ZMP

si:dkey-174k18.6

Ensembl ID:

ENSDARG00000078643

ZFIN ID:

ZDB-GENE-070912-388

Human Orthologue:

VTCN1

Human Description:

V-set domain containing T cell activation inhibitor 1 [Source:HGNC Symbol;Acc:28873]

Mouse Orthologue:

Vtcn1

Mouse Description:

V-set domain containing T cell activation inhibitor 1 Gene [Source:MGI Symbol;Acc:MGI:3039619]

Alleles

There are 3 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa21461	Nonsense	Available for shipment	Available now
sa21462	Nonsense	Available for shipment	Available now

Mutation Details

Allele Name:

sa21461

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC
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Mutation:

C > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000109680	Nonsense	111	273	3	5
ENSDART00000142220	Nonsense	111	237	3	4

Genomic Location (Zv9):

Chromosome 9 (position 21554549)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	9	20710335
GRCz11	9	20521204

KASP Assay ID:

2260-1714.1 (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

TCAGACACAGAACGCACAGTTCAGCAACAGGGCTCAACTGTTCCCAGACT[C/A]AATTTCAACAGGGAACGCTTCCCTGCTGCTGAGAAACATAAAGCTGGAGG

Long Flanking Sequence:

TTTTAATTCTTTCCTGTTGTCCCTTTACAAATCGATTGTTTGGAGCCCAACATTTTTTACACTATGTATAATACATTTTCAATTAGATGATTTAATCAAAACAAAAAATAAGACCAAATTGTGTGTATTCCTTAAGAGTTTGTGCTGTAAAAGTAAGAATTGTTCCTTAAACTAAAGTGTTATCAAACTTTCATAGAGTTTGTGTGATTATAAATCTTTTGGACTGTAATTAAAACTAATTATCTATGTGTTTGTTTGTTTCCAAGTGTCCCAAGGCACCGTTGAGAGCATTAGTCCAACTACTGTGGGAAATCTTGATGATGATGTGATGCTGGGTTGCAGGTTTCTTAGTAACACAGGCAATGGACAGTTTAGTGATGTGTCAATTACTTGGCTGAAAGATTCCGTCAGTGGTGTGGTTTATGAATACAAGAACAAAGCAGCCCAGCTTCAGACACAGAACGCACAGTTCAGCAACAGGGCTCAACTGTTCCCAGACT[C/A]AATTTCAACAGGGAACGCTTCCCTGCTGCTGAGAAACATAAAGCTGGAGGATGACGGCGTGTATCGCTGCACTGTCAATGCAGCAAAAGTCTCCGGAACTGCCATTGTTACACTCAGAGTAGCTGGTAAATACTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCTTTCTTTCTTTCAAAGCATATACTGTTTAAAATAGCATTTTTCTGGTTTATTTTTTATGTATACCATTAATCCTTTTTTGAGTAAGTCATTGAATTATTCACGCAATCTGTTTGTTCAAAACTGATTCAGTCAGAAACATTATAAAATATTATATACAAAATTATAACCCTAAATCAGAAATAGTTGGGATAGTGTGAAAGTCGTAAATAAAAAGGAAAGTAGTGATTTCTAAATTTACTTTGACTTTGTATTTCATTTCTGATAACACAACAAACATTATTTAAAGCAACATAGGCTCATTCTGAAAACGTAGC

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa21462

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC

Mutation:

G > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000109680	Nonsense	174	273	4	5
ENSDART00000142220	Nonsense	174	237	4	4

Genomic Location (Zv9):

Chromosome 9 (position 21556447)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	9	20712233
GRCz11	9	20523102

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

ACATTTACTGAACTGACCAATGGATCTCTGTCTGCCGTGGCAACTAAATG[G/A]TTTCCTCAGCCAGAGGTGAACTGGTACAATCAAAGTGGGCAGATTTTAAA

Long Flanking Sequence:

GGCAGGCCAGTCAAGTACCTGTATTCTTTTCCGCCATAGCCAGGACTTTGTAATGTGTGCAAAATGAGGTTTTTCATTGTCTTGTTTAAACATGCATGGGCGTCCCCCTGGAAAAGAAGACCCCCTATCGGCTACAAAAGCTCCAATTAATGGTGTAATGAAATCACTACTTTCTTATTTATTTGCGTGTCAGGTTTCCTGCGTTTAAACCGTCCTAACTTTTTCTGAATTGTGCTTGTATTAGTCGAAGAATGGTACAGTATGTAAAAAGAGAAATGTGTCTGAAGTCATAAGAGAGTGCGTAAGATGGAAACTTTACTATCCCGTGAGGATTTGTGAATTCCGATTAAAAGATATGAATGATTTCTGTTTGTAGCATAACATGGCAGATATAGGATATCTGTGTATTAACTCAGATCTGTGTGTTTATTTGAAGCTTTTTCAGCTCCCACATTTACTGAACTGACCAATGGATCTCTGTCTGCCGTGGCAACTAAATG[G/A]TTTCCTCAGCCAGAGGTGAACTGGTACAATCAAAGTGGGCAGATTTTAAACAGCAGCACTAGTTTTTTCAACATTGCAGGAATCATACATGTTTCTAGTCTGCTTCAAGACCCAGTAAAGGAGAATGAAACTTACCGATGTCTCATCCAGAACTCTCTTGTGGTCGCTGTCTCAGAAGCAACTGTCACAGGTAAAATAGTCTACAGTGGAAAAAATAAAAACGATGAAACCAATTATTAGGAAGGACTCACCCATATTAATAACATTTACACAGAGCACTGCATATCAAATCAGGTTTGTTTAAAAAAAAGATGTGATGACAGATTGGACACTTTGGACAAACAAACTGGTTGTGACTCATTAACTAGAATGACACATGTAGATCATGAGTTACACAGCACTATGTTTCTGTTATAAACTATTTCTTTATCTTTACTGTTTCTCAGCACACAAAGTGGCGCAGAGCACATACTTCATTTTCAATGCTGCATCTACAAAAA

Associated Phenotype:

Not determined