTCATTTTATTTACTTTATTTCTGTGTTTTGTAGGGAGTTGAGTAGGAACAGGTTGCGGTTGATCGAGGGACTCACCTTCCAAGGTTTGAGCAGTTTAGAAGTTCTCAAGCTTCAGAGAAACAACATCAGCAAACTAACAGATGGGGCATTCTGGGGTCTGGCCCGGATGAGGGTTCTGTGAGTCCAAACTTTCATGTTTCTACAACTTAAAAAGTGTTATACAAGTATTCATATACATTTAAATAACATGTAATAAAGTGATATGATCATTTGCATTGCTCATTGTAAAGTTTTTCACATTTTTTTGTAGGCACCTGGACTA[T/G]AACAGTCTACGAGAAGTGAACAGTGGCTCTCTGTATGGTCTGGAGTCTCTGCTGCAGCTCTACCTCGCCAACAATTCCATCTCAAACTTTAACCCTGAGGGTTGGGGCTTTTGTGAGAGACTTCGAGAACTGTGAGACATCACTTTTCCTTCTCTTCTCATCCTTACAGATCCAGGATTTACTGTTTTGCTGATATAAGATCCAGTCATGATGATTGTTAACACATTAGAGCGCACTTATGTCAGTGAGATAGGAAGATTCGTAAGAATTGAATAAAAAGTACACACAAAGCTGCTGTAAAAATTGCAGAAATCTTCCAAAATAATCTTCAAATATGTGGAGTTGAAGCAATATTGGAAAATGCTTTTGACCACAGTGCCAAAACACACATGCAGCCAATCAGCAGTAAGGGGCGTGTCTAGTAATGATAATGGAGATTAGGGCTGTTTCTCAATACCAAGGATTTACATTCTTGTGGCGGCCAGTCTTGCCAAGTTACC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa21874
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000115085 Essential Splice Site 426 1022 11 18
Genomic Location (Zv9):
Chromosome 11 (position 16731071)
Other Location(s):
Assembly Chromosome Position
GRCz10 11 16211771
GRCz11 11 16346406
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GCTCCATCCAACCCGAGGCATTCAGCAAGATGAAGAACCTGCGCTACCTG[T/C]GAGTCTCAGTAAACCTTTTCACATGCACACACTCGTCATCCGATCATGTT
Long Flanking Sequence:
TTATTTATATTTTTTGCTAAAGAAATCAAATCTTAATAGGCAAAAATGGATGAAACAAATCAAAAGTGAAGAGTAAAAACATTTACAAATCCTTAAAATTGTTTTTATTTCTTCATAAATTGTTTTCATTTGAACTTTCTCTTCAAAAAAAAAAAAATTAAACACAATTTACAAGATAAATATTAACAGTAACCAATGCTATTGAATTATGGGCCATATGGTCAGTTTCATAAAAAAGATAATTGACTTTAAGCACTTCTCCAGACTCTGTAACTCTGTCCGATATTTGGATCTTTCCACCTTGTTGGAAGTTATCCTGTATAAAAATAGGCTACGATATCTGCACACTAGAGCACTGCAGCTGTATGTGAACATTCGCATGTCCTCTTTCTGTCACGCCTGAGGGCCCTGTTTAATCTCTCAACAGGAATTTAGGGGAAAATGCCATCCGCTCCATCCAACCCGAGGCATTCAGCAAGATGAAGAACCTGCGCTACCTG[T/C]GAGTCTCAGTAAACCTTTTCACATGCACACACTCGTCATCCGATCATGTTTCTTGACATGACAAATGTTTTGGCTGATAGTAGAAGTTATTGTGAATTATTATACATGTTTAGACATGAAGTAATTTATTTACTTATTCATTTCAATATTTTTTTATTTTTTTGTTATTATTGTTATTTGTTTTTTTATTATGCATTTGTTTTTGTTCAAATTAAATTATTTTAGAAACATTTTGAACAGTAATCAGTGTTACTTATTAATAAAATAATATATTCTTAAATATATTAAATTTATATATTTCTTACTAAAATGCTTGCCAACATTTTCCATAAAAATGACATTGTGCTAATATTAAATTATTGTAAAAACAGAGCATTATACATCCACAGTGTATGTTAAAGTCATGTTTGTCATTTTCCTGTGTGAATAAAATGTGCACATTAATCAAATAATTTGCATTAGGTTGAAGTTTTTACTGATTTCTCTGCAGTCATATTCAG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa17507
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000115085 Essential Splice Site 426 1022 12 18
Genomic Location (Zv9):
Chromosome 11 (position 16730581)
Other Location(s):
Assembly Chromosome Position
GRCz10 11 16211281
GRCz11 11 16345916
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ATTAATCAAATAATTTGCATTAGGTTGAAGTTTTTACTGATTTCTCTGCA[G/A]TCATATTCAGAGCGACAGTTTTCTGTGTGACTGTCAGCTGCACTGGTTTC
Long Flanking Sequence:
GCGCTACCTGTGAGTCTCAGTAAACCTTTTCACATGCACACACTCGTCATCCGATCATGTTTCTTGACATGACAAATGTTTTGGCTGATAGTAGAAGTTATTGTGAATTATTATACATGTTTAGACATGAAGTAATTTATTTACTTATTCATTTCAATATTTTTTTATTTTTTTGTTATTATTGTTATTTGTTTTTTTATTATGCATTTGTTTTTGTTCAAATTAAATTATTTTAGAAACATTTTGAACAGTAATCAGTGTTACTTATTAATAAAATAATATATTCTTAAATATATTAAATTTATATATTTCTTACTAAAATGCTTGCCAACATTTTCCATAAAAATGACATTGTGCTAATATTAAATTATTGTAAAAACAGAGCATTATACATCCACAGTGTATGTTAAAGTCATGTTTGTCATTTTCCTGTGTGAATAAAATGTGCACATTAATCAAATAATTTGCATTAGGTTGAAGTTTTTACTGATTTCTCTGCA[G/A]TCATATTCAGAGCGACAGTTTTCTGTGTGACTGTCAGCTGCACTGGTTTCCAGATTGGCTCCTCACTCGAGGGCTGAACCCTGGTGTTCAGGCCACATGTGCCCATCCAGAGAGCCTAAAGGGCACCAGCATCTACCAAGCCCCACCACAGAGCTTTGTTTGTGGTATGTAGAGTTATATATCACACATGCATATTTCATAACCAACAAGTCACAATAAGGAAGAACTAACTTTATTTTCACTGCAGGTGAAAACAAAATGTATTAATACACTTCCTCAGTTGATACGTTTTTTTTCTATTACAAGATTTATAAAATGGTCGAATATGCAAACATTATGCAATATTTAATTAAATGTGCTAATTTAAGTACTTTTAAGTACATCAAAATGCCTGCTTCAACTTACTAATTTCAATTTTTGACATAGAGCCAAAGGTTTTTGCAGAGGGTTTTTTGAAATGTCTTTTTATCAACCTATAATTTCAAAAACGGATAGCTTCT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa35054
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000115085 Nonsense 476 1022 12 18
Genomic Location (Zv9):
Chromosome 11 (position 16730432)
Other Location(s):
Assembly Chromosome Position
GRCz10 11 16211132
GRCz11 11 16345767
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GTGCCCATCCAGAGAGCCTAAAGGGCACCAGCATCTACCAAGCCCCACCA[C/T]AGAGCTTTGTTTGTGGTATGTAGAGTTATATATCACACATGCATATTTCA
Long Flanking Sequence:
CATTTCAATATTTTTTTATTTTTTTGTTATTATTGTTATTTGTTTTTTTATTATGCATTTGTTTTTGTTCAAATTAAATTATTTTAGAAACATTTTGAACAGTAATCAGTGTTACTTATTAATAAAATAATATATTCTTAAATATATTAAATTTATATATTTCTTACTAAAATGCTTGCCAACATTTTCCATAAAAATGACATTGTGCTAATATTAAATTATTGTAAAAACAGAGCATTATACATCCACAGTGTATGTTAAAGTCATGTTTGTCATTTTCCTGTGTGAATAAAATGTGCACATTAATCAAATAATTTGCATTAGGTTGAAGTTTTTACTGATTTCTCTGCAGTCATATTCAGAGCGACAGTTTTCTGTGTGACTGTCAGCTGCACTGGTTTCCAGATTGGCTCCTCACTCGAGGGCTGAACCCTGGTGTTCAGGCCACATGTGCCCATCCAGAGAGCCTAAAGGGCACCAGCATCTACCAAGCCCCACCA[C/T]AGAGCTTTGTTTGTGGTATGTAGAGTTATATATCACACATGCATATTTCATAACCAACAAGTCACAATAAGGAAGAACTAACTTTATTTTCACTGCAGGTGAAAACAAAATGTATTAATACACTTCCTCAGTTGATACGTTTTTTTTCTATTACAAGATTTATAAAATGGTCGAATATGCAAACATTATGCAATATTTAATTAAATGTGCTAATTTAAGTACTTTTAAGTACATCAAAATGCCTGCTTCAACTTACTAATTTCAATTTTTGACATAGAGCCAAAGGTTTTTGCAGAGGGTTTTTTGAAATGTCTTTTTATCAACCTATAATTTCAAAAACGGATAGCTTCTCTCAATTATAGCAAACAGCCAGAAAATAAATAATTTCCTAAAGTTTTTTTTTTTTTTTTTGTAAAAACTGCTGTAAATATTCAGCCAAATTATGTACAAACAAATCCTTGTTTAAAAGCCTCCAGAACATAGATGTGAATAAAAGTAGA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa21873
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000115085 Nonsense 620 1022 14 18
Genomic Location (Zv9):
Chromosome 11 (position 16726179)
Other Location(s):
Assembly Chromosome Position
GRCz10 11 16206879
GRCz11 11 16341514
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CAGGCACCAAAGCGCGGTTGGAGTGTGCGGCCGAAGGGCATCCGACTCCA[C/T]AGGTGGCATGGCAGAAAGATGGCGGAACAGACTTCCCTGCTGCCCGAGAG
Long Flanking Sequence:
TTTTTTTACTATTAAATAATTTCATAGCCATTTTTTTGTTATCATCACACCAGTTGCACAAAATTCCCATCATGCAACAGTTGCTCATCATTTGTCTTTTTGCACAAACGTTGCATGAACTGTTTCAGCAAAATTCAGCTTGATCGTACTACAGCTTGGGCCTTTTTTATCCTCTCCGCTGTTTGCAGTGCACTTGGATTACATGCCTTGTCAGTTCTAGCAACAGATGCAAATTGACGGTCTTGAGGCATTTTTGGTCTCATGCCCGTCCAAATCAAGCTATTTCCCATCGCCAATTGTGTTAGTCACAGCTATGAATGCTGGGCTTGTTTAGTGCTGATGTAGCAACATTACGAAAATAGTCCTTGCTAAGGCTAATTTTCCTCTGCCTCTTTATGCACACAGTCCTGCCTTCGTTCGTCAAGACCCCACGTGACATCACCATCCGCACAGGCACCAAAGCGCGGTTGGAGTGTGCGGCCGAAGGGCATCCGACTCCA[C/T]AGGTGGCATGGCAGAAAGATGGCGGAACAGACTTCCCTGCTGCCCGAGAGCGGCGCATGCGTGTGATGCCTGATGATGATGTGTTCTTTATCATGGATGTGAAGCCAGAGGATATGGGTGTTTACAGCTGCACAGCGAAAAACACAGCAGGCATGATCTCCGCCAACGTCACCTTAACAGTGCTAGGTAAGCTTAGCGTTTATAGAGCTTCTTGATCATGATTAGTGTTGCGTATAGTTAGTCAGTTATTAATTTACTTTTGAACTGAAATTGTCATTCATTTTACACTAAACATAAATTCAATGATTCCGATTCAGACTAATCAAACAAATCAGTTCAGAGAAGCAGATTATAGGGTAGTATCGATTCAAATAATTATTGAGTGCAGAGTTACCACACTTTTTGAAAGTACTTGAATTTCAGACATGGATTTAAGGCCTGGAAAGTCCTTAAACAGGGTGTCTATGTGGTTTTAAAGTCTTAATGTCCTAAATCTCAAA
Associated Phenotype:
Not determined