Busch Lab

ZMP

tnc

Ensembl ID:
ENSDARG00000021948
ZFIN ID:
ZDB-GENE-980526-104
Description:
tenascin C [Source:RefSeq peptide;Acc:NP_570982]
Human Orthologue:
TNC
Human Description:
tenascin C [Source:HGNC Symbol;Acc:5318]
Mouse Orthologue:
Tnc
Mouse Description:
tenascin C Gene [Source:MGI Symbol;Acc:MGI:101922]

Alleles

There are 10 alleles of this gene:

Allele Name Consequence Status Availability
sa8813 Nonsense Mutation detected in F1 DNA Not yet available
sa40443 Nonsense Mutation detected in F1 DNA Not yet available
hu3513 Nonsense Confirmed mutation in F2 line Not yet available
hu3583 Nonsense Confirmed mutation in F2 line Not yet available
hu3580 Nonsense Confirmed mutation in F2 line Not yet available
sa33618 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa20438 Essential Splice Site Available for shipment Available now
sa1576 Nonsense Available for shipment Available now
sa33617 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa20437 Essential Splice Site Available for shipment Available now

Mutation Details

Allele Name:
sa8813
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000026107 Nonsense 513 1811 2 22
ENSDART00000078607 Nonsense 513 1506 2 22
ENSDART00000131729 Nonsense 513 1811 3 23
ENSDART00000137717 Nonsense 513 1720 2 21

The following transcripts of ENSDARG00000021948 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 5 (position 30241630)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 28003419
GRCz11 5 28603572
KASP Assay ID:
2259-5902.1 (used for ordering genotyping assays)
KASP Sequence:
GAGAAGACTGCAGTATCAAAACCTGCCCTAATCACTGCCATGGACAGGGA[C/T]AGTKTATAGATGGTAAATGCRTTTGTCATGACGGCTTTGCTGGAGAAGAT
Long Flanking Sequence:
AGCTAACATGTCTCAATGACTGCAGTGAGAGAGGTCACTGCTTTAATGGCAAGTGTATATGTGACCCTGGATTCGAGGGCGAGGACTGTAGCCTTCTCTCCTGCCCAGACAACTGCAATGGCCGAGGACATTGTGTCAACGGTGAGTGTATTTGTGGTCCTGGATATGAAGGTGATGACTGCTCAGAGCTTTCCTGTCTCAATAACTGCCACGATCGTGGTCGATGTGTCAACGGGAAGTGCATATGCAAAGCAGGTTTTGCTGGAGAAGATTGCAGCATCAAGACCTGTCCACATGACTGCCATGGACGTGGAGAGTGTGTAGATGGCAAGTGTGTTTGCCATGATGGATTTGCTGGAGAACACTGTGGCATCAAGACCTGCCCCCATCACTGCCATGGACATGGACAATGTGTGGACGGCAAGTGCATTTGCCACAAAGGCTTTGCTGGAGAAGACTGCAGTATCAAAACCTGCCCTAATCACTGCCATGGACAGGGA[C/T]AGTGTATAGATGGTAAATGCATTTGTCATGACGGCTTTGCTGGAGAAGATTGCAGCATCAAAACCTGCCCTAATCACTGCCATGGACGTGGACGTTGCGTTGATGGCAAATGCATTTGCCATGATGGTTTTGCTGGAGAAGACTGCAACATCAAGACTTGTCCCAATGACTGTCATGATCATGGAGAGTGTGTGGATGGCAAGTGCATTTGCCATGCTGGCTTCACAGGCCACGACTGCAGTGAGTTGACTTGCCCCAATGACTGCCATAACCGAGGACGTTGTGTAAATGGGCAATGTGTGTGTAACATCGGGTTCACTGGGGAGGACTGTGGTACAAAGACATGTCCCAACAACTGTCTGGACCGTGGCTTCTGCGAAGATGGAAAGTGTGTCTGCTTTGAGGGCTACACCGGTGAGGATTGCTCTGTACTGACCTGCCCTGCAGACTGCAATGACCAAGGCCAGTGTCTGAATGGAATGTGCATATGTGATCTGGGC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa40443
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000026107 Nonsense 549 1811 2 22
ENSDART00000078607 None None 1506 None 22
ENSDART00000131729 Nonsense 549 1811 3 23
ENSDART00000137717 Nonsense 549 1720 2 21

The following transcripts of ENSDARG00000021948 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 5 (position 30241522)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 28003311
GRCz11 5 28603464
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCAAAACCTGCCCTAATCACTGCCATGGACGTGGACGTTGCGTTGATGGC[A/T]AATGCATTTGCCATGATGGTTTTGCTGGAGAAGACTGCAACATCAAGACT
Long Flanking Sequence:
ACAACTGCAATGGCCGAGGACATTGTGTCAACGGTGAGTGTATTTGTGGTCCTGGATATGAAGGTGATGACTGCTCAGAGCTTTCCTGTCTCAATAACTGCCACGATCGTGGTCGATGTGTCAACGGGAAGTGCATATGCAAAGCAGGTTTTGCTGGAGAAGATTGCAGCATCAAGACCTGTCCACATGACTGCCATGGACGTGGAGAGTGTGTAGATGGCAAGTGTGTTTGCCATGATGGATTTGCTGGAGAACACTGTGGCATCAAGACCTGCCCCCATCACTGCCATGGACATGGACAATGTGTGGACGGCAAGTGCATTTGCCACAAAGGCTTTGCTGGAGAAGACTGCAGTATCAAAACCTGCCCTAATCACTGCCATGGACAGGGACAGTGTATAGATGGTAAATGCATTTGTCATGACGGCTTTGCTGGAGAAGATTGCAGCATCAAAACCTGCCCTAATCACTGCCATGGACGTGGACGTTGCGTTGATGGC[A/T]AATGCATTTGCCATGATGGTTTTGCTGGAGAAGACTGCAACATCAAGACTTGTCCCAATGACTGTCATGATCATGGAGAGTGTGTGGATGGCAAGTGCATTTGCCATGCTGGCTTCACAGGCCACGACTGCAGTGAGTTGACTTGCCCCAATGACTGCCATAACCGAGGACGTTGTGTAAATGGGCAATGTGTGTGTAACATCGGGTTCACTGGGGAGGACTGTGGTACAAAGACATGTCCCAACAACTGTCTGGACCGTGGCTTCTGCGAAGATGGAAAGTGTGTCTGCTTTGAGGGCTACACCGGTGAGGATTGCTCTGTACTGACCTGCCCTGCAGACTGCAATGACCAAGGCCAGTGTCTGAATGGAATGTGCATATGTGATCTGGGCTTTACTGGCGATGACTGCTCTGAGAGTAAGTGCCTATATTTACACCTACATGTTTCTGATTGAACCAGTGTTGTTATGTCAGGAAATGTGTTGATATCACTAAAGAGC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
hu3513
Status:
Confirmed mutation in F2 line
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > G
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000026107 Nonsense 721 1811 3 22
ENSDART00000078607 Nonsense 684 1506 4 22
ENSDART00000131729 Nonsense 721 1811 4 23
ENSDART00000137717 Nonsense 721 1720 3 21

The following transcripts of ENSDARG00000021948 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 5 (position 30239776)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 28001565
GRCz11 5 28601718
KASP Assay ID:
554-0397.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GACGTCGCCTGGGTTAATGAGATGCTTGTGACAGAGTATCTTATCACCTA[T/A]GTACCTACGGCTCCTGGAGGTTTGGAGATGGAAATGAGAGTATCTGGTGA
Long Flanking Sequence:
TACCGTTTGAATGCAAATCCACTGACTTTGGTGGAGTTTTGCAGCTACCAAAGCAGAAACAAAAGCTTCTGATCACTACATAATTTTCATTCAACTGTAATTTTGCTACCTTATTACAGAATACTAGAAAAGCAGATGAGAAAAAGTCCCATAAACACACAAGTCTATAGACTCTCCTCACAAAGAAATCAGGAAAGTATTCAAAAGTAAGCAAAAGTGACAATTTATAACACCAAATGTGGACATGAATGTGTCATCTAAAATCAGGTACCTTAACCAAATCACCAAATTGCCCCTTGACAATAAGCTAGATAAAGAGAAATAAGATAAAGTATTTCTCTCTTTCAAGAACTGATATTGAGTTATTTTTGTGACTAATTTGTCTTGTTTTAATCCACAGTCTCCCCACCCAGAGACCTTACTGTGACTGAGGTCGACCCAGAAACAGTGGACGTCGCCTGGGTTAATGAGATGCTTGTGACAGAGTATCTTATCACCTA[T/G]GTACCTACGGCTCCTGGAGGTTTGGAGATGGAAATGAGAGTATCTGGTGAAAAGAAGACAGCTACTATTAGGGAGCTAGAGCCTGGCATAGAGTACCTAATCAGTGTCTTTGCAGTTCTCAACAGCAAGATGAGCGTCCCTGTCAGTGCCAGAATAGCCACACGTGAGTCACCAATATCCTTCAATGCTTGTTATTTTGTCCTGAATATATTCTGATGCACTGCTCCATATCTTACAATCAGATCTTCCTGAACCTGAGGGCCTGAAATTCAAATCCGTGAAAGAGACTTCAGTGGAGGTTGAGTGGGACCCCTTGAACATCCCGTTTGATGGCTGGAATCTGATCTTCAGAAACACAGTGAGTGTCCTGGCATCGCCTGTGAGTCTCTAGAGTGGCTGCAATCCAGAAGTTTATCACTTGCTCTCATATTTTTCTTCTAAAATATGTAATATAAAAGGACCGTTCTGTTTTCAAGCAATAGTAAAAATTGAGAATCTCC
Associated Phenotype:
Normal
Stage Entity Quality Tag
Larval:Day 5
ZFS:0000037		 whole organism
ZFA:0001094		 quality
PATO:0000001		 normal
PATO:0000461

Mutation Details

Allele Name:
hu3583
Status:
Confirmed mutation in F2 line
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000026107 Nonsense 721 1811 3 22
ENSDART00000078607 Nonsense 684 1506 4 22
ENSDART00000131729 Nonsense 721 1811 4 23
ENSDART00000137717 Nonsense 721 1720 3 21

The following transcripts of ENSDARG00000021948 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 5 (position 30239776)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 28001565
GRCz11 5 28601718
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GACGTCGCCTGGGTTAATGAGATGCTTGTGACAGAGTATCTTATCACCTA[T/A]GTACCTACGGCTCCTGGAGGTTTGGAGATGGAAATGAGAGTATCTGGTGA
Long Flanking Sequence:
TACCGTTTGAATGCAAATCCACTGACTTTGGTGGAGTTTTGCAGCTACCAAAGCAGAAACAAAAGCTTCTGATCACTACATAATTTTCATTCAACTGTAATTTTGCTACCTTATTACAGAATACTAGAAAAGCAGATGAGAAAAAGTCCCATAAACACACAAGTCTATAGACTCTCCTCACAAAGAAATCAGGAAAGTATTCAAAAGTAAGCAAAAGTGACAATTTATAACACCAAATGTGGACATGAATGTGTCATCTAAAATCAGGTACCTTAACCAAATCACCAAATTGCCCCTTGACAATAAGCTAGATAAAGAGAAATAAGATAAAGTATTTCTCTCTTTCAAGAACTGATATTGAGTTATTTTTGTGACTAATTTGTCTTGTTTTAATCCACAGTCTCCCCACCCAGAGACCTTACTGTGACTGAGGTCGACCCAGAAACAGTGGACGTCGCCTGGGTTAATGAGATGCTTGTGACAGAGTATCTTATCACCTA[T/A]GTACCTACGGCTCCTGGAGGTTTGGAGATGGAAATGAGAGTATCTGGTGAAAAGAAGACAGCTACTATTAGGGAGCTAGAGCCTGGCATAGAGTACCTAATCAGTGTCTTTGCAGTTCTCAACAGCAAGATGAGCGTCCCTGTCAGTGCCAGAATAGCCACACGTGAGTCACCAATATCCTTCAATGCTTGTTATTTTGTCCTGAATATATTCTGATGCACTGCTCCATATCTTACAATCAGATCTTCCTGAACCTGAGGGCCTGAAATTCAAATCCGTGAAAGAGACTTCAGTGGAGGTTGAGTGGGACCCCTTGAACATCCCGTTTGATGGCTGGAATCTGATCTTCAGAAACACAGTGAGTGTCCTGGCATCGCCTGTGAGTCTCTAGAGTGGCTGCAATCCAGAAGTTTATCACTTGCTCTCATATTTTTCTTCTAAAATATGTAATATAAAAGGACCGTTCTGTTTTCAAGCAATAGTAAAAATTGAGAATCTCC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
hu3580
Status:
Confirmed mutation in F2 line
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000026107 Nonsense 800 1811 4 22
ENSDART00000078607 Nonsense 763 1506 5 22
ENSDART00000131729 Nonsense 800 1811 5 23
ENSDART00000137717 Nonsense 800 1720 4 21

The following transcripts of ENSDARG00000021948 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 5 (position 30239461)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 28001250
GRCz11 5 28601403
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GAAATTCAAATCCGTGAAAGAGACTTCAGTGGAGGTTGAGTGGGACCCCT[T/A]GAACATCCCGTTTGATGGCTGGAATCTGATCTTCAGAAACACAGTGAGTG
Long Flanking Sequence:
AGAGAAATAAGATAAAGTATTTCTCTCTTTCAAGAACTGATATTGAGTTATTTTTGTGACTAATTTGTCTTGTTTTAATCCACAGTCTCCCCACCCAGAGACCTTACTGTGACTGAGGTCGACCCAGAAACAGTGGACGTCGCCTGGGTTAATGAGATGCTTGTGACAGAGTATCTTATCACCTATGTACCTACGGCTCCTGGAGGTTTGGAGATGGAAATGAGAGTATCTGGTGAAAAGAAGACAGCTACTATTAGGGAGCTAGAGCCTGGCATAGAGTACCTAATCAGTGTCTTTGCAGTTCTCAACAGCAAGATGAGCGTCCCTGTCAGTGCCAGAATAGCCACACGTGAGTCACCAATATCCTTCAATGCTTGTTATTTTGTCCTGAATATATTCTGATGCACTGCTCCATATCTTACAATCAGATCTTCCTGAACCTGAGGGCCTGAAATTCAAATCCGTGAAAGAGACTTCAGTGGAGGTTGAGTGGGACCCCT[T/A]GAACATCCCGTTTGATGGCTGGAATCTGATCTTCAGAAACACAGTGAGTGTCCTGGCATCGCCTGTGAGTCTCTAGAGTGGCTGCAATCCAGAAGTTTATCACTTGCTCTCATATTTTTCTTCTAAAATATGTAATATAAAAGGACCGTTCTGTTTTCAAGCAATAGTAAAAATTGAGAATCTCCCAAGGCGTTCAGTGGAAAATAGCTGAGTGGTGCCACTAAGCAAAAAGCCACTGTCGAAAAGTCTGCGCTTTTGCAAGACAAAACCCTCTGAGAAGCTCCTGGCAACAGTATGCATGACCTTGTGCCACAGAAGTGTTATTGTCTCTGTAATGCTTTATTTTCTTTCTCAAGGGCTTATGCAAACTCCAGAAAACAGCACCATTAGAACATGCAAACCTCCCCTACATCGCTCTTTCAAAACACAGCTTGGCAACCTCATTCACGCATCAAGTTCAGGGATGTCAATGCCAAAATAACCCTCACTGTGAAGTGAAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa33618
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000026107 Essential Splice Site 866 1811 5 22
ENSDART00000078607 Essential Splice Site 829 1506 6 22
ENSDART00000131729 Essential Splice Site 866 1811 6 23
ENSDART00000137717 Essential Splice Site 866 1720 5 21

The following transcripts of ENSDARG00000021948 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 5 (position 30238601)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 28000390
GRCz11 5 28600543
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GTAAAGAACAACACCCGTGGACCCCCAGCCAGCAAGAACGTTGTCACAAG[T/A]AAGCAGCTGCCGACTGTAACTAAACTAGTCTGCTGTTTTTCAGAAACTAT
Long Flanking Sequence:
TTATGCAAACTCCAGAAAACAGCACCATTAGAACATGCAAACCTCCCCTACATCGCTCTTTCAAAACACAGCTTGGCAACCTCATTCACGCATCAAGTTCAGGGATGTCAATGCCAAAATAACCCTCACTGTGAAGTGAAACACTCATCCAAGCAGAATCATCTAAAAAACCAAAGCGTTGCCTCTCAGGACACACTCTTCCCCCTGTAGCTTGACTTTGTTTTTCTTGAAGTTGTTTCTTTGGTGTTCTTTTGTTAACCTAGAGAACCTCTGACCAGCAGATTTTGAGATTTAATATATTCTACAAATCAATTCACTGAAAAAAAAACTGTTTTTGAATGGCAGAAAGAAGAAGATGGAGAGATTTTGAACTCTCTCGCTCCTCCTGAGACCACCTTTGAGCAGTCTGGACTTGGACCTGGACAAGAGTATGAAGTTAAGCTTGAAGTCGTAAAGAACAACACCCGTGGACCCCCAGCCAGCAAGAACGTTGTCACAAG[T/A]AAGCAGCTGCCGACTGTAACTAAACTAGTCTGCTGTTTTTCAGAAACTATTTTAGACATTTTAAAGAGACAGGATGTCTTACCAGAAATGAGAAAGTTCAGTCAGCGGTTTACACAAATTAGCAGTTATTTTTTTATATTTTGAACCAGTGCTCAGTCCTGGCCTAGTTTATGTCCAACCTGACAAAACACGTTTGCTTGGAGGGTTTTAGTAAACCTGAAGCCATTGATTAGCTGGTTTTGATGTGTAGAAATTGAGCAGGAGCTGAGCTCTCGAGGACGATTGCTTTCAAGGATTGAACACCTCTAATTCAGTGACTAGCAATGTATTTTATAAGATTTTACATCTTTACCATGTGTTTTACTACACTTTATCAACTAAAACTTATAAGCCTACACAAAATGTCAGACATTAGGAGTGTTAATTTGACTGACTTACTGACTGACTGACTGACTGACTGACTGACTGACTGACTGACTGACTGACTGAGACAGACAGAC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa20438
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
G > T
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000026107 Essential Splice Site 955 1811 6 22
ENSDART00000078607 Essential Splice Site 918 1506 7 22
ENSDART00000131729 Essential Splice Site 955 1811 7 23
ENSDART00000137717 Essential Splice Site 955 1720 6 21

The following transcripts of ENSDARG00000021948 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 5 (position 30233510)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 27995299
GRCz11 5 28595452
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CCGCCGGGGAGAGATGAGCAGCTTCCCCATCTATGAGACCTTCACAACAG[G/T]TATGAACACTTTTTAAGAACTAGAAATGCTTCCAGGTCATCCAAAAATGT
Long Flanking Sequence:
GTAATAGTAATATGTATTATGTATTAAAAGTAATATGCGTCTTGCATAGCATAAATGTGTGTGCGTGGTTTTTTTAAATAAGCTATAGGGTAAATGAAGGTGATTGGCATGCATGGAGGTTTTTCCATCTAAAAGTATGCAGCAGCTGTTTTGAGCTCACCTGCTTTTCTATTCTGTGTAATTCTGTGTTTTCCCAGCTGTCTCACACTCTTCTCTCCTCTCATCTGCAGTGATTGATGCTCCTAGCCAGGTGGATGTGCGTGACGTGACGGACACAACAGCCCTGGTCACGTGGCTTCAGCCTGTCGCTCAGGTGGACGGCATCTCTGTTTCCTATGGCCCAAACACAGACTCCTCCGACAGGAACACAATCGAGCTTTCCTCCATAGAAACCCAGTACCATCTGGCTGAGCTGTCTCCTGACACTGAGTATGAGGTCTCTCTTATGGCCCGCCGGGGAGAGATGAGCAGCTTCCCCATCTATGAGACCTTCACAACAG[G/T]TATGAACACTTTTTAAGAACTAGAAATGCTTCCAGGTCATCCAAAAATGTATTCTGCTTAAGGCAATGCAATATAAGTGAATACAGTGAGTTGAAAGTTTAAAGGTCCAGTGAAGTGCTTTGATGTGCATTTTATTTTATGTTTATCTGACGTAATCTTAATTGAAAAATGAAGAGAGGGTCGGATATAGAGTAGCTCCTCCCCTTTAAAAAATAACAGCCAATAGTGTAATGTTTTTATCACAGCCGTGATAGAGTGGTTGAGCTCATCAACTCAAGTGCATCAACTGAAAAGCAAATGAGAAGTGTCTTGAAGGAGGCAGGGCATGTCAGATACTAGAGAGCGTTTAATTGGTCAAGATTTGATGAGAAACTAAGTTATGAGGAGACGTGAAAAAAAATTATGAGCTATTTATGCATATCTGACAAACTGTAAGCTTTGAATGTTCATATATAATGTTCATATATAATTATTATAATAATAATTATTATTATTATTAT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa1576
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000026107 Nonsense 990 1811 7 22
ENSDART00000078607 Nonsense 953 1506 8 22
ENSDART00000131729 Nonsense 990 1811 8 23
ENSDART00000137717 Nonsense 990 1720 7 21

The following transcripts of ENSDARG00000021948 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 5 (position 30230495)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 27992284
GRCz11 5 28592437
KASP Assay ID:
554-1519.1 (used for ordering genotyping assays)
KASP Sequence:
TAACTCTGGAGTGGAGAAACAGCAGAGCCAACGTCCTCAATTACCGTGTC[A/T]AATACGGCCCACTTTCTGGAGGGGAGCATGGAGAGCTGGTCTTCCCCAGC
Long Flanking Sequence:
GACTACTTTTCACACATATTTGAGTATGATTTACAACATATACTTTTACTCGCACTACATTTTTGGCCAAGTAATGATACTTTTTCTTGATTATGATTTTTCTGTACTCTTTCCTCCACTAATTTTAATTGATAAAGAGTGACAAAAGAAACACTTAAAAGTGCATTTTTGATGTTTTTTATACATTAGATTTAAAAAAAAATACTGAAAAGCCAAAAAACTCAAAATCTTAAATGTGACAGGTGCACGAAAAACAGTTTTTGTCTGTAGTTTCTAGCCTTCAGCAGGTGTGTTGTATACTTAGAGCCGCACTGAAGCAGTTTTGTTTGTCTTGCCTCTGAGGATAATTGTACGTTTACAGGAAGCACTTTCTTTCATCCGCATGTTGACGTGTTTTAGATCTGGATTCCCCAAAGCACCTCAAGGCAATTGAGCAGACAGATGAGAGCATAACTCTGGAGTGGAGAAACAGCAGAGCCAACGTCCTCAATTACCGTGTC[A/T]AATACGGCCCACTTTCTGGAGGGGAGCATGGAGAGCTGGTCTTCCCCAGCGGCCTGCAAGACACCACTCAGGCTAAGATCACTGGTGAGAGGCCAATCTGAATTACACAATAATCCCTCCTTTGGGATTACAAACCATGTTCAGTACAAACAGTCCATAAAGATTAAAAAAAAGGAAGGCGAAAGAGTAAAGTGAGGTTCTGCCGCAATGCGAACCAGACATTGGAGAAGTTTTCCGTTAAACCCATTTTATTTTATTACCTGAAAACGACCCTTCTGCATGTTCAAGACATTGTTTCCTCATCAAATTAGGAATGTGGTTCTCAGATTTGGCCTGAAATAATGGAAGTCTTTCTGAAAAATTATTGGAATTATTTATTGGAAACTCAGAGATTTAAACAGAGATTTAAACAGGCTAATCTAAAGGGATACTTCCCCCAAATGTTAAAATTCTGTCATCATTTAATCTCTTTTCACTTTTTCTGAAGCTTTTTACTTTCT
Associated Phenotype:
Normal
Stage Entity Quality Tag
Larval:Day 5
ZFS:0000037		 whole organism
ZFA:0001094		 quality
PATO:0000001		 normal
PATO:0000461

Mutation Details

Allele Name:
sa33617
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000026107 Essential Splice Site 1360 1811 13 22
ENSDART00000078607 Essential Splice Site 1232 1506 13 22
ENSDART00000131729 Essential Splice Site 1360 1811 14 23
ENSDART00000137717 Essential Splice Site 1269 1720 12 21

The following transcripts of ENSDARG00000021948 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 5 (position 30210879)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 27972668
GRCz11 5 28572821
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGTGTGTTAAGCGACGAGTAGCTGATTGCAGGTCTCTGTCTCCCCCTGCA[G/T]GCAGTCCTCTGACACTGAGAGTGGATGGAGGAGAGTCTCAAGCCATGCTC
Long Flanking Sequence:
TGTTTTTTGGCTTAATGCTAGTCTCTATTCACAATATAGATAAGTTCAAACTTGAATGAAAATTCATTCTCAGAAAGTGAGACTTGACTGTGTGGTTTTCTATGAATTTGGATGGCTGCCTCCTGGCACATCATTGATTTATTTGTACTTCCTCGGTTTATGATTTCTCATAAATTGTTTCTTATGTAATATATTGCATAAGTTGAGGCGGAAATTCTCCCAGACTGCTGTTTTGGCATCATAAATTGATCTATTCGAAAAGATGCCCCCCAAAGGTCTCATAGTGTCCTTTTGGCTTCTCTGTGATCTTTCCCGGTGTTTAGATTAGTTCCTTCTTCAGTAATGTGAAACTATCCGTCGATATCATCAATCAAACACTCTGTTTTATCCATCAGGACAGCATTCTTGTATTTCACCATTATCAATCAATTACAGAGAATGCTGCCCTCTAGTGTGTTAAGCGACGAGTAGCTGATTGCAGGTCTCTGTCTCCCCCTGCA[G/T]GCAGTCCTCTGACACTGAGAGTGGATGGAGGAGAGTCTCAAGCCATGCTCTCCAATCTGACCCCTGGTGTCACCTACCAGGTCACGGTCATCGCTGTTAAGGGCTTGGAGGAGAGTGAACCCGGATCTGAAAGGGTCACCACAGGTATAGTTCAACCTAATTTTATTATAATCTCATGAAATGTATGGTCAGGAAAGCTCTAACTAATATAATTATCACAGCAAGTGAATAATTATGACTATTGATTAAATAAGCAAAACTAATTAAGATAAAAATGATATATATAATTTTTCTCTTACAATATACATTTAGTCAGTCGAGTCCTATGTTTAGAGCTTTATACAATACAGATGGTTTGAGAAAATATTTAGAGTATTAAACAAGTACAAATCAATGTTAAAACTATATAAACACTTATTATTTTAAATGTAGGTTTAATTTTGTACTTTGGTTGTGTCCATTTTTATTATTTTTGTTTTAATAATATAGAAAAAAATCTT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa20437
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
A > G
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000026107 Essential Splice Site 1635 1811 None 22
ENSDART00000078607 Essential Splice Site None 1506 None 22
ENSDART00000131729 Essential Splice Site 1635 1811 None 23
ENSDART00000137717 Essential Splice Site 1544 1720 None 21

The following transcripts of ENSDARG00000021948 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 5 (position 30203144)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 27964933
GRCz11 5 28565086
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGCCTCTTCTATCAATAAAATAAAAAGTCAATACTATATCGTTGTACCTC[A/G]GGTGTTTGTGAGGCGGCAGAGTGGCAAAGTGGAGTTTTTCAGAAACTGGA
Long Flanking Sequence:
AGTTATAAAACATTATTTGTGGGGCTTGAACTTCACACACACACACTCTCTCTCTCTCTCTCTCTTTCTAGGGATATCAGACTTATTTTAAATCTTATAAAAAGGGTCATAATAGGTCCCCTTTAATGTTTGAATCCCCCAAGTTGCACGTTTTTCTTGTTTTTAAGCATGATAGTACGAAATTTAGTATTTCCACACAAGAACATAAAAACTATTGATAAGCCGTTCAAAAAATCAGTTGTTATGTGTGAACATGGCATAAATAAAAGGTGTACATTTTTCACTTTATTGTAAATAATGCAATAATATAAGGCCAGAATTGTATATTCATTTAATGTATGTATGTATTTTTAAATGAAACGATTATTTATTCTTTGTCAACTATAACTGTAATTGCAATCAGAATATGAGATGTTCTTGCCTCAAAAAATTTACTTTAGAGGCCATAAAAGCCTCTTCTATCAATAAAATAAAAAGTCAATACTATATCGTTGTACCTC[A/G]GGTGTTTGTGAGGCGGCAGAGTGGCAAAGTGGAGTTTTTCAGAAACTGGAAGAACTACACGGCAGGCTTCGGTGACCTGAATGATGAATTCTGGCTTGGTATGTTTAAATTTCTGCACACATCAAATTGCTATTATTGCTCTAGGAAGCACAGAGGCCTAGAGGTATAGTTGATACGGTGTGATTTTCGCAAATGTTGGTCTATAAATCTCATTGTGTGTGTCTGCAGGTCTATCTAACCTCCATAAAATCACCTCCTTTGGGCAGTATGAGCTGCGTGTGGACCTCAGAGATAAGGGCGAGTCTGCATACGCGCAATATGACAAGTTTTCAATCTCTGAACCACGTGCTCGCTACAAAGTCCATGTTGGAGGATACAGTGGCACAGCAGGTGAAGTCTTCACTTTACCTCTGTTTATAATAATTTTAAAGGGACAGTTCACCCAAATATTCTAATTCGGTTATCATTTACTCACCATCCACTCGTGACAAACCTGTTTG
Associated Phenotype:
Not determined