ZMP
bco2a
Ensembl ID:
ZFIN ID:
Description:
Novel protein similar to beta-carotene oxygenase 2a (Bco2a) [Source:UniProtKB/TrEMBL;Acc:B8JLH3]
Human Orthologue:
BCO2
Human Description:
beta-carotene oxygenase 2 [Source:HGNC Symbol;Acc:18503]
Mouse Orthologue:
Bco2
Mouse Description:
beta-carotene oxygenase 2 Gene [Source:MGI Symbol;Acc:MGI:2177469]
Alleles
There are 4 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa13144 | Nonsense | Available for shipment | Available now |
| sa1284 | Essential Splice Site | F2 line generated | Not yet available |
| sa20447 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa13144
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000078117 | Nonsense | 145 | 535 | 3 | 11 |
| ENSDART00000133981 | Nonsense | 178 | 569 | 4 | 12 |
| ENSDART00000147963 | Nonsense | 180 | 257 | 5 | 7 |
The following transcripts of ENSDARG00000055722 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 5 (position 31704610)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 5 | 29465440 |
| GRCz11 | 5 | 30065593 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GAGCCAACAGATAATGCCAGCGTCAACTTTGTTAAGTACAAGGGGGACTA[T/A]TATGTGAGCACWRAGACAAACTACATGCACAGAGTGGATCCAGAAACTTT
Long Flanking Sequence:
TCAACATTATTTGATGTTATTATTGGACATCAAAATAATATTGTCCTTAGACGCTGGCTAGACATTGAATTTTGGTCACCTGACATCACAACCTAAATCTAACCTAATATTAACGTCTTATGACATTGTGTGGCTGCTAACTAAATGCACTGCAGAATGTTACATTTACACATATTCACAAATTACATGTAAATGCATCAACTATTAAAAGCATAATACTCACTACTCATGAGTACTTTTAAAAGGGATACTTTTCCTTCTATTTGAGTAATATTTACAACTGGTACTTTTACTCTACTAACAGTACATTTTTAGGCATGCAATGCTACTATTACTTAAGTATGCTTTTTCAGTACTCTTTCCACCACTGCTTAAAAGTAATCAAAGTAATACAAAAATTTAAATGAATCAAATGTATTTATGACACTGATTTCCTTCTCTCCAATTCCAGAGCCAACAGATAATGCCAGCGTCAACTTTGTTAAGTACAAGGGGGACTA[T/A]TATGTGAGCACTGAGACAAACTACATGCACAGAGTGGATCCAGAAACTTTGGAGTCCAAACAGAAGGTATGAAGTAAAAACGATTTTTTTTTATGTAAAATCAAATCTTAAGGGTTAGGTCACCCAAAAAATATGTTATTAATTACACCCTCTCATGTCATACCAATTTCCTGAGGTCTTTGATCATTTTCAGTCTCAGGATGTTTAAAATCCTGAAAAGGTACATCATATAAAAATAAATGTATAATGTATGTAACACAAACATAAAAATAAGTAATTTCTACATGGTTTTTTGTGTTCTCAGAGCTTCATACGATTACAGTTGCATGACTTAAGTCACGGAATGTTTTGACAAGGTTTTTGGTTTCTTTTCTGGACTTTAATGGATTTGGATCGTTGTATATGGAGGATGAGAAAGCTATCTGATTTCACCCAAAAAAAAACATAATTTGTGTTCCAAAGAAGAACATTTGTATTAATGGAACAACATGAGGATGAAT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa1284
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000078117 | Essential Splice Site | 245 | 535 | 6 | 11 |
| ENSDART00000133981 | Essential Splice Site | 278 | 569 | 7 | 12 |
| ENSDART00000147963 | None | None | 257 | None | 7 |
The following transcripts of ENSDARG00000055722 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 5 (position 31701418)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 5 | 29462248 |
| GRCz11 | 5 | 30062401 |
KASP Assay ID:
554-1199.1 (used for ordering genotyping assays)
KASP Sequence:
TTMTGAATGTATAGCACTAAAACACATANATTTTATTTCCCTGAACCTTTC[A/T]GGCATGTCAGAGAACTACGTAGTGTTCATCGAGCAGCCTATTATAATGGA
Long Flanking Sequence:
ACGGTGCCACCGCTCATCCACACTTTGATCCAGACGGCACAGCTTACAACATGGGCAACTCCTACAGAAACAAAGGTTAGATTCCTGTCTTTCTCTTTTGCACTAAGCAAATTAAGCATTGTATGAGGTCATGTTCATACTAGGAAATGTTTTCTAGGTGCTATGTACAACATCATCAGAGTCTCTCCAGAAAGAGACGGCCCCAAGGATACGCTAGAGGGAGCCAAAATATTATGCTCTATCGCCCCCCGTGACAAATCCAAACCCTCTTATTACCACAGCTTTGGTGAGTGAATATGAAAATCTGTCCCGTTTATTATCTCCACCTCAACTACACAAGAACGACTATCGTAATAAATTTTTACACTTTTCTGTATGTAATAAAGCCATGCTTTTTTTAACTGCAAGGCACTCTGAATTATATAATCATATTGTCTGAATAGAGTGGTCTTATGAATGTATAGCACTAAAACACATAATTTTATTTCCCTGAACCTTTC[A/T]GGCATGTCAGAGAACTACGTAGTGTTCATCGAGCAGCCTATTATAATGGATCTGTTTAAGATAATAACCGGCAGACTATGGGGCAACTCAATAAATCGGGGTATTTACTGGGACCCCAACCAGGAAACCATTTTTCACCTTATTGACAAACAAACTGGAAAGGTGAGGCAATCTTTTAAGACATTTACAGTAGTATTTCTCAGAGGCATTGAGAATAATGCAGATGATCTCTCTTATGAGTTTATCCATACAGTTTACAGTATATTTGTGCATTGATTGTGCTTTATACGTTTCAGTGAGAGCTGATGAACATAACGATATTATGTGGTTGTATTTGTAATGAAAGTATAGTGATACAGCACTTAATATAGTTGTTAATGAATTATGCATAATACATGTAACAATCCCTAATCCTAACTCGCGTAATATAGTAACTCTAACTCTATAGTATAGTAAGTACAGTGCGCAGCATATATAAGTACACCCCTCACAAATCTCTC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa20447
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000078117 | Nonsense | 381 | 535 | 8 | 11 |
| ENSDART00000133981 | Nonsense | 414 | 569 | 9 | 12 |
| ENSDART00000147963 | None | None | 257 | None | 7 |
The following transcripts of ENSDARG00000055722 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 5 (position 31699783)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 5 | 29460658 |
| GRCz11 | 5 | 30060811 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CCCGTCGTTTTGTTCTGCCGCTCCACATCAGCAGTGAAACACCTCTGGAA[C/T]AGAATCTCAACACTCGTCTTGACAGCACCGCCACTGCCATCTGCCGCACT
Long Flanking Sequence:
ACTTATAAATATTTAATATTACTCGGTAGTTACATAAAGTTATACTGTAACTGCTTCACCCTTTAATAAAGTGTTATGTAATTGACTGCTCTGCCTGTCTGTCTGTGCAGGAGATGCCAGTAAAGTACTACACCAAGGCTCTGTCCACCTTTCATCAGATCAATGCGTTTGAGCAGGACGGTTTCCTCATGTTAGACATGTGCTGCTCTGATGATGGAGAGGCCATAAATAACTTCCTGATCCAGAACATGCGCCAGTCAGGAGAGGCTCTGGATGAGGTGATGTTACTCTCTGTTTGTCCTACAGTAATACTACATTAACTACATTAATACTACTGTATAACAGCAGGTGCCATGTATACTGTTAATATAATTATTATGACATTATTTGTCTAATTTTCTGTGTATATTTTTCTCTCTCAGATGTATAACACAATGAGTCGGCCACTGCCCCGTCGTTTTGTTCTGCCGCTCCACATCAGCAGTGAAACACCTCTGGAA[C/T]AGAATCTCAACACTCGTCTTGACAGCACCGCCACTGCCATCTGCCGCACTAAAACTCAGGTGTCCTCTTTGACTGAGTTACACATGTAGTACATTGTATCATATCCTTTGTTTTTTCTCCGGGTGCTCCGGTTTCCCCCACAAGTCCAAAGATATGCGGTATAGGTGAATTAAGTAAACTAAATTGGCCATAGTATAAGCATGGGTTTTAACCACAGCGGTTCGAACTGTAGTTCTGCCGAGCGACTAAAAAGTTATCAGTATGATGGTAAAAAACTATACATTTCTAGTCACCATTCTTCTGCAATCTCATTACAAAAATGGAAATAAGGGCAGTATTAGTAGCTATAAATGTAGAAGAGCGTTGATATTATGTGATTGTATTTTATTGCAATATGGAACAATTAAATGTTGATGTTAAATCAAAAGTAATTCACAAGTACTTGAAAATGAGATGATTTAATGACAATAATTATCTATGGTCACAACTGAATTAATTAC
Associated Phenotype:
Not determined