ZMP

lrrc50

Ensembl ID:

ENSDARG00000012030

ZFIN ID:

ZDB-GENE-031114-4

Description:

Leucine-rich repeat-containing protein 50 [Source:UniProtKB/Swiss-Prot;Acc:Q7ZV84]

Human Orthologue:

LRRC50

Human Description:

leucine rich repeat containing 50 [Source:HGNC Symbol;Acc:30539]

Mouse Orthologue:

Lrrc50

Mouse Description:

leucine rich repeat containing 50 Gene [Source:MGI Symbol;Acc:MGI:1915520]

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa20957	Nonsense	Available for shipment	Available now
sa40903	Nonsense	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa20957

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC

Mutation:

T > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000099272	Nonsense	76	548	3	11
ENSDART00000145762	Nonsense	80	562	3	10

Genomic Location (Zv9):

Chromosome 7 (position 30350084)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	7	28742426
GRCz11	7	29013576

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

TGCAAGAAAAACAAACTGTACCTGACACCAAGGCTGAATGACACACTTTA[T/A]CTTCACTTTAAAGGTTTGAAATTGCTTAAACAAAAGAGACTAATTTTGCA

Long Flanking Sequence:

TTTAACTGATAGAGAGGTGTATCTGTTCACATATTTAAAAACTTGCATTATTTACAGTGCTATTTGAAAGTGCGTAGCCAAAGCTGAAGGATATGATTTTTTTCCACAGGAAAATATACAAGAGAAAAAGAGTACTGCAGATAAATATATGTACTCCTTTTACCCATTATTTGACAAAAAGGAAAGAAAAATGTAGTCTTATTTTATAGCTTTTCATGTAAAATGCCTAATGGAGAAATATTTTTCCTTTGAAAGATCTGGATTCTCAGAGTGCAGCTGCTGAAGTGTCAGAGAGTGACATAAAGCCTTCAGGCCCCAGGTGATGAAGTGCAGTTTTTTTAATAGTATCCAAATGACATTTGCTCAGATTCAGTTGCTTGAGAATAAAAAATACTGATTTATGTTTCCTGTATCCTCTTCAGAATTACCAAAGACTTCTTAAGGGAGCACTGCAAGAAAAACAAACTGTACCTGACACCAAGGCTGAATGACACACTTTA[T/A]CTTCACTTTAAAGGTTTGAAATTGCTTAAACAAAAGAGACTAATTTTGCATCTTCATCTTTCTTTTCAACTTTTTTAATGAAACTGTTAATTCTCCATTGTAGGTTTTTCTTGTATAGAGGGTTTGGAAGAATATACTGGCCTGCGCTGCCTATGGCTCGAGTGTAATGGTATTCGAAAGATTGAAAATCTGGAGAATCAGACAGAGCTTCGCTGTCTGTTCCTCCATCAGAATCTCATTCACACTCTGGAAAACCTGGAACCACTCAGCAAGCTTTGCACGCTTAATGTCTCAAACAATTATATCAAGGTCATTGAGAACATTTGTAAGTACTTAACTCATTGTCAAACTTTGGCCCCAGTCTTTCATTCTCATTTATTTACACATTAAGGTTTTGTTTTTCAGCTAGTTTGAGCGACTTGTCCACTCTACAGATCTCTCATAACACACTGGAGAATGTTTGTGACATGGAGGAGCTTTCACACTGTCCATCCATCAGT

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa40903

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

G > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000099272	Nonsense	98	548	4	11
ENSDART00000145762	Nonsense	102	562	4	10

Genomic Location (Zv9):

Chromosome 7 (position 30350239)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	7	28742581
GRCz11	7	29013731

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

TTTTTCTTGTATAGAGGGTTTGGAAGAATATACTGGCCTGCGCTGCCTAT[G/A]GCTCGAGTGTAATGGTATTCGAAAGATTGAAAATCTGGAGAATCAGACAG

Long Flanking Sequence:

CCTTTTACCCATTATTTGACAAAAAGGAAAGAAAAATGTAGTCTTATTTTATAGCTTTTCATGTAAAATGCCTAATGGAGAAATATTTTTCCTTTGAAAGATCTGGATTCTCAGAGTGCAGCTGCTGAAGTGTCAGAGAGTGACATAAAGCCTTCAGGCCCCAGGTGATGAAGTGCAGTTTTTTTAATAGTATCCAAATGACATTTGCTCAGATTCAGTTGCTTGAGAATAAAAAATACTGATTTATGTTTCCTGTATCCTCTTCAGAATTACCAAAGACTTCTTAAGGGAGCACTGCAAGAAAAACAAACTGTACCTGACACCAAGGCTGAATGACACACTTTATCTTCACTTTAAAGGTTTGAAATTGCTTAAACAAAAGAGACTAATTTTGCATCTTCATCTTTCTTTTCAACTTTTTTAATGAAACTGTTAATTCTCCATTGTAGGTTTTTCTTGTATAGAGGGTTTGGAAGAATATACTGGCCTGCGCTGCCTAT[G/A]GCTCGAGTGTAATGGTATTCGAAAGATTGAAAATCTGGAGAATCAGACAGAGCTTCGCTGTCTGTTCCTCCATCAGAATCTCATTCACACTCTGGAAAACCTGGAACCACTCAGCAAGCTTTGCACGCTTAATGTCTCAAACAATTATATCAAGGTCATTGAGAACATTTGTAAGTACTTAACTCATTGTCAAACTTTGGCCCCAGTCTTTCATTCTCATTTATTTACACATTAAGGTTTTGTTTTTCAGCTAGTTTGAGCGACTTGTCCACTCTACAGATCTCTCATAACACACTGGAGAATGTTTGTGACATGGAGGAGCTTTCACACTGTCCATCCATCAGTGTCCTTGATCTGTCCCACAACCGCATCAGTGATCCAGCGCTAGTTAATATTCTAGAGAAAATGCCTGACTTGGTAAATTACAGTGCATTTCTTTCCTCATTTATGCTTTCTTGTAAATTTTGATTAATTTGCTAGTTAATATATGTTTGCTTGAT

Associated Phenotype:

Not determined