ZMP
cops4
Ensembl ID:
ZFIN ID:
Description:
COP9 signalosome complex subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q6P0H6]
Human Orthologue:
COPS4
Human Description:
COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis) [Source:HGNC Symbol;Acc:16702]
Mouse Orthologue:
Cops4
Mouse Description:
COP9 (constitutive photomorphogenic) homolog, subunit 4 (Arabidopsis thaliana) Gene [Source:MGI Symb
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa215 | Nonsense | Available for shipment | Available now |
| sa27571 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa215
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000064215 | Nonsense | 184 | 406 | 5 | 10 |
Genomic Location (Zv9):
Chromosome 10 (position 11326169)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 10 | 11402035 |
| GRCz11 | 10 | 11360273 |
KASP Assay ID:
554-0119.1 (used for ordering genotyping assays)
KASP Sequence:
ACATCAACCGAGCGTCKTTATTGCAGAATGAATCCACCAATGAACAGTTG[C/T]AGATTCACTACAAGGTGATCTTTCAGCTCTRTCTTTTTATAATATGCTAT
Long Flanking Sequence:
AGGATGTTTTCTTATGGCCCGTTTCCACTGAGGGGTATGCTAAGGGACACCTTTATCAGGCTTGCGTTTCCACTGCCAAAAGGGTACCAATGGTACCTTTTTGGTATGTGTGGTGTACGACAGAAAGTTACAGTCGACGTCTCACTCTTTCAGGTGGCATCCATCAGACAGCATTTAGCCACAATCTATGAGAAGCAGGAGGACTGGAGGAACGCTGCACAGGTTCTTGTGGGGATCCCACTGGAGACGGGTCAAAAGTAAGCTTGCTTTTCTCTTGGATTAAACCAATGCAGCCAACATGTCGCCCAGTACTGCTGGTCGTGAGTTTGGATTTTCTAATCATGTTTTTCTGCTTCTACAGACAGTATAATGTGGACTACAAATTAGACACTTACCTGAAAATTGCTCGTCTGTATTTGGAGGATGACGACCCGGTTCAGGCCGAGGCCTACATCAACCGAGCGTCTTTATTGCAGAATGAATCCACCAATGAACAGTTG[C/T]AGATTCACTACAAGGTGATCTTTCAGCTCTGTCTTTTTATAATATGCTATGTATACTGTACTGCCGGGCAGTAGTTCCAAAATAGACATTTCTGATTTTGGTGTGACTTTTTTGTGAAACAATTTATTTGAGCAGTTGCTTTTCTGAGTTCTGTTCAAATTTTTTATGTGCGTTATACAGTATTTATTGTGATAAGTCTTATTACCATTTACAGTTATAAATAATTCTTTATTTTTTGCATCCTTTCAACATATAATATACAACTTCATGTATTTTTAATGTGTTTTTATTTAATAAAAATATGTAAATATGAATGTAGTAATACAAATATAAGTTTGTTCATATTTATGACTGGATGTAGTTTTGGGGTTTTACTAATACACAAAGAAAACGGTCAATTTGTTTCATTTTTGCCATTGCATTCTGTGTTTATATACAGTTGAAGTCAGAATTATTAGCCCCCCTGTTTATTTTTTCCCCAATTTCTGTTTTAACAGAGA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa27571
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000064215 | Nonsense | 271 | 406 | 7 | 10 |
Genomic Location (Zv9):
Chromosome 10 (position 11328199)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 10 | 11404065 |
| GRCz11 | 10 | 11362303 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GATGTCAGCAGCTCGCCGCCTACGGCATCCTAGAGAAAATGTACCTGGAT[C/T]GAATCATCCGAGGAAACCAACTGCAAGAGTTTGCTGCCATGCTGATGCCA
Long Flanking Sequence:
GAACTGTGAATGGAGATGTTTCGCAAATGTAGTGTAAACACCAGTATAAACGAGGATCATTTTCAGAAAAGAAAAACAAAACAAAACAAAACACTGTGTTAAATCAAGTGACTAGTAAAAACCAGTGTAAAGAATCTGTTTGGATTGCCTAATTAGTTTTTAGAGCTAGTAGACCCAAAAATAAAAACTTCCACACTATTTGCTCAACTCAAATTTCACACAAAACAAGATATTCTGACATTTATAGTAGGAACAGAAAAAACAAAACTATAAAAGTCAATGGCAGTTGTTTCCAACATTCTTCCCTTGTGTTCAACAGAAGAAAGAATCTCAAACAGGTTTGAAGGATGATTAAATGATGACAGATTGTTCAGTTTTGAGTGAAACTATTAATGTGTTCTTAAGGTCAGCAGCGCTCTCGTATGTTGGCTACTCTCTTCAAGGATGAACGATGTCAGCAGCTCGCCGCCTACGGCATCCTAGAGAAAATGTACCTGGAT[C/T]GAATCATCCGAGGAAACCAACTGCAAGAGTTTGCTGCCATGCTGATGCCACATCAGAAAGCCACCACAGCCGATGGTATTAGATATTACTCCTTAGCCATGGTGTAACTTGGAAGTGGGGGCACACAAAATGGAGGAACAGGTTTTCGATTTAAATGTCATTTCCAGCATTTACATACATATAGAAACTGTGTTGATGCATAATACATGAGAAAATTAGGTTAAGCTAATTTTGTTAAACTAAAAATAAATAAAAAATATGGACTATTTGTGCTTGATCACTATTTTGTAATATTAATTGCATATACAGTTGAAGTCAGAATTATTAGCCCCCCTTTGATTTTTTTTTTCTTTTTTAAATATTTCCTAAATGATGTTTAACAGAGCAAGAAAAATGTCTGATAATATATATATATATATATTTTTTCTGGAGAAAGTCTTATTTGTTTTATTTAATCTAGAATAAAAGCAGTTTTAATTTTTTTAAACCTATTTTAAGGA
Associated Phenotype:
Not determined