ZMP
si:ch211-93b22.1
Ensembl ID:
ZFIN ID:
Description:
Novel protein similar to vertebrate tachykinin receptor 1 (TACR1) [Source:UniProtKB/TrEMBL;Acc:A2BIP
Human Orthologue:
TACR1
Human Description:
tachykinin receptor 1 [Source:HGNC Symbol;Acc:11526]
Mouse Orthologue:
Tacr1
Mouse Description:
tachykinin receptor 1 Gene [Source:MGI Symbol;Acc:MGI:98475]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa20433 | Essential Splice Site | Available for shipment | Available now |
| sa31443 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa20433
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000051516 | Essential Splice Site | 201 | 413 | 2 | 6 |
| ENSDART00000141109 | None | None | 411 | None | 5 |
Genomic Location (Zv9):
Chromosome 5 (position 29821000)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 5 | 27576298 |
| GRCz11 | 5 | 28176451 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCTGCTACATCGACTGGCCCGAGTACACTCTCCTGGACTTCAAAACAATG[T/A]AAACATCTCTATTACACTCAAAAGAATACTTCTGCTGCTTGTTCAAACTA
Long Flanking Sequence:
TAGAAGAGTTACCTAACAGGCGAATTCTCCTCATCACTTCTGTTTGTTGTCAAAACTGACAGTTGGAGGGGCGTTAAATATCTTAACCACGCCCTATACCTCAAAATCATGAAATTTGGGAATTAAACATTTTTAAGATTTTAATTTTGCATTACAGGAGCATTCTTTTTCTTAATGACATAGATGATTTGTTCACCACAAAACTGTCAATGTCAAAATCATATAGATGACAAAACCATTTAAGCTTAAGTTGAAGCACAAAATACCTGAATATCCAACAGATGTAATGTGTGTCCTCCAACAGATATATGGCCATCATTCACCCCCTGCAGCAGAGGATGTCTGCGACACAGACAAAGGTGGTGATCGGGGTCATCTGGATCCTGGCTCTTCTGCTGGCCTTCCCCCAATACTACTACTCCGACACTGACCAGCTGCCCGGCAGGGTGGTCTGCTACATCGACTGGCCCGAGTACACTCTCCTGGACTTCAAAACAATG[T/A]AAACATCTCTATTACACTCAAAAGAATACTTCTGCTGCTTGTTCAAACTAATTATACAAAATTAGTTAAAACAACACAATTTTCAAGGTTTTTTTTCATTATTTTATGTTAAATCCACTTAATTTTTTTTAAAATAATTGATTTATGTTAGGACAACATGAAGTAATTGCGTGGAACCCAGCATTTTGACTTTGTATGATATGTTTGTTTTTTTATAATAACCCATGCCACCATTTGCAGATATTGGAAAAATATTTAGGTTGAGTATTTGTTTTTCAGATTTATGTCTGCAGGGTACAGAGAATTTCCTCTCCAGATCAAATTTCACCCATATTTTCGGATATTGCTGGAAATATTACCTTTATGACTCTCTAATTTGGAGTAATCAAAAATCAGCTCTGCTTGTTTTCTCCCCCCGTAAGTGTTTACTTATATAACGACAGAGAGGAGCTTCTTCATTACAAAGAAAACATTAAACACAGGAAAGTCGTGATCCTGAG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa31443
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000051516 | Nonsense | 306 | 413 | 4 | 6 |
| ENSDART00000141109 | Nonsense | 291 | 411 | 4 | 5 |
Genomic Location (Zv9):
Chromosome 5 (position 29857516)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 5 | 27612814 |
| GRCz11 | 5 | 28212967 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CAGCAGGTCTATCTGACTATCATGTGGCTGGCAATGAGCTCCACCATGTA[C/A]AACCCCATTATCTACTGCTGCCTCAATGACAGGTAATTTCACCTGAAAAT
Long Flanking Sequence:
CCCAGAAAACGTAATTAACTTCAGTTGAAGTTTGGCTTTTTGGTTAATGGCTCCTGCACATCACACAGTGTTAGCTCTCCAATTTCTGCATTGTATTGTCACTTTTGATGACAATATTTGCAAGCTGCTTTCTGGCGGAGGCTTAAAACCACCACCCGAAAGCTGTCGAAAAAAAATTGTTAAGGGACATTATGTCTGTCAGCATTCTGCCAACTTTGGTACAATGTGGGCAGCATGCGAAGCCCAGGAAATCAGCCCGAATGTCAAAAAGACGGTATTTATAGGCATAAAGCATAACCGTTATTGAAGATCTCTCTCTTCTTCCCCGACCTTCAGGTGGTGAAGATGATGATTGTGGTGGTGTGTACGTTCGCCGTCTGCTGGCTTCCCTATCATGTCTATTTCCTGATCCACCAATTCTACCCACACCTGTTCGAGCACACCTTCATTCAGCAGGTCTATCTGACTATCATGTGGCTGGCAATGAGCTCCACCATGTA[C/A]AACCCCATTATCTACTGCTGCCTCAATGACAGGTAATTTCACCTGAAAATACAGTAATTGGCACACACATCTAGCTCTTTCCTGACTCCAGCTGAAATTTGCTGTAATATCATTATTGTTCCAAATGATCCATCTTTGTACCAGAGAAAGCAGTCTAAAGCTGTGATGTATTTTTCTCTAATCTATCCCGGTTTCACTCGGATGTTGAAAATCCATCACAAAAGCCTTTGATAGACAACAAAGCTTTAATACACTAGTCAATTTCCACCTTTAAACCTATCAGCATCATCACATCTGTTCTTCTCCAACATTCCCGATCATCTCCTCAGGTTTCGAGCCGGATTTAAACAAGCTTTCCGCTGCTGTCCCTGCGTCCCTGAAGGGTCCTACGAGGGTCTAGAGCTCAAGTCCACTCGCTACCTTCAAACCCAGACAAGTCTGTACAGGGCCAGCCGCATGGAAACCAGTGTGTCCTGCGTGATGCAGCCTAGTGAAGACGG
Associated Phenotype:
Not determined