ZMP
traf1
Ensembl ID:
ZFIN ID:
Description:
TNF receptor-associated factor 1 [Source:RefSeq peptide;Acc:NP_001121853]
Human Orthologue:
TRAF1
Human Description:
TNF receptor-associated factor 1 [Source:HGNC Symbol;Acc:12031]
Mouse Orthologue:
Traf1
Mouse Description:
TNF receptor-associated factor 1 Gene [Source:MGI Symbol;Acc:MGI:101836]
Alleles
There is 1 allele of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa21216 | Essential Splice Site | Available for shipment | Available now |
Mutation Details
Allele Name:
sa21216
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000101174 | Essential Splice Site | 370 | 551 | 7 | 10 |
| ENSDART00000133350 | None | None | 298 | None | 7 |
| ENSDART00000140699 | None | None | 293 | None | 7 |
Genomic Location (Zv9):
Chromosome 8 (position 12940556)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 8 | 12385319 |
| GRCz11 | 8 | 12423024 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TAGAGACCATTGCAACAGCCAGCAGATCATTCAGCATTTGGAAGCTACGG[T/A]AAGTTTCTGATTGATCCCACATTAAGGTTGTTTTTTGTATGTGAACAAAA
Long Flanking Sequence:
AACCAAATCTGACCTCACCTTGACTTTATGTTCTTTTCCCTTTAACTTTTACAATATATGAATTGTTTTAATTCAGGGCAACCCAGACAAAGTAAAAGAACATGAGTCTTGCAGTCATGCGGGTCACCTGCAGCTTCTACTGGACGTGACCAGGGCTCTTCAGCGAACACTGAACTCAGCAACTGAGCGAGTCTACCAGGACAGCCCTGTTTTTCTTGAGCCTGGACCAAATGGCTCTTCACTCGCTCCTCAGGCTGATGGTGACATAGAAACGGATGGAGGAGATCCGGGAGTGAGTGACAAGGCCTTCAGCCTCCACGATGATCAGGTTGAGCTCGCCGCCGGCCAGCAGCTGGACGCCCTGCAGCAAAAAGTGCAGGTCATAGAGAACATCATTTCCGCTCTGAACCGAGAGGTAGAGAAGACACAGATCAGTGTGGTGGCAATGAATAGAGACCATTGCAACAGCCAGCAGATCATTCAGCATTTGGAAGCTACGG[T/A]AAGTTTCTGATTGATCCCACATTAAGGTTGTTTTTTGTATGTGAACAAAATCCAGTATTACTTTGTGTTGTGTAATTGAAGCTTTTCAGATAAAACTTTGAAATTCTTATATATAAAGTAATAGAGTCAATTTTCAGATAAACTCTTCTTATAATACTTATTGTGTCATTATTTTAGTGTTCAAAAGGACATCATTTTGTGGATTAGGCCTGAACAATATATCATTTGAGCATCGATATCGCAATGTGTGTATCCTCAATAGTCACATCACAGGATTACATTCATTTATTTATTTTCTTTTTGGCTTAGTCCCTTTATTAATCAGGGGTCGCACAGTGGAATGAACCGCCAACTCATCCAGCATATGTTTTACGGAGCGGCAACCCTGAGAAATCACTGAGAAACACCCATACACTCTCATTCACATACATACACAACGGCCAAATTAGCTTACCCAATTCACCGATAGCGCATGTCTTTGTTATAGTCTTTGGACTTGT
Associated Phenotype:
Not determined