ZMP
samsn1b
Ensembl ID:
ZFIN ID:
Description:
SAM domain-containing protein SAMSN-1 [Source:RefSeq peptide;Acc:NP_001006039]
Human Orthologue:
SAMSN1
Human Description:
SAM domain, SH3 domain and nuclear localization signals 1 [Source:HGNC Symbol;Acc:10528]
Mouse Orthologue:
Samsn1
Mouse Description:
SAM domain, SH3 domain and nuclear localization signals, 1 Gene [Source:MGI Symbol;Acc:MGI:1914992]
Alleles
There are 8 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa15266 | Nonsense | Available for shipment | Available now |
| sa21788 | Essential Splice Site | Available for shipment | Available now |
| sa27661 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
| sa21789 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa15266
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000110609 | Nonsense | 293 | 676 | 9 | 16 |
| ENSDART00000112457 | None | None | 354 | None | 8 |
Genomic Location (Zv9):
Chromosome 10 (position 39781449)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 10 | 38471420 |
| GRCz11 | 10 | 38415178 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GACACKTCCACGCACACCTGCCACAGGTCAACAGCTGAACAGGTGATGTA[C/A]AACTTTAATTTCACCCTGCCCWGAGACACGGATTGGGACAGATATGAAGA
Long Flanking Sequence:
AAAATGTATCTAAAAAATGTTTAGTACCTTTAAGAACCCCACGGACAACCTAATAAAGTGGTTAAATAAAAAATCATAACATTTCAAAAATGGATTGTAAAAACAAATAATGAACAATTATCTATATTGAAACATGATATCATGACAATTATTTTTGCTGTAACGCCTAGCCCTAACCGAGATCATGTCTTTTATTAATTAATCCTGCAGCTTTAAAATTCAAAAGCTTCATCATAATTGTTATGTCCTTCAGGTAATCTGACTGAATCCAACAGCAAACATCACAGTCCTGTCATCACCTGCATAAGTTTAACCAAAAAAGCTGAGAAGAAGCCGACAAGAGCTCCTTCACGTCCAACAGCGCAATCCCAGCAGCCCTTGCAGGAGAACGACACGCTTCCAGAGCTTTTTTATGAGTATTATAGCCCCGTGGCTTTTTCTCCAGCATGGGACACGTCCACGCACACCTGCCACAGGTCAACAGCTGAACAGGTGATGTA[C/A]AACTTTAATTTCACCCTGCCCAGAGACACGGATTGGGACAGATATGAAGATCTTTTCCAGCGTCTCGACCCCTACAAACGATACCAGCAGGACACGTGGATCACACACTCTGTCATGGAGCTGGACAAGCCTGATGCGCTGGTGAGATTCTGGACTTTTCCTTTTAAAATTATTTCCCAAGTGTTGTTTAACTGAGAGAAGAACACACTTTTGAATATAATAGTTTTATTAACTAACTTCTAATAACTAATTTATATTTTCTTTGCCATGATGAATGTATATAATATTTTCTACTTATTTTGCAAGACACTAGTACTAGGTTGTATTAACTAGGTTAATTGGGTTAACTAGGAAAGTTAGGGCAATTAGACCGGTAATTGGAAAACAGTGGTTTGTTCTGTAGACAATTGGGAATACATCATAAGGGGGCTAATAATTTTGACCCTAAAATTTCTCTCAAACATGAAAACACTTTTTTTTTTATTTATTACAGCCAAACA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa21788
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000110609 | Essential Splice Site | 340 | 676 | 9 | 16 |
| ENSDART00000112457 | None | None | 354 | None | 8 |
Genomic Location (Zv9):
Chromosome 10 (position 39781591)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 10 | 38471562 |
| GRCz11 | 10 | 38415320 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACACGTGGATCACACACTCTGTCATGGAGCTGGACAAGCCTGATGCGCTG[G/A]TGAGATTCTGGACTTTTCCTTTTAAAATTATTTCCCAAGTGTTGTTTAAC
Long Flanking Sequence:
TGACAATTATTTTTGCTGTAACGCCTAGCCCTAACCGAGATCATGTCTTTTATTAATTAATCCTGCAGCTTTAAAATTCAAAAGCTTCATCATAATTGTTATGTCCTTCAGGTAATCTGACTGAATCCAACAGCAAACATCACAGTCCTGTCATCACCTGCATAAGTTTAACCAAAAAAGCTGAGAAGAAGCCGACAAGAGCTCCTTCACGTCCAACAGCGCAATCCCAGCAGCCCTTGCAGGAGAACGACACGCTTCCAGAGCTTTTTTATGAGTATTATAGCCCCGTGGCTTTTTCTCCAGCATGGGACACGTCCACGCACACCTGCCACAGGTCAACAGCTGAACAGGTGATGTACAACTTTAATTTCACCCTGCCCAGAGACACGGATTGGGACAGATATGAAGATCTTTTCCAGCGTCTCGACCCCTACAAACGATACCAGCAGGACACGTGGATCACACACTCTGTCATGGAGCTGGACAAGCCTGATGCGCTG[G/A]TGAGATTCTGGACTTTTCCTTTTAAAATTATTTCCCAAGTGTTGTTTAACTGAGAGAAGAACACACTTTTGAATATAATAGTTTTATTAACTAACTTCTAATAACTAATTTATATTTTCTTTGCCATGATGAATGTATATAATATTTTCTACTTATTTTGCAAGACACTAGTACTAGGTTGTATTAACTAGGTTAATTGGGTTAACTAGGAAAGTTAGGGCAATTAGACCGGTAATTGGAAAACAGTGGTTTGTTCTGTAGACAATTGGGAATACATCATAAGGGGGCTAATAATTTTGACCCTAAAATTTCTCTCAAACATGAAAACACTTTTTTTTTTATTTATTACAGCCAAACAAAAGTAAAACTAAATAAAACTTTCTCCAGAATAAATAATATACAAAATAAAGAAAAAATATAAATGAAAAATTTTAAATATAGGAAACACTGTATAAATGTACTTGGTCTGTTAAACACCACTTAAATTATAATTTCTTTTA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa27661
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000110609 | None | None | 676 | None | 16 |
| ENSDART00000112457 | Essential Splice Site | 18 | 354 | 1 | 8 |
Genomic Location (Zv9):
Chromosome 10 (position 39783933)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 10 | 38473904 |
| GRCz11 | 10 | 38417662 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTCAAAGAAAACCATCAAATGCCTCTGATAAATCAAGAAACAAGCCAAAG[G/A]TAAAATATTTATCTATTTTTTAATTAATTAAAACTCTCTGTCCATCTGTT
Long Flanking Sequence:
AATAAATGAATTAACCTTAACCATAAATATAAAAGCTATTTATTATAAATAAATTTTTGGGATAAAATAAATACAGCTATGGTGAGCATCACTAGTTATTTTAAAAACATTTAGTCATTTTAAATAAATGTTCTGGTCATGCTTTTAATACTGTACATATTAATAAATGAATGCTAACAACATTGCGTTTGTAAATCTAAAGGTCACAGAAATTACATTGCAACAGTTGCATGTAGTGCTCTAAAAAGTTGTCACTGGGACGAGGGCACTTTTTTTAAAGCCAGTGATTAGAGATGTCGAGTAGACGCTCACTCACATCCTGTGTGTGGTGAGGAAGTAAGTTTCGACTTGACTGAGTGTGTGAGTGGCTTCAGGCCAGTACAAGTGTCTTCAATAAGAGCTGAGCTGCTTTCTGACAGAGGAGAAATAAAACAGAATCACTAAAAATGCTTCAAAGAAAACCATCAAATGCCTCTGATAAATCAAGAAACAAGCCAAAG[G/A]TAAAATATTTATCTATTTTTTAATTAATTAAAACTCTCTGTCCATCTGTTCTGGTGAAATAATACATTACGTAAACACTGGATTGAATTACATTCTTGTTTTTTTAGCTAGCAAACAAACTCCATGTGAAACAGTCACTGTGTTTGGAGATCTCGTCAGTGACCACAAAACTCTGTGGTGTAAAATGAACAACCAAATCAAGACTGTTGACCACTGCTAATCGAGTTTATCTCTTTGTTTTCTTTCAGCGGTCCACCAGTTTTGGGATATTTGACAGACAACAGCCCAATCAGGTCAAGGCAGAGGATAAAGTAGAAAGTTTGGTGAGTGTTTTACTTTTCAGTAATGTGCATAAACACTAGAATGTCTAGTATTGAAATTCAGGTGTGTGTGTGTGTAGCCTGTGGAAAGCCCTGAGGTGGATCCCAGTAAATCAGGAGGTCTAAGCAAGAAGATGAAGAACATCTCGCTGACCATGCGGAAAAAAATGGGCCGGAAAT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa21789
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000110609 | Nonsense | 553 | 676 | 14 | 16 |
| ENSDART00000112457 | Nonsense | 231 | 354 | 6 | 8 |
Genomic Location (Zv9):
Chromosome 10 (position 39789177)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 10 | 38479148 |
| GRCz11 | 10 | 38422906 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AAATCACACCACAACCGAGGATTCGTGCTCACCGGAGGAGCAGGAGACCT[C/T]GACCCAAAACCCTGCAGGAGCTTCTGGAAAGACTCAATCTGGAGGTGCTT
Long Flanking Sequence:
CATTGTTTCAGTTTGCTGAGCTTTGGCGTAGATGTGCTTGTGACATTTCAGCTGTGGTTTGTTCTTCACTGGTTGGTTTCTGCGTTTCCTGATGCTTTAGGTGGTGTGACCAGCGGCTCTGAAGGTTATAGTAACAGAGACAGCCTGCGTTTAGAAGAAGAGGTGCCCTTTGCAGGCCAGTTCTGCGGCAAAGCTAAAGTCCACACTGACTTTGTTCCCAGTCCATACGACACCGAGTCTCTCAAACTCAAGGTAAAACTAACCCAAGATGCTCAGTGATGAAGCTGAAGGTTGATTTTCAGAGCCATTTACATGCTTTTTGTTTATAAATATATAAGGTTGGAGATGTCATTGACATCATCAACAAACCACCAATGGGAATCTGGACTGGAATGCTGAATGGGAAAGTGGGAAACTTTAAGTTCATCTATGTCGACGTGTTGGTGGAAGAAATCACACCACAACCGAGGATTCGTGCTCACCGGAGGAGCAGGAGACCT[C/T]GACCCAAAACCCTGCAGGAGCTTCTGGAAAGACTCAATCTGGAGGTGCTTAAACACTTTTCTAAACACTTTTAGGACAAACATCCAACACAGGCTCATTGGAAATATATGTGCTCCAGCTTACATATTGGTGAAACTTCAAGTGTACTTCAATGTATGACTGCATTTTCTAGAAAAATGAATGCTGCATGGCAGTATGACATCTTTAGCTTCTTTTCGCCCTTATGATATTTACAAAGACAAATTACCCACAAATAATGGATTATTTTTTGTGCAGTTCTTGGCACACCACCAAATAAATACTGCAAAACAAGTTGACTATATCTAGAGTTGTGACAAAAAGACTTCTAAAGGTCAAGTTAGACTTTCAAACTACATTGCTATGCTCTCTTCTGTTGAGTTCTTATGGGTTTTTTGCAACAGTAGTTGGCGCTGTATGCTTTTACAAACAGCCATACTCTGCTTGCATCTGATTGCTTTCAAATACTTATTGACCCTAAA
Associated Phenotype:
Not determined