Busch Lab

ZMP

sc:d0413

Ensembl ID:
ENSDARG00000077112
ZFIN ID:
ZDB-GENE-080327-27
Description:
cDNA, clone cssl:d0413 [Source:UniProtKB/TrEMBL;Acc:A8BBH2]
Human Orthologue:
LRRN1
Human Description:
leucine rich repeat neuronal 1 [Source:HGNC Symbol;Acc:20980]
Mouse Orthologue:
Lrrn1
Mouse Description:
leucine rich repeat protein 1, neuronal Gene [Source:MGI Symbol;Acc:MGI:106038]

Alleles

There are 4 alleles of this gene:

Allele Name Consequence Status Availability
sa21203 Nonsense Available for shipment Available now
sa859 Nonsense F2 line generated Not yet available
sa1128 Nonsense F2 line generated Not yet available
sa38670 Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa21203
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000112028 Nonsense 68 735 1 2
Genomic Location (Zv9):
Chromosome 8 (position 9390958)
Other Location(s):
Assembly Chromosome Position
GRCz10 8 8807540
GRCz11 8 8846125
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCAAGCCAAGACTGTTGACTGCAACGAACTCCATTTGAGCAGGATCCCGT[G/A]GAATATCTCAGTTGATACTCAGGTGCTCCTTCTTCAGAGCAACAATATCT
Long Flanking Sequence:
CAATGAAAAGAAAAAAATGTGTTGAGAAAAACTCTTCTTTCCTTTAAACAGCACTAGAGAAATATTTTTAAAAGAATTCAAATTTCACAGGAAAGCTAATAGTTTTGACTTCAACTGTATACCACATCTGAAGTTGCTATTATTGTAATTTGTACTTAGTTGACATCATACAACTGCATGATTTATATATCTTCTTTCTTTTTCATTTTGCAGGGCTGGATGAGAAGATTTCTGTCTTCCATTTCATAGGAATCTTCCCTCATACTGTCAACCACCTACTGGTCGCAGCGCTCTAGAGATACTCAATATGGAGAGAACTGCCATTTCCACTTCACTGCTCACAGTCTGTTTGGTTTTGGCTGTGTGTCGCTGTTCCCTTGCGGTTCCCTTCTGCCCTGCGCAGTGTGTCTGCGAAACCCGTCCATGGTACACTCCTCAGTCGGTCTACCATCAAGCCAAGACTGTTGACTGCAACGAACTCCATTTGAGCAGGATCCCGT[G/A]GAATATCTCAGTTGATACTCAGGTGCTCCTTCTTCAGAGCAACAATATCTCCAGGGGAACCTCACAACTCCAGAGCTTGGTCAACCTCACAGAACTGGATCTCTCCCAAAACCACTTCACACAAATCCATGATGTTGGTTTGAACAACCTAACGCAGCTGGTCACACTTTACCTTGAGGAAAACCAAATTAAAGAGCTGCCTGATATGTGTCTAAAGGATCTAGTCAGCTTAGAGGAGCTATATATTAATCACAATCAGATCTCTTCTATTGGTCCTAATGCCTTCTCAGGCTTGGGAAACCTGTTGAGGCTTCACCTTAACTCCAACAAGCTTGTTGCAATAGACAGCCATTGGTTTGAATCCCTGCCTAACCTTGAGATCCTAATGATAGGAGAAAACCCAATTCTTGGGCTTCAAGACATGAATTTTCACCCCCTCACTAAATTGCACAGTTTGGTTCTCGCTGGAATGGGGCTCAGGGAAATACCTGAGGGAGCTT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa859
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000112028 Nonsense 588 735 2 2
Genomic Location (Zv9):
Chromosome 8 (position 9392553)
Other Location(s):
Assembly Chromosome Position
GRCz10 8 8809135
GRCz11 8 8847720
KASP Assay ID:
554-0762.1 (used for ordering genotyping assays)
KASP Sequence:
AGGCGGGACAACCAAAGTGGCTTAGTGCTACCGTAAAGATCGACAATCCA[C/T]AGATCAGCTACACCGCGATGGTCCCTGTAGATGTCCAAGAGTACAACCTC
Long Flanking Sequence:
AGCATGCCTTTCCTCCGCAGCTCAACGTCACCTTAGGACAGCTTCTAACACTCGATTGCTGGGCCGTGGCAGATCCAGCACCTCAGTTTTACTGGGTGACCCCCACAGGTGACAAAGTCACTTCTGAAGCTGTTTCCCCATCCTCAAACGAGGGTGGAGGAACACCGAAGAAGCACCGGATGCAAGACCAAGGTGCGCTAGAGATCCCGCACATAGAGCCTGAAGATACTGGTCTCTACACATGTGTGGCTTGGAACGCAGAGGGAGCCGATACCCGGAGTGTCTCTGTGTACGTGGATAAGAGAAGCTGGAATGGTGCACACCATTTTGGAGGACATCATGGAGTGGTGAACACCACAGGATCATTGGTAATTCTTGCAAAAACTGTTCATGCCCAGTCTGTCGTGCTCGAATGGAAGATGCACCCATATGCTATTCCTTCCAACCATGAGGCGGGACAACCAAAGTGGCTTAGTGCTACCGTAAAGATCGACAATCCA[C/T]AGATCAGCTACACCGCGATGGTCCCTGTAGATGTCCAAGAGTACAACCTCACCCACCTTCTACCTTCAACAGAGTACCAGGTTTGCCTGACTATGGCCGGCACTGAGCAAACCCAGCACTCCTGCATCAACGTGACTACTAAAGAAGCCAGCTTCGCTGTAGAGATGGTGGCACAGCCGACCAACGTAGCCCTGGCCGCAGTCATGGGCTCAATGTTCGCCATCTGCATCATGGCTCTGTTGGTGTTCTACATGGGACGACGCATGAAGCAGAAATCTTGCCATCACTCACTTAAAAAATACATGCAGCACACCACTTCCATTCCTCTGAATGAACTCTACCCGCCCCTTATTAACCTCTGGGAGAATGAGACGGAAAAAGAGAAAGAAGGTGCCGTTGATCCTCAAAACTCACAGATAGACACTTCAAAAACATATATGTGGTAGCTGCACAACACAAAGTAGACAGAAGAGACATTTCAACAGTATTTATACTGTGTT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa1128
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000112028 Nonsense 613 735 2 2
Genomic Location (Zv9):
Chromosome 8 (position 9392630)
Other Location(s):
Assembly Chromosome Position
GRCz10 8 8809212
GRCz11 8 8847797
KASP Assay ID:
554-1039.1 (used for ordering genotyping assays)
KASP Sequence:
GTAGATGTCCAAGAGTACAACCTCACCCACCTTCTACCTTCAACAGAGTA[C/A]CAGGTTTGCCTGACTATGGCCGGCACTGAGCAAACCCAGCACTCCTGCAT
Long Flanking Sequence:
GCACCTCAGTTTTACTGGGTGACCCCCACAGGTGACAAAGTCACTTCTGAAGCTGTTTCCCCATCCTCAAACGAGGGTGGAGGAACACCGAAGAAGCACCGGATGCAAGACCAAGGTGCGCTAGAGATCCCGCACATAGAGCCTGAAGATACTGGTCTCTACACATGTGTGGCTTGGAACGCAGAGGGAGCCGATACCCGGAGTGTCTCTGTGTACGTGGATAAGAGAAGCTGGAATGGTGCACACCATTTTGGAGGACATCATGGAGTGGTGAACACCACAGGATCATTGGTAATTCTTGCAAAAACTGTTCATGCCCAGTCTGTCGTGCTCGAATGGAAGATGCACCCATATGCTATTCCTTCCAACCATGAGGCGGGACAACCAAAGTGGCTTAGTGCTACCGTAAAGATCGACAATCCACAGATCAGCTACACCGCGATGGTCCCTGTAGATGTCCAAGAGTACAACCTCACCCACCTTCTACCTTCAACAGAGTA[C/A]CAGGTTTGCCTGACTATGGCCGGCACTGAGCAAACCCAGCACTCCTGCATCAACGTGACTACTAAAGAAGCCAGCTTCGCTGTAGAGATGGTGGCACAGCCGACCAACGTAGCCCTGGCCGCAGTCATGGGCTCAATGTTCGCCATCTGCATCATGGCTCTGTTGGTGTTCTACATGGGACGACGCATGAAGCAGAAATCTTGCCATCACTCACTTAAAAAATACATGCAGCACACCACTTCCATTCCTCTGAATGAACTCTACCCGCCCCTTATTAACCTCTGGGAGAATGAGACGGAAAAAGAGAAAGAAGGTGCCGTTGATCCTCAAAACTCACAGATAGACACTTCAAAAACATATATGTGGTAGCTGCACAACACAAAGTAGACAGAAGAGACATTTCAACAGTATTTATACTGTGTTGTACATACATGACAAGTATGTATTATTGATTTGTCATTGTGAAAGATACATGTATTTTTAGATTGTACCCTTCAATG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa38670
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000112028 Nonsense 711 735 2 2
Genomic Location (Zv9):
Chromosome 8 (position 9392922)
Other Location(s):
Assembly Chromosome Position
GRCz10 8 8809504
GRCz11 8 8848089
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CCATTCCTCTGAATGAACTCTACCCGCCCCTTATTAACCTCTGGGAGAAT[G/T]AGACGGAAAAAGAGAAAGAAGGTGCCGTTGATCCTCAAAACTCACAGATA
Long Flanking Sequence:
TAATTCTTGCAAAAACTGTTCATGCCCAGTCTGTCGTGCTCGAATGGAAGATGCACCCATATGCTATTCCTTCCAACCATGAGGCGGGACAACCAAAGTGGCTTAGTGCTACCGTAAAGATCGACAATCCACAGATCAGCTACACCGCGATGGTCCCTGTAGATGTCCAAGAGTACAACCTCACCCACCTTCTACCTTCAACAGAGTACCAGGTTTGCCTGACTATGGCCGGCACTGAGCAAACCCAGCACTCCTGCATCAACGTGACTACTAAAGAAGCCAGCTTCGCTGTAGAGATGGTGGCACAGCCGACCAACGTAGCCCTGGCCGCAGTCATGGGCTCAATGTTCGCCATCTGCATCATGGCTCTGTTGGTGTTCTACATGGGACGACGCATGAAGCAGAAATCTTGCCATCACTCACTTAAAAAATACATGCAGCACACCACTTCCATTCCTCTGAATGAACTCTACCCGCCCCTTATTAACCTCTGGGAGAAT[G/T]AGACGGAAAAAGAGAAAGAAGGTGCCGTTGATCCTCAAAACTCACAGATAGACACTTCAAAAACATATATGTGGTAGCTGCACAACACAAAGTAGACAGAAGAGACATTTCAACAGTATTTATACTGTGTTGTACATACATGACAAGTATGTATTATTGATTTGTCATTGTGAAAGATACATGTATTTTTAGATTGTACCCTTCAATGCCAAGCACACTTGGTTGCAGTTGTGATTGTTAGATGACCAACAAACGTGGGGAACAAAACACATCCTATGCTTTCGCATTGCATTGTAATTTCTGAGACGGTTTAATTCAACGTTAAGCATGCAGATGTGTTAAAAACTCCTATAATTTATTCATTCTATATCAGCACTAAGCAAGCTAATCCACACATCGCACTATTTATATCGCCTCACATATCAAGCGCAGTCACACGATATCAGTTTTTGCATGTACTTTTGCATGATGTTTTGGTGCTAACAGGGTGAGGTTTTTCC
Associated Phenotype:
Not determined