ZMP
si:ch211-1o14.5
Ensembl ID:
ZFIN ID:
Description:
Novel protein similar to vertebrate rho/rac guanine nucleotide exchange factor (GEF) 18 (ARHGEF18) [
Human Orthologue:
RP11-428C6.1
Human Description:
Rho-guanine nucleotide exchange factor [Source:UniProtKB/Swiss-Prot;Acc:Q8N1W1]
Mouse Orthologue:
Rgnef
Mouse Description:
Rho-guanine nucleotide exchange factor Gene [Source:MGI Symbol;Acc:MGI:1346016]
Alleles
There are 8 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa20469 | Nonsense | Available for shipment | Available now |
| sa16048 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa20469
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000085086 | Nonsense | 394 | 944 | 13 | 24 |
| ENSDART00000133170 | Nonsense | 666 | 1326 | 15 | 25 |
Genomic Location (Zv9):
Chromosome 5 (position 36483489)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 5 | 34265438 |
| GRCz11 | 5 | 34865591 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GTTACTTCAAAGAGCTTCAGCAGCAGAACAAGAGATTTCAGCTCTTCATC[A/T]AAGTGAGAGACCCATCAACCAATACTTTATAAGTCGAATATTAATGCATA
Long Flanking Sequence:
AGTGAAACATGCACATCAGATTACAAATTTGCATAATTACAATGCCATTACTGTAACTTTTGATCATCACAGTAAACCATATTGTGTTCAAAGGCACTGTTAGAATAAAACAAGATACCTGCCAACGGGTAACACTATAGCTTGTATTGTGTGTACAAGTTATTGGCATGATTTACATTTCGCATTCTTTTTCAACCCTTAAGACTTATGTGGTGCTTTCATTTTTTAAATTTTTTTTTTGACAGTAAAAAACAAAAGATTCTATTTGATTGATACTGTGTTCTGTAACAGATCTGCCTGTTAGCTTATTTGTCCATGCTAATAAATCACCAATGTGATATAAAAACCTCTCCAACGTGTGTTCGTGTTGATCTCAGTTCTCCCAGGAGAACGCAGAGAAGATGAAGCAGGTGTATGGAGAGTTTTGCAGTCATCACACAGAAGCAGTCAGTTACTTCAAAGAGCTTCAGCAGCAGAACAAGAGATTTCAGCTCTTCATC[A/T]AAGTGAGAGACCCATCAACCAATACTTTATAAGTCGAATATTAATGCATAATAGATGCTTTTGGCAGCACTGAAATTCATTTAACCAATCGCATCTTTTCGGCTCTACAGCAACAGAGTAGTAACTCGCTGGTGAAGAGGCGAGAGATCCCAGAATGTATTTTGTTAGTGACGCAGCGAATTACAAAGTACCCTGTCCTCCTAGAGAGAATACTCCAGTACACAGACGGTAATTTGTCCTTACTGTACAGTAAATGCATGTAAAATCATAACCATACCAGACACATACGTCTATACTTTTTTTTTCTTCTTCAGAGGGCACAGAAGAGCACTCTGACCTCTCTCGAGCTCTAGTCCTGATCCGAGAGCTGATCTCCGCTGTGGACCAATATGTGAGTCAGTATGAGCAGAACCAGAAGCTGAGTGAAGTCTTGGGCCGCATGGAGAACAAGTGCTCTACCAAACTGAAGACCGGCTGCACTTTCCGCAAGCAGGACATCA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa16048
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000085086 | Nonsense | 672 | 944 | 20 | 24 |
| ENSDART00000133170 | Nonsense | 947 | 1326 | 21 | 25 |
Genomic Location (Zv9):
Chromosome 5 (position 36477124)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 5 | 34259073 |
| GRCz11 | 5 | 34859226 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CAGTGATGGCAGGCCAGCGAGAGGCAGGACCAGAGCCCAGGCTGCTGGTA[C/T]GACCCAGCACTGAAGACRTTCCCCAGGCKGGAGTACTACTCAGCGCCGCT
Long Flanking Sequence:
TTTATGGTTTTCTGGGATGTCTAACAGTATTCAAGTAGAGAAATCAATTGTAAAATAACATGGTCATCATTGTATAAAAATGTTTAAAAAACATTTAATAATATCTTTATCTTTTCATCTTTAATAAATAATCTAAATCTGCAATGTTACTGTTGCAGATACACACATTGTGAAATCAATGCTTAAATTCTATATTGTTCAGCCCTAATTCATATATTTTCTTAATCACATGGGATGGAGACAATGCTTTGTTGATTACTGATTTATGTGATATTAGAATTTTGTTCTTTAGATAAAAACGTAGCCGGTAGAGGTACTCCTGTTTTGTTTATACTTTTTAACAAATTGAACATGACATCCATCACTTTTCTTCCACAGAGACGCTGTGTGGCCATGATCACCTCATCTGTTCCAATCTGGAGGAGAAGCTGCACATCTATGCCGAGCTGTCAGTGATGGCAGGCCAGCGAGAGGCAGGACCAGAGCCCAGGCTGCTGGTA[C/T]GACCCAGCACTGAAGACGTTCCCCAGGCTGGAGTACTACTCAGCGCCGCTCTCAGAGAGGGTGAGTCTGCTCATTCGTCATCAGGTGTACATTAATGGATCAAACATAACAGCAAAACATTTGTAATTCTAAAAAAGGCTACAGTTGTAATATTCAAGTGTTGTTTGTCTATTTTTGACAAAAAGAAATTATATTTTTTTAGTTTATTTCAGAATAGTGTTACTTGATAAGAGTGATACAAAATATATAATATAATATAATATAATATAATATAATATAATATAATATAATATAATATAATATAATATAATATAATATAATATAATATAATATAATATACAGTTGAGGTCAGAATTATTAGCCCCCTGTTTTTTCCCCCCCTATTTTTGTTTAACAGAGAGAAGATTTTTTCAAAACATTTCTAAACATAATAGTTCTAATAACTTTGAATAATAAGTCATTTAAGGACTAATTTATTTTATTTTTGCCATAATTACAGT
Associated Phenotype:
Not determined