Busch Lab

ZMP

usp40

Ensembl ID:
ENSDARG00000071197
ZFIN ID:
ZDB-GENE-060518-5
Description:
Ubiquitin carboxyl-terminal hydrolase [Source:UniProtKB/TrEMBL;Acc:Q7SYB6]
Human Orthologue:
USP40
Human Description:
ubiquitin specific peptidase 40 [Source:HGNC Symbol;Acc:20069]
Mouse Orthologue:
Usp40
Mouse Description:
ubiquitin specific peptidase 40 Gene [Source:MGI Symbol;Acc:MGI:2443184]

Alleles

There are 4 alleles of this gene:

Allele Name Consequence Status Availability
sa20639 Essential Splice Site Available for shipment Available now
sa20638 Essential Splice Site Available for shipment Available now
sa20637 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa20639
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000105098 Essential Splice Site 179 1263 4 31
Genomic Location (Zv9):
Chromosome 6 (position 9138487)
Other Location(s):
Assembly Chromosome Position
GRCz10 6 8422173
GRCz11 6 8657712
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTGTCAACCAGATTACCTGCAAGGAGTGCAGCTATATTAGCGAGAGACAG[G/A]TCAGAACAGAGCTGTATTTTGATCTCAGCTATACAATTTTAAAAACACTT
Long Flanking Sequence:
TAAATGTATAATTGTTTTCTCTGGTCTTGATCAAACAATCCAAGAGAACTAAAGTACAAGTGTGATCACCTTTAAAGGGGTAGTTTATTCAATGTCTTTCTTCTGTTGAACACAAAAATAAGGTATACCGAAAAAAGCTGAAAACCTGTAACCATTGACTTCCATAGTATTTGTCAGTGGTTACAGGTTTCATGTATTTTCCACCTAATTACCTTTTTTAATGTTCATCAGAAGAATGAAACCCATAAAGGTTTGAAACAAGTAACGAGTTTAGTAAATTGTTTATTTTTGGGTGAACTATCTCTTTAAATTCCAATAAATCTTTCTGTGTTTAGGAAATGGGTCAGCAGGATGTGCAGGAGCTGAACCGGATCTTGTTCAGTGCTCTCGAGAGCTCTTTAGTGGACACTTCGGGCAGCAGCCTCATACACCGGCTGTACCACGGGACGCTTGTCAACCAGATTACCTGCAAGGAGTGCAGCTATATTAGCGAGAGACAG[G/A]TCAGAACAGAGCTGTATTTTGATCTCAGCTATACAATTTTAAAAACACTTTAAAAATAGCATCACAAAAATTGTGTATCAAAAAAAAAGTGTATATTCATAATTTTTTGTTGTTGTTGAGAAAGGCCACATATTAAAATTCTAAATCTTGACACTCTGTCTTATACTTGCGCATTTTCATCATGGAATTTTAATGATCTACATATAAATCTGTATCTGAACCATAATTAGAAGGCTGATACTTTTTCCACACACATATCAACAACAAGTTGTTGACATCATTGATTTTCTTTTTTATTAGTCCCTTTATTAATCAGTGGAATGAACTGCCAACTTATTCAGCATATTTTTTACACCGCAGATGCACAGCTTTAACCCGTCACTGGGAAACATCCATACAAACTCATTCACACACTTACACTATGGCCAAGCTTACCCATTTCACCTATACAGCATGTCTTTGGAGTAAACCGGAGCATCCGGAGGAAACTTATGTGAACA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa20638
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000105098 Essential Splice Site 179 1263 4 31
Genomic Location (Zv9):
Chromosome 6 (position 9138486)
Other Location(s):
Assembly Chromosome Position
GRCz10 6 8422174
GRCz11 6 8657713
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGTCAACCAGATTACCTGCAAGGAGTGCAGCTATATTAGCGAGAGACAGG[T/C]CAGAACAGAGCTGTATTTTGATCTCAGCTATACAATTTTAAAAACACTTT
Long Flanking Sequence:
AAATGTATAATTGTTTTCTCTGGTCTTGATCAAACAATCCAAGAGAACTAAAGTACAAGTGTGATCACCTTTAAAGGGGTAGTTTATTCAATGTCTTTCTTCTGTTGAACACAAAAATAAGGTATACCGAAAAAAGCTGAAAACCTGTAACCATTGACTTCCATAGTATTTGTCAGTGGTTACAGGTTTCATGTATTTTCCACCTAATTACCTTTTTTAATGTTCATCAGAAGAATGAAACCCATAAAGGTTTGAAACAAGTAACGAGTTTAGTAAATTGTTTATTTTTGGGTGAACTATCTCTTTAAATTCCAATAAATCTTTCTGTGTTTAGGAAATGGGTCAGCAGGATGTGCAGGAGCTGAACCGGATCTTGTTCAGTGCTCTCGAGAGCTCTTTAGTGGACACTTCGGGCAGCAGCCTCATACACCGGCTGTACCACGGGACGCTTGTCAACCAGATTACCTGCAAGGAGTGCAGCTATATTAGCGAGAGACAGG[T/C]CAGAACAGAGCTGTATTTTGATCTCAGCTATACAATTTTAAAAACACTTTAAAAATAGCATCACAAAAATTGTGTATCAAAAAAAAAGTGTATATTCATAATTTTTTGTTGTTGTTGAGAAAGGCCACATATTAAAATTCTAAATCTTGACACTCTGTCTTATACTTGCGCATTTTCATCATGGAATTTTAATGATCTACATATAAATCTGTATCTGAACCATAATTAGAAGGCTGATACTTTTTCCACACACATATCAACAACAAGTTGTTGACATCATTGATTTTCTTTTTTATTAGTCCCTTTATTAATCAGTGGAATGAACTGCCAACTTATTCAGCATATTTTTTACACCGCAGATGCACAGCTTTAACCCGTCACTGGGAAACATCCATACAAACTCATTCACACACTTACACTATGGCCAAGCTTACCCATTTCACCTATACAGCATGTCTTTGGAGTAAACCGGAGCATCCGGAGGAAACTTATGTGAACAC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa20637
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000105098 Nonsense 935 1263 22 31
Genomic Location (Zv9):
Chromosome 6 (position 9121271)
Other Location(s):
Assembly Chromosome Position
GRCz10 6 8439389
GRCz11 6 8674928
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GTGTTTCTTTCTAAAGGTGAATCGTGGCACTTGAGGAGAGTAGACTGGTG[T/A]GAGGAGATTGGAGAACCACTTATGGATGAGGTGAGAGATTGTAATATAAT
Long Flanking Sequence:
TGTAGTTGGATCAAAAAATACTATGGAAGTCAATGGCTGTTGTTTTCCAACATCCTTCAGCATATCTTCCTTTGTGTAGCTGCAGCAGAACAGATGCAAAGTCAAACAGCTGTGGAACAAGTAGTAAATTCAGTAGATAATCCCTTTAATGTGCCTTCTGACTTTTCTCCATGCAGTTGTTCTTGTACTTCAGTGTTGGTCTAGTGCCCTCTGTAGGCCAGGAGCTGGAGATCATTGTAGAGGAGTCTCTAACCGTCAAAGAGGTAAGCTCTCTGGTCATTTAGGAGAAATTGTACAGCTAATATTAAAGTAAGATGTTAAAAGTTGTGAGTTCTGTTGTTCCAGTGCCTTAAGAAGATGTTGGAGATGACTAGACTGGAAGGTAATATTATAAAATGCTTGATTTTAATGGCACATTTAACTTTGCAGTCTCAGATTTATTCATAAAATGTGTTTCTTTCTAAAGGTGAATCGTGGCACTTGAGGAGAGTAGACTGGTG[T/A]GAGGAGATTGGAGAACCACTTATGGATGAGGTGAGAGATTGTAATATAATACAATAGTAAATAGTGTACAGGATGAGTTTACTGTTATACACTGGACATCAGTAGTTTGTAATAATTAAGTCAGTGTCTTTTGAAGTCTCTTCTCACTACACCTGAGAAAGTGTAATATTGTGAAATTGGGCTTCACGATATTGGAAAAAAAAATAACATTGTGATATTTTGTTTGTTTGCATTATGAATACAATATCAAAAGATGATGTATTAACTCTATTTGGAAAGATTTATTGATTTCAGGATTATTTTGTAAAATAACTTCTGCAAAGAAATACAGTAAACAAATTACAAGTACCGCTGAAAACAATTGAATAAAGATATAAATGAAATTTTTAATAACATTGAAAATAAATAAAATAGCACTGTAGAGTTTTATTGTTTAAATAAATACAATTAGTCTTTGTTAACACTTTGAACTTAATAACTTAGTTTAAATTCACATGAAA
Associated Phenotype:
Not determined