Busch Lab

ZMP

si:ch211-251d10.5

Ensembl ID:
ENSDARG00000078459
ZFIN ID:
ZDB-GENE-030131-5868
Human Orthologue:
CUX1
Human Description:
cut-like homeobox 1 [Source:HGNC Symbol;Acc:2557]
Mouse Orthologue:
Cux1
Mouse Description:
cut-like homeobox 1 Gene [Source:MGI Symbol;Acc:MGI:88568]

Alleles

There are 5 alleles of this gene:

Allele Name Consequence Status Availability
sa21765 Essential Splice Site Available for shipment Available now
sa34940 Nonsense Mutation detected in F1 DNA Not yet available
sa21764 Nonsense Available for shipment Available now
sa18988 Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa21765
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000081170 Essential Splice Site 262 1495 9 26
ENSDART00000136245 None None 223 None 5
Genomic Location (Zv9):
Chromosome 10 (position 33939826)
Other Location(s):
Assembly Chromosome Position
GRCz10 10 33041175
GRCz11 10 32985035
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GGCCAATGAGATTGAAGCGGTGATGACAGACTTGGAAAGAGCCAATCAGG[T/C]AAAAGACCATATTCCTCATGGAAAAGCCACTCGTATTTCTATTGTATGCA
Long Flanking Sequence:
CAGTCCAGCGGATTACTGTGAAATCGAGAGGGCTTAATGGCCCTGCGTGCGCGCGTTAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCATGCGGGCGAGTGTGCAAGTGTTCACATGCATGACGGGGTTATGGAAGTCCAAGCGCAACGGCTGATCTCTACACAACAACACACACATACCCAGATGCTTTCATGATGAATGCTCTCACGAACACGTCTCGTAATTGCATATTCACACACGCAAGCGGCCCAGAAGTGAGGCAAGATGCTGATTACCCGTTTTATGTTGATGTGAGGTCTTCTGTTCCACCTGGTCCCGCTCTTTACGTGACCCATTTTGTTGCATTGCGTTTGGTTGCATCATTGTGTTTCACTGCAACAAACCTGCAGCACCATTTCCCTGCTGTAATGCGCGCCGTCTTTTTTTTTTCCCTTTCTTTTTTTAACAGGGCCAATGAGATTGAAGCGGTGATGACAGACTTGGAAAGAGCCAATCAGG[T/C]AAAAGACCATATTCCTCATGGAAAAGCCACTCGTATTTCTATTGTATGCAAATCTGAGACACAATAACAGCTTGTTTTTATTATTAATATCTTTGGGCTGATGGACTGTACAGAAGTTGCAGTGCTAGTTTGCACATTTCTTTTATTAGCGCGCACGACTTTATTGGAGTCACATTTATTCAAGTTCCACATATCCTAATTCTCCCCATCTGCTTTCCTTTTGGAAGAAATCCATCATTCCCTTGCACTTTTTTGAGCTCTGAGCCCCAGCGGCTAAATCTAAATGGATGTTTTTACATCTTTTATGTGATGCAATTTAAAGAATCTCTTGCATTTATATAAATATACCTTATTATAAAAATGCATGTGGATCCGTTAGTGTATAACTACTGATGACATTTATTCTAAATTAATAAAATAAAATATGTTGTCATTTAGATCATTTTTTAAAAAGTTAATTGTTATTACTGTATAAATTTTTTAGGCAACATTAATGCTTT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa34940
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000081170 Nonsense 343 1495 11 26
ENSDART00000136245 None None 223 None 5
Genomic Location (Zv9):
Chromosome 10 (position 33934655)
Other Location(s):
Assembly Chromosome Position
GRCz10 10 33036004
GRCz11 10 32979864
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGGCTCAGCTCAGCGAGACATCAACCAACCAGATCAGCCAGCTCGAGCAG[C/T]AGCTCAGCTCCAAAGAGGCACTACTAAAGGTCAGTCCAGCCAGCCACTAA
Long Flanking Sequence:
ATCTATATTGCGAGATGAATATAATCTAACCAGATGACTTCAATTGTTCTAGTTGGAAAGAGTTCATCCATTTAGATAAACTAGGATGATCAAGTCTTTTTCTACACAGTGCATCTGCATACATTTTAAAAATAAAAACAAATAAATAAACAGTGCTTTATGGTTTTCTGAAGAGTCTGATTACTTTCAAGCTACAGAGATTGAATAATCAAATTTAAAATAATTTGATCATCATCGTGTAAATTATTAAATAATAAATAATCTAATCCTGCGATGTGACTATTGCAGATACACACATTGCGATATCGATATATTGTTCAGCTCTAGCATTTAGCATTGTAAATCGTGTGTGTTTGTGTCTACAGGACAAGTCTCTGGAGGCAGAGCTGGGTGCGAAAGAGAGGGAGGTGGAGCGTTTGGCTGAGGACGTTCAGAGACTTCAGGCCAGTCTGGCTCAGCTCAGCGAGACATCAACCAACCAGATCAGCCAGCTCGAGCAG[C/T]AGCTCAGCTCCAAAGAGGCACTACTAAAGGTCAGTCCAGCCAGCCACTAATGTGACGCATATAAAAGGCGCACCTAACCATTTTTGAAAAATGCTGTCTGACTGATACTCGGAACAGCCAATCAGCAGCAAGGGGTGTGTCTAGTCACAATGGAACCTTTTCACATTTCTGGGTTTTTCAGCAGCGGAAGTCGTCATAGTTGGGGAAACTTAGAGCGCAGTGAATAGGAGAGTACAACAAATTATATTTTTACAATCCTGTTTGCTGAAATAATAAAAGAAAAACTCCACAATGGTGTCATCAAGACAAGTTTATTTCTATAGCACTTTTACAATGTAGATTGTGTCAAAGCCACTTAACATAGAAGTTCTAGTAAAGTCCAGATTTCAGAGTTGAAGTTCAGTCAATTTCACTGCTGAAAGTTCAAACACTGAAGAGCAAATCCATCGATGCGCAGCTCCACAAGTCCCAAACCAAGCAAGCCAGTGATGAGGAAAAAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa21764
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000081170 Nonsense 1120 1495 23 26
ENSDART00000136245 Nonsense 35 223 1 5
Genomic Location (Zv9):
Chromosome 10 (position 33875379)
Other Location(s):
Assembly Chromosome Position
GRCz10 10 32976728
GRCz11 10 32920588
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AATCCCCCCTGAGCTCGGCTGAGGAGTCTGTGAAGAGCCAGCAGGAGGAG[C/T]AGATGTGCCGATCCTCCGTCCAGGAGCCCAGCGAAGCCTCCGAGTCTCAG
Long Flanking Sequence:
TAAATTAGGATAAAATAATAAAAAATATTAATTGCACAATTGCAAAGATAAAATTATTATTAAAAATATTTAATAAATAGAGGTTAATCACTAATAAATACATTTTTATTTATGATTAAACAGTCCCTTTAAACCCAGAAAGCTCTGTATGCGTGCCCCACATTGAGTCTCCCGTCTTCCTTAATTTATTTGTCTCATTATGCTCGAACAGAAGCTGTGACTTGGCATGACACGATGCATCTGTCACTGTCCATCACTTTCTGTTGCTGAGCAGGAAGACCTCGGTTTGGGGTTACGCTTTCATTGGCTTCACCCTCTCCATATTTAGACTGATCTTCATTCAGGCCTTCTGTCGATAAGTAATGCCCGGCTCACTGGCGCAACGTCTTAACGTCTCCCTTTCCACAGAAATCACCCCCAAAACCTCGGCCAGCTGCAGTCCTGCCCCAGAATCCCCCCTGAGCTCGGCTGAGGAGTCTGTGAAGAGCCAGCAGGAGGAG[C/T]AGATGTGCCGATCCTCCGTCCAGGAGCCCAGCGAAGCCTCCGAGTCTCAGCCCGGGACGCCGCTGCCGCTGCCTCTGCCGGGACAGGCCGGTCTCAGCATTCAGGAGATGGTGGCCATGTCAGCCGAGCTGGACACGTACGTCATCACGAAAAAAGTCAAAGAAGTCCTCACTGATAACAACCTGGGTGAGTGTGTTAGCAAAACAGAAGATGATCAGTGTATTGTTTTTATTATTGCAAAGAGATATAATTCACAACATCAAGGCAAGACAGGTTTGTTTCAAACGCACTTTTCATACACAAAATGGTCATTCAAAATGCTTTACATAAACAAAAATTAAATAAACAAGGAAATAAAAACGATTAAGAGGATTGAAACGTATTAAAAACATTTAAAATGTGTTAAAACAGGTTATAGAGCAATGAAAAAGAAAAGAAAGACCCAATAGTGCGATCTGTGGGATGTCGCACAGTGCTCATTCAGTAAAATAACAGCTAAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa18988
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000081170 Nonsense 1225 1495 24 26
ENSDART00000136245 Nonsense 140 223 2 5
Genomic Location (Zv9):
Chromosome 10 (position 33867554)
Other Location(s):
Assembly Chromosome Position
GRCz10 10 32968903
GRCz11 10 32912763
KASP Assay ID:
2260-3424.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CACAAGCTCAGCCTGAAGGGTCGCGAGCCGTTCGTGCGCATGCAGCTGTG[G/A]TTGAGCGACCCGCGCAACGTGGAGAAGCTGATGGACATGAAGCGCATGGA
Long Flanking Sequence:
ACTTTGAGTAATATTCACAACAGATACTTTTCCTCTACTTGCACTACATTATTGGGCAAGTAATGGTACTTGTACATGAGTATGATTTTTCAGTACTCTTTCCACCACTGGGAACGCGTTACACCCATCTCTGCTTCAGACTTTCTAAATTTATAATTAAGGGTTTTATCATTTGGATGTTTGTGTCTGTGTGGATACAGTATCATGAAATCATTAATATTTGCAAACTATATTGAATAAAAGTCATGGTGATGTTCAATTAGTCAGTTCATTCAAATCAAATTCAAGTGACGCACAATGTAAATCTGATCTGTAACTTGCCTATGTGAAGGTTTCTAGCTGAATATGTTTGTTTGTGTTTGCTCCACAGGCCAGCGTCTGTTCGGGGAGAGCATTCTGGGTTTGACGCAGGGCTCAGTGTCTGATCTGCTGGCTCGACCCAAACCCTGGCACAAGCTCAGCCTGAAGGGTCGCGAGCCGTTCGTGCGCATGCAGCTGTG[G/A]TTGAGCGACCCGCGCAACGTGGAGAAGCTGATGGACATGAAGCGCATGGAGAAGAAAGGTAATCTCTCTTCTGAAGGCGTCTGCCGCACAGCAACACAAACACCTGCTTGCAATTGTCTGCGTTGTTCCACAGCGTTGTTATTTCAGTGTTTATTAAAGCGCTTCACAGTTTGTTCAGTGCCGGGTTCGTTGGCAGGTCTTTTCGGGACTTTTGAAAGACGGCTGTCTGGGGTGGTATTTTATTTGTTTTTCTTCTCTTGATGTTGGTGCAGCCGTTTGCTCGAATCTGTGTGAATGTTTGGGTCGAGTTTAGTTTGTGCCAATTCTGAATTCATGTTTTTAACTCTTCGATACTACTTTTGATACTAGGAATGTCAATGATTAAAGGGATAGGTGACCCAAAAGTGAATTTCTGTCATTTTTACACACATTTGTTCTAAACTTATTGAGATTTTTTTCTTTTGTTAAACACAAAAGAAGATGTTTTGGAAAATGCTGGC
Associated Phenotype:
Not determined