Busch Lab

ZMP

sf3b1

Ensembl ID:
ENSDARG00000056138
ZFIN ID:
ZDB-GENE-040827-3
Description:
Splicing factor 3b subunit 1, 155kDa [Source:UniProtKB/TrEMBL;Acc:Q6DRD6]
Human Orthologue:
SF3B1
Human Description:
splicing factor 3b, subunit 1, 155kDa [Source:HGNC Symbol;Acc:10768]
Mouse Orthologue:
Sf3b1
Mouse Description:
splicing factor 3b, subunit 1 Gene [Source:MGI Symbol;Acc:MGI:1932339]

Alleles

There are 5 alleles of this gene:

Allele Name Consequence Status Availability
sa21516 Nonsense Available for shipment Available now
sa31725 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa21516
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000078568 Nonsense 466 1291 10 25
ENSDART00000129140 Nonsense 466 1315 10 25

The following transcripts of ENSDARG00000056138 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 9 (position 33203582)
Other Location(s):
Assembly Chromosome Position
GRCz10 9 32359528
GRCz11 9 32170274
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTGGAGGCATGACTGGCTTCCATATGCAAACAGAAGACCGATCGATGAAA[C/T]AAGTTAACGACCAGCCATCCGGAAACCTGCCCTTCCTCAAGCCAGATGAC
Long Flanking Sequence:
CCTGGAAAAACCCCTCTGGGTACACCTGCTATGAATATGGCCACGCCCACTCCAGGTACATGACCAGTGCTGTTGTTTAGCTTAGTTTAGTTTGTAATTTAAATAATTGTTGTTTTGTGGAAGTTGCTTTAAAGGTTTAAATGTTTGCAGGTCACCTGATGAGCATGACTCCAGAACAGCTGCAGGCTTGGCGGTGGGAGCGGGAGATTGATGAAAGGAACCGTCCATTGACTGATGAGGAACTTGATGCAATGTTTCCAGAGGGATACAAAGTATGTGTTATAAAAGTATCATATTATGAAAATCTACAGAGCACATTTGAACTGGATGTACTGAAATTGTGTGTCTGACTGGATTTATTTTGTGTGCTCCGCTAGGTTCTGCCCCCTCCAGCAGGCTATGTGCCCATCCGTACCCCTGCACGTAAATTAGCTGCTACTCCAACCCCTATTGGAGGCATGACTGGCTTCCATATGCAAACAGAAGACCGATCGATGAAA[C/T]AAGTTAACGACCAGCCATCCGGAAACCTGCCCTTCCTCAAGCCAGATGACATTCAGTACTTTGACAAACTGCTGGTGAGTGCCATGTTCATACGGGATCTCAGGGTTATGGAAAAAATATATTCATTGAAATTTTTATTTTTCAAATGTATTATTAATAGTAATAGTTTTGTAATTGGAAGGTATATAATTTTATAATATCTCTGTTTGCAGGTCGAAGTTGATGAGTCCACGCTTAGTCCAGAAGAACAGAAGGAGCGCAAGATCATGAAGCTGCTCCTGAAGATAAAAAATGGAACACCTCCCATGAGAAAGGTTAGCATCATCCCTAACACTCGAGTGTAAAAATTTTGCTTAAAGTATCTCTAACCAATCTGTCTCCTTTCAGGCTGCTCTTCGTCAAATCACAGATAAGGCCAGGGAGTTTGGTGCAGGACCCCTCTTCAACCAGATCTTGCCACTGCTAATGTCTCCTACACTGGAGGACCAGGAGCGCCATCT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa31725
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000078568 Nonsense 997 1291 20 25
ENSDART00000129140 Nonsense 997 1315 20 25

The following transcripts of ENSDARG00000056138 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 9 (position 33201039)
Other Location(s):
Assembly Chromosome Position
GRCz10 9 32356985
GRCz11 9 32167731
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTTATGGGCCATTTGGGTGTGGTGTTGTATGAGTACCTGGGAGAAGAATA[T/A]CCTGAAGTGCTGGGTAGCATTCTTGGAGCCCTGAAAGCCATCGTCAATGT
Long Flanking Sequence:
TTGGTGCCGCTGACATTGATCACAAACTGGAGGAGCAGCTTATTGATGGTATCCTGTACGCCTTCCAGGAACAAACCACTGAGGTGAGTAACAGACTTGCCTGAATTTAAATGATTGCTTTTCTCTTTTTCCTTAATGCCATAATCTCTTCTCAATCTCCAGGACTCTGTGATGCTGAATGGTTTTGGTACGGTGGTAAATGCTCTGGGTAAGAGAGTTAAACCGTACTTGCCTCAGATCTGCGGTACAGTTCTGTGGCGTCTCAACAACAAATCTGCCAAAGTCCGTCAACAGGCTGCTGACCTGATCTCTCGCACAGCGGTGGTTATGAAGACATGCCAAGAGGTAGGGATGACCATTTGAGATTTTGTGAACTGGAAAATTTTATGGGTTAAATAGTAAGTTGCTTACTGATAAATTTCTTGCTCTTATATTTCACTCTAGGAAAAGCTTATGGGCCATTTGGGTGTGGTGTTGTATGAGTACCTGGGAGAAGAATA[T/A]CCTGAAGTGCTGGGTAGCATTCTTGGAGCCCTGAAAGCCATCGTCAATGTCATTGGTGGGTGTTTGCTAATTTACTAAAAGTGGAGCTTGCTAATATAAACCATTATAAGGGATATAAACAAAAACAATGGTCCTAACATATTTCCTGTTTTACATTTTTAATTTTCTATAGCTTTCCAGAATCCAAAAAGAGCCACATATTGATATTGTTATGATAGCTGTTTTATTAATAATTTATGATTGAATTGCCTCTTGTTACAGTTATGAAATAATTTGGTAACAAGAAGAAAATGTTCATGGCCCAATGACATGACCACATTGAAATGGTCTATATAGATGTAATATTAAATGTTCTCTTGTATTGTATTTTTTGTTCACACATTTGTTTGTGAAAAATATACTGCCAAAAGAAAAATATACTGCCAAAAAAAGTTGGTAAATCTATCAAGCTTATGAATGAATTTTGATTTTGAATATTTATTTATTTATTTTGGTTTGTT
Associated Phenotype:
Not determined