Busch Lab

ZMP

mtmr1a

Ensembl ID:
ENSDARG00000056690
ZFIN ID:
ZDB-GENE-050522-518
Description:
myotubularin related protein 1a [Source:RefSeq peptide;Acc:NP_001018557]
Human Orthologue:
MTMR1
Human Description:
myotubularin related protein 1 [Source:HGNC Symbol;Acc:7449]

Alleles

There are 5 alleles of this gene:

Allele Name Consequence Status Availability
sa1365 Nonsense Available for shipment Available now
sa20936 Splice Site, Nonsense Available for shipment Available now
sa20937 Nonsense Available for shipment Available now
sa10980 Nonsense Available for shipment Available now
sa20938 Essential Splice Site Available for shipment Available now

Mutation Details

Allele Name:
sa1365
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000079218 Nonsense 87 683 3 16
ENSDART00000100369 None None 505 None 13
Genomic Location (Zv9):
Chromosome 7 (position 26987242)
Other Location(s):
Assembly Chromosome Position
GRCz10 7 25590181
GRCz11 7 25861374
KASP Assay ID:
554-1277.1 (used for ordering genotyping assays)
KASP Sequence:
GTTTGTCTTGCGGATGATGCTCAGTCTCAGGACTCTGGTGAAGATGGCTG[T/A]CAGTTTGACAGTGATTGTGAACTGCCGTCTCACACTTCGGCAAGTTTCTC
Long Flanking Sequence:
CGAAATAAAATAATACCTAAAAATATCTTGACATTTTTTGTTCAGATTCAGTCTAATCTTTGTCTGTGTGTTTGTATAGTGTTCTCACGTGTTCATGAAAGTGTGTGTTTGTGTGTGTGTTTGTAACTCATGTTTGTCTGATGTTTATGTGTGATCTCCAGGTATCCAAGAGGCCAAATTTCAGGGTAAGGCTCCAGAATCTACCATTAGCACAGATCTACTAGTGTAGTAGTGATGGTTGAGCAGCTGTATGCTTTCTGTTTTCTCTCTGCCTCTTCAAATCACACTTCCTGTCTCTGTGTGAGGATTTGACCTCTTGGCCCTAAAGAGGAGCTAATATTTTCTGCATTCTTTCCCATTCCTTTTTCCAAAACTGATGCTGGAACTTTTTTAACAGTCCTTGTCTTTCTCCTGTGTTTCTTCTTTTCTTCTGCTCCTCATGGGTTCTGTGTTTGTCTTGCGGATGATGCTCAGTCTCAGGACTCTGGTGAAGATGGCTG[T/A]CAGTTTGACAGTGATTGTGAACTGCCGTCTCACACTTCGGCAAGTTTCTCTGGCTTTAAACTTACTCTAACTCTACTCTTTTTTTCTGCTTTACTGCCAACTACCTGGTTTATGATTTAAAAATGTTTTGTGTTTTATGATGCAAAATAGATTTTATGTGATTGATAAAAATGCAATCAGTGGCCACCACCATTTTGAGAGCCTAAAAAATCATATAGAGGCAAAACAAAATTAATTTTTTCTTGATGCTCCTGATGATACATTGAGGTCATATGGAGCAAAGCCAGTCTATGCAAGAAACTAAATATCACAGCAGTTTTACTTTAAAGTAAAGTAGCACGATAAAGTCCTTGAGTGTTCACGACTGTCACATACTGATGTTCTGCACATTTGAGTACAAACTAGTTTTAACAGGAGCCATGGGTGTTAATGTAGTTTTGCTTTTAAACAGTTGAAGACAAAATTATTAATCCTACTGCTAAATTAGTTTCTTTTTTAGA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa20936
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > T
Consequence:
Splice Site, Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000079218 Splice Site, Nonsense 101 683 4 16
ENSDART00000100369 None None 505 None 13
Genomic Location (Zv9):
Chromosome 7 (position 26989141)
Other Location(s):
Assembly Chromosome Position
GRCz10 7 25592080
GRCz11 7 25863273
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGTCCAGCACTTCTCAAAAGAACATTCTGTGTTGTTTTTATGTTTCATAG[C/T]AAGTATTCAGGGATGTACGACGGCCGGCCCCAATGGATGAAGTCCCATTG
Long Flanking Sequence:
AATGAATGGGGTAAGATGGTGGAGGAGACATTGAGGATGAATCCAAAGAATCTTGAACTCTGGGAGTCCTGCAAGAACGCTTGCTTTATTATTTGAGGCATTGCCGAGATGTATGGATGCAGTGCATTAATTAGACCTGTATTAATTCTTTTTCCACTGCACCATGACTTTATATTCTATAATGTACATTATTATTACAAGTTATTATTTGTTGTTTCTAAAACTTGGATAGACGACAAGACTTTTATCAGGTAGAGAACATAATATATACATTATATTTCATTAGTTATTTTGCAGCATACTAGTATTCAGCTTACAGTGCAGTTTAAAGACTTAATTGAATGGGTTAGTTAAACAAGTCACTAGACAACAGAGTTTTTTTTGTTCTGTAGTCGATCAAAAAAAAAAACATTCTTAAAGGGTAATATGTGTGTGTGTGTACATATTATAAGTCCAGCACTTCTCAAAAGAACATTCTGTGTTGTTTTTATGTTTCATAG[C/T]AAGTATTCAGGGATGTACGACGGCCGGCCCCAATGGATGAAGTCCCATTGGTCCCTGGAGAGACAATCAAAACCACCGGTATGTTGGATGAGTCTCTGTGACTCTTGTTTCCTGTTTCTGCTTGTCTGGTGGTGTTGGGTTCCATCTGTTATCTTCTGTCTCTGCAGTTAAAGATGTGATGTATATCTGTCCTTTCACTGGAGCCGTGACCGGCACACTCACTATCACAGACTACAAGCTCTACTTTGTCAGTCTAGAGCGGGTACGGAGCAGAAATCATTCTTTTGTTCTCTTTGTCTATTTTAAGATCAGCATATTGACTTGTGTTTTACTCCATTCATCTTTTTGCAGGATGCACCTTTTATTTTGGATGTGAATCTGGGTGCAATCAGCAGGTTGGAGACTATCAGTGTACAGAGTCTTGGAGAGAATACCAGTGGCATGGAGATCGTCTGCAAGGTCAGAGGCACCACTTTTAATAATAGACAGAGATTATGGTA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa20937
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000079218 Nonsense 107 683 4 16
ENSDART00000100369 None None 505 None 13
Genomic Location (Zv9):
Chromosome 7 (position 26989159)
Other Location(s):
Assembly Chromosome Position
GRCz10 7 25592098
GRCz11 7 25863291
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGAACATTCTGTGTTGTTTTTATGTTTCATAGCAAGTATTCAGGGATGTA[C/T]GACGGCCGGCCCCAATGGATGAAGTCCCATTGGTCCCTGGAGAGACAATC
Long Flanking Sequence:
GTGGAGGAGACATTGAGGATGAATCCAAAGAATCTTGAACTCTGGGAGTCCTGCAAGAACGCTTGCTTTATTATTTGAGGCATTGCCGAGATGTATGGATGCAGTGCATTAATTAGACCTGTATTAATTCTTTTTCCACTGCACCATGACTTTATATTCTATAATGTACATTATTATTACAAGTTATTATTTGTTGTTTCTAAAACTTGGATAGACGACAAGACTTTTATCAGGTAGAGAACATAATATATACATTATATTTCATTAGTTATTTTGCAGCATACTAGTATTCAGCTTACAGTGCAGTTTAAAGACTTAATTGAATGGGTTAGTTAAACAAGTCACTAGACAACAGAGTTTTTTTTGTTCTGTAGTCGATCAAAAAAAAAAACATTCTTAAAGGGTAATATGTGTGTGTGTGTACATATTATAAGTCCAGCACTTCTCAAAAGAACATTCTGTGTTGTTTTTATGTTTCATAGCAAGTATTCAGGGATGTA[C/T]GACGGCCGGCCCCAATGGATGAAGTCCCATTGGTCCCTGGAGAGACAATCAAAACCACCGGTATGTTGGATGAGTCTCTGTGACTCTTGTTTCCTGTTTCTGCTTGTCTGGTGGTGTTGGGTTCCATCTGTTATCTTCTGTCTCTGCAGTTAAAGATGTGATGTATATCTGTCCTTTCACTGGAGCCGTGACCGGCACACTCACTATCACAGACTACAAGCTCTACTTTGTCAGTCTAGAGCGGGTACGGAGCAGAAATCATTCTTTTGTTCTCTTTGTCTATTTTAAGATCAGCATATTGACTTGTGTTTTACTCCATTCATCTTTTTGCAGGATGCACCTTTTATTTTGGATGTGAATCTGGGTGCAATCAGCAGGTTGGAGACTATCAGTGTACAGAGTCTTGGAGAGAATACCAGTGGCATGGAGATCGTCTGCAAGGTCAGAGGCACCACTTTTAATAATAGACAGAGATTATGGTAGATTATATTCAGTGCATA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa10980
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000079218 Nonsense 134 683 5 16
ENSDART00000100369 Nonsense 11 505 2 13
Genomic Location (Zv9):
Chromosome 7 (position 26989331)
Other Location(s):
Assembly Chromosome Position
GRCz10 7 25592270
GRCz11 7 25863463
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TTCCATCTGTTATCTTCTGTCTCTGCAGTTAAAGATGTGATGTATATCTG[T/A]CCTTTCACTGGAGCCGTGACCGGCACACTCACWATCACAGACTACAAGCT
Long Flanking Sequence:
ATTATTACAAGTTATTATTTGTTGTTTCTAAAACTTGGATAGACGACAAGACTTTTATCAGGTAGAGAACATAATATATACATTATATTTCATTAGTTATTTTGCAGCATACTAGTATTCAGCTTACAGTGCAGTTTAAAGACTTAATTGAATGGGTTAGTTAAACAAGTCACTAGACAACAGAGTTTTTTTTGTTCTGTAGTCGATCAAAAAAAAAAACATTCTTAAAGGGTAATATGTGTGTGTGTGTACATATTATAAGTCCAGCACTTCTCAAAAGAACATTCTGTGTTGTTTTTATGTTTCATAGCAAGTATTCAGGGATGTACGACGGCCGGCCCCAATGGATGAAGTCCCATTGGTCCCTGGAGAGACAATCAAAACCACCGGTATGTTGGATGAGTCTCTGTGACTCTTGTTTCCTGTTTCTGCTTGTCTGGTGGTGTTGGGTTCCATCTGTTATCTTCTGTCTCTGCAGTTAAAGATGTGATGTATATCTG[T/A]CCTTTCACTGGAGCCGTGACCGGCACACTCACTATCACAGACTACAAGCTCTACTTTGTCAGTCTAGAGCGGGTACGGAGCAGAAATCATTCTTTTGTTCTCTTTGTCTATTTTAAGATCAGCATATTGACTTGTGTTTTACTCCATTCATCTTTTTGCAGGATGCACCTTTTATTTTGGATGTGAATCTGGGTGCAATCAGCAGGTTGGAGACTATCAGTGTACAGAGTCTTGGAGAGAATACCAGTGGCATGGAGATCGTCTGCAAGGTCAGAGGCACCACTTTTAATAATAGACAGAGATTATGGTAGATTATATTCAGTGCATACTAGGGATTGTAATTTATGGTTCGGTGTAACAACAGCTTTAACCCAAAAATGACTGGAGTGTCAGATGAAGATGTCAGAGATTCAATCAAAGACAGTTTACTGAAGATAGTTTGCAGTTTCATCAGCAGAGTCCGTAGGCTGCTCTGCTTACAATTTCAAAACAACAATTAC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa20938
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000079218 Essential Splice Site 256 683 8 16
ENSDART00000100369 Essential Splice Site 133 505 5 13
Genomic Location (Zv9):
Chromosome 7 (position 26993125)
Other Location(s):
Assembly Chromosome Position
GRCz10 7 25596064
GRCz11 7 25867257
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGAGGATGGATGGAAGGTTTATGATCCAGTGGCCGAGTATAAAAGAATGG[T/A]GAGACATGCACATTGCTGAAAAACAGTAGAGTTGACTGAATACATTGAAT
Long Flanking Sequence:
TAATTCTATAGTGTCATCTACTAACACATTGCTGTAATAATAATGCTGCAACTGAAAACAGAGCCCATAATAAGGCATTCAAATTCATAATCATAATTAAGACCTCACTAAAAGTTCATATAAAATTTGATGAATATATAAGCTATTATAAATATTTATAGTCACACAGTCTCTATATTAACAATCTGTGATCTGTCTCAATAGGATATGAGGAGCCCCAGGTTTGCTTATAAAAAGGAGGAACAGAGTAAACTGGAGATTTTGGAAACGTTGACAAAGTATGCCTTCCCGCTGTCCAATGAGTTGGTATGTCATGAATCCACACAGTGCAGTGATTGGCTGCTAGATCTGTCAGTAATTGACTAATTACTCCAGAGCAGCTGGTTCATGCTTTTTGTTTTTGTTTTTTGTCCAGTCCCTGTTTGCCTTCCAATACAAAGAGCAGTTTCCAGAGGATGGATGGAAGGTTTATGATCCAGTGGCCGAGTATAAAAGAATGG[T/A]GAGACATGCACATTGCTGAAAAACAGTAGAGTTGACTGAATACATTGAATCAGAATAATAATGCTTCATTCTGCTTTCGTGACCTTTACTTTTTATTGTCTCCATACTGTCTGCAGGGTTTACCGAATGAGAGCTGGAGTATCAGTAAGATCAACAGTAATTATGAAGTGTGTGACACTTATCCTGCTCTGCTCGTCACCCCAACCAGTATTAAGGAGGACGAGATTCGACGAGTGGCCTCTTTTAGAGTCAAACACCGTATCCCAGTAAGTAAGAAGAAGTGTGCATCTGTGCTTTTCCACTTTTTTTTTATTTTACACATTCAGTCAAGTGTTGTCAGCACTTCATGTTAATTACACATCTGACAATAAACCCATCTGGGGAAATGAACAGAGCGCAACAGTTGGGTTCTAGAAGTAAAAACATGAATTTTTCTATAAATTGTTGTGAGCTTGAGGTTGTTAATTGATTATAATATGATCATTGAATCCATCTGTTTG
Associated Phenotype:
Not determined