Busch Lab

ZMP

ptprb

Ensembl ID:
ENSDARG00000076624
ZFIN ID:
ZDB-GENE-101108-3
Description:
protein tyrosine phosphatase, receptor type, b [Source:RefSeq peptide;Acc:NP_001186063]
Human Orthologue:
PTPRB
Human Description:
protein tyrosine phosphatase, receptor type, B [Source:HGNC Symbol;Acc:9665]
Mouse Orthologue:
Ptprb
Mouse Description:
protein tyrosine phosphatase, receptor type, B Gene [Source:MGI Symbol;Acc:MGI:97809]

Alleles

There are 11 alleles of this gene:

Allele Name Consequence Status Availability
sa40334 Nonsense Mutation detected in F1 DNA Not yet available
sa30855 Nonsense Mutation detected in F1 DNA Not yet available
sa40333 Nonsense Mutation detected in F1 DNA Not yet available
sa30854 Nonsense Mutation detected in F1 DNA Not yet available
sa40332 Nonsense Mutation detected in F1 DNA Not yet available
sa17342 Nonsense Available for shipment Available now
sa44594 Nonsense Mutation detected in F1 DNA Not yet available
sa20312 Nonsense Available for shipment Available now
sa26358 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa33507 Essential Splice Site Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa40334
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000110037 None None 240 None 7
ENSDART00000127299 Nonsense 62 1892 2 30
Genomic Location (Zv9):
Chromosome 4 (position 59598279)
Other Location(s):
Assembly Chromosome Position
GRCz10 4 72913460
GRCz11 4 74367294
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CGCTGGATAACGCAAACGTGAAATGTCAATACACAGTTTCTGTCAAGGAC[A/T]GACACACAGATTCGAAAGGCTGCCGTCAAGACCGAGAACATTCCAAGTGC
Long Flanking Sequence:
AAATGCGTCTCCACTGGAATTCCAGAAGCAATGCTTCTGTAGACGTTTTGATTGAGGATATCCTTCAGAGACTGGATTGTTTTCCTTCGCACGTTCCTGATTGTCCTGCGCTAACGAGTGAAAGTTAGCCGTTCCCACGGAGGCGACTGGATTCGCAGAAAGTGCTTTAGGAGTCTCTGCGATACACACAGAGGAACGATGTGCATTTTGCCGTTGAATTTCTGTGAAGAGAAATAATTACGATGCTGAGAAATAAAGCCTTTCATGCCGCTGTTTGGGCAGCATGCGGAATACTGGTAAGTTTACTGTATATGCGACTGTGTATGCCACTTAATCAGTCCTCTAAAAGTTTTTCCAAATTTTTTTTTCAGAGTACCATGGTGGTGGACGCAACGGAATGTAGCATCGAAATCGTGAAAGTCATCTCTTCCACAGAGTCAATACGCCTCACGCTGGATAACGCAAACGTGAAATGTCAATACACAGTTTCTGTCAAGGAC[A/T]GACACACAGATTCGAAAGGCTGCCGTCAAGACCGAGAACATTCCAAGTGCCAAATCGAGAGTTTAGATCCCGGAACGTGGTATCACCTGGATGTAATATCAACGCTGGATGAAAAGCAACAGTCTCAACGCGCTGTCACCCTGCAGACTAGTAAGATTTCTGTTTATTCAATGGTCTACTTCAATGGTAGTTTCCAGACTGATCCAAGTAAAGTAGAGCATCACATATTTAATCTGACACTGTAAAAATAACAGAGGTGGAAAGAGTAATAAAATCTTCTACTCAAGAAAAAGTACTGTTACTTTCGAAAAACTTTACTTAAGTAAAAGTAAAGTTACACGTCTATAAATCGACTCAAGTAAAAGTAAAAATGTACTGATGAGTGAAGAGTAACTATTTCTCAAAAGGGAGAAGAGGGGTAACACTTTATAATAACTACACACTATAAATCATTTATTAAGCATTAGCATCTAGTGAACTCATCATCTGTTAAGCATTAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa30855
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000110037 None None 240 None 7
ENSDART00000127299 Nonsense 74 1892 2 30
ENSDART00000110037 None None 240 None 7
ENSDART00000127299 Nonsense 74 1892 2 30
Genomic Location (Zv9):
Chromosome 4 (position 59598243)
Other Location(s):
Assembly Chromosome Position
GRCz10 4 72913424
GRCz11 4 74367258
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTTCTGTCAAGGACAGACACACAGATTCGAAAGGCTGCCGTCAAGACCGA[G/T]AACATTCCAAGTGCCAAATCGAGAGTTTAGATCCCGGAACGTGGTATCAC
Long Flanking Sequence:
CTGTAGACGTTTTGATTGAGGATATCCTTCAGAGACTGGATTGTTTTCCTTCGCACGTTCCTGATTGTCCTGCGCTAACGAGTGAAAGTTAGCCGTTCCCACGGAGGCGACTGGATTCGCAGAAAGTGCTTTAGGAGTCTCTGCGATACACACAGAGGAACGATGTGCATTTTGCCGTTGAATTTCTGTGAAGAGAAATAATTACGATGCTGAGAAATAAAGCCTTTCATGCCGCTGTTTGGGCAGCATGCGGAATACTGGTAAGTTTACTGTATATGCGACTGTGTATGCCACTTAATCAGTCCTCTAAAAGTTTTTCCAAATTTTTTTTTCAGAGTACCATGGTGGTGGACGCAACGGAATGTAGCATCGAAATCGTGAAAGTCATCTCTTCCACAGAGTCAATACGCCTCACGCTGGATAACGCAAACGTGAAATGTCAATACACAGTTTCTGTCAAGGACAGACACACAGATTCGAAAGGCTGCCGTCAAGACCGA[G/T]AACATTCCAAGTGCCAAATCGAGAGTTTAGATCCCGGAACGTGGTATCACCTGGATGTAATATCAACGCTGGATGAAAAGCAACAGTCTCAACGCGCTGTCACCCTGCAGACTAGTAAGATTTCTGTTTATTCAATGGTCTACTTCAATGGTAGTTTCCAGACTGATCCAAGTAAAGTAGAGCATCACATATTTAATCTGACACTGTAAAAATAACAGAGGTGGAAAGAGTAATAAAATCTTCTACTCAAGAAAAAGTACTGTTACTTTCGAAAAACTTTACTTAAGTAAAAGTAAAGTTACACGTCTATAAATCGACTCAAGTAAAAGTAAAAATGTACTGATGAGTGAAGAGTAACTATTTCTCAAAAGGGAGAAGAGGGGTAACACTTTATAATAACTACACACTATAAATCATTTATTAAGCATTAGCATCTAGTGAACTCATCATCTGTTAAGCATTAACTCTACATTAATAAGCGTTAGTAAGCAGTTTATAGC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa40333
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000110037 None None 240 None 7
ENSDART00000127299 Nonsense 74 1892 2 30
ENSDART00000110037 None None 240 None 7
ENSDART00000127299 Nonsense 74 1892 2 30
Genomic Location (Zv9):
Chromosome 4 (position 59598243)
Other Location(s):
Assembly Chromosome Position
GRCz10 4 72913424
GRCz11 4 74367258
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTTCTGTCAAGGACAGACACACAGATTCGAAAGGCTGCCGTCAAGACCGA[G/T]AACATTCCAAGTGCCAAATCGAGAGTTTAGATCCCGGAACGTGGTATCAC
Long Flanking Sequence:
CTGTAGACGTTTTGATTGAGGATATCCTTCAGAGACTGGATTGTTTTCCTTCGCACGTTCCTGATTGTCCTGCGCTAACGAGTGAAAGTTAGCCGTTCCCACGGAGGCGACTGGATTCGCAGAAAGTGCTTTAGGAGTCTCTGCGATACACACAGAGGAACGATGTGCATTTTGCCGTTGAATTTCTGTGAAGAGAAATAATTACGATGCTGAGAAATAAAGCCTTTCATGCCGCTGTTTGGGCAGCATGCGGAATACTGGTAAGTTTACTGTATATGCGACTGTGTATGCCACTTAATCAGTCCTCTAAAAGTTTTTCCAAATTTTTTTTTCAGAGTACCATGGTGGTGGACGCAACGGAATGTAGCATCGAAATCGTGAAAGTCATCTCTTCCACAGAGTCAATACGCCTCACGCTGGATAACGCAAACGTGAAATGTCAATACACAGTTTCTGTCAAGGACAGACACACAGATTCGAAAGGCTGCCGTCAAGACCGA[G/T]AACATTCCAAGTGCCAAATCGAGAGTTTAGATCCCGGAACGTGGTATCACCTGGATGTAATATCAACGCTGGATGAAAAGCAACAGTCTCAACGCGCTGTCACCCTGCAGACTAGTAAGATTTCTGTTTATTCAATGGTCTACTTCAATGGTAGTTTCCAGACTGATCCAAGTAAAGTAGAGCATCACATATTTAATCTGACACTGTAAAAATAACAGAGGTGGAAAGAGTAATAAAATCTTCTACTCAAGAAAAAGTACTGTTACTTTCGAAAAACTTTACTTAAGTAAAAGTAAAGTTACACGTCTATAAATCGACTCAAGTAAAAGTAAAAATGTACTGATGAGTGAAGAGTAACTATTTCTCAAAAGGGAGAAGAGGGGTAACACTTTATAATAACTACACACTATAAATCATTTATTAAGCATTAGCATCTAGTGAACTCATCATCTGTTAAGCATTAACTCTACATTAATAAGCGTTAGTAAGCAGTTTATAGC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa30854
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000110037 None None 240 None 7
ENSDART00000127299 Nonsense 411 1892 6 30
ENSDART00000110037 None None 240 None 7
ENSDART00000127299 Nonsense 411 1892 6 30
Genomic Location (Zv9):
Chromosome 4 (position 59567694)
Other Location(s):
Assembly Chromosome Position
GRCz10 4 72882875
GRCz11 4 74336702
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTGAGCGCGCTGTGGGCTCATGCCGCTAGCTCATCGTCCCGCGATGGCTA[C/A]ATCATACAGCTTTTCCAGAGCAACACATCTACAGTTATTCAGACACGAAA
Long Flanking Sequence:
GGTGTAGGGAATGGTCAGCAGTGTATTTACAAATGTAATTACAGAAGTTAATTACAGATGTAATAACATACCGGTATTTAATCAAGCATAAGTACACAATAAATACATGTATTTACTGTGTACTTATAATATATACAATAAGTACATTGTAACAAACTATTTACTCCTGTGTAAGTACATATTAGTTAAGGCCACTTAATATGAAGTGGGACCACTAATGTAATAATTAACACATTAATATACTTTTAGTTAACATCAACAAAGACTAAGTAATGCTTAACAGATGTGTTGTTCATTTTAAATTCGTGTAAACTTAATATTTAAATTATTACAACCTGTATTGTGGTAAACCGAAGTCTGCACAATGTTATGATACCTGATTATGTATGGTCTTTTTCAGGTCTTCCCCCAGTGTCTCAGCTGCACGTCCGCCACTCAGACGAGACGTCTCTGAGCGCGCTGTGGGCTCATGCCGCTAGCTCATCGTCCCGCGATGGCTA[C/A]ATCATACAGCTTTTCCAGAGCAACACATCTACAGTTATTCAGACACGAAACTTGAGCCGGGACATGAGAGAGTGCACCTTCAATGTGCTCACACCGGGTCGCCTGTATGACATCACTGTAACCACCACCGCCAAGATCATCCGCAGTTCTGCCACACTGCAAGGCAGAACACGTAAGATTGTGTTTCGTTTTCTCAGCAGGACTGCTTATGTCTTTATTTTTGGATGAGAAATTCATAAAGGTAAATAATCAGTGCAAGGCACTTGAAAAATAAGAACTTGAACTGATTCTTTTTTAGTTTTTGCAAAATTTCTAGTTGTTTAACAATGAACTTTATCAAAAGACTGTAGCAAATTTGTTTTTTTCTTACGCTACACTAGAAAATATATCAACCCGGGCTCATTGTGGAAACGTAGTCCCGTGGACGTTTCTGGAGACTGCAGAATACGTCCCGGCGGGTACGTACGGCTGCAGTTTTTGTTTTCGCGAATCCGCGAGAG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa40332
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000110037 None None 240 None 7
ENSDART00000127299 Nonsense 411 1892 6 30
ENSDART00000110037 None None 240 None 7
ENSDART00000127299 Nonsense 411 1892 6 30
Genomic Location (Zv9):
Chromosome 4 (position 59567694)
Other Location(s):
Assembly Chromosome Position
GRCz10 4 72882875
GRCz11 4 74336702
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTGAGCGCGCTGTGGGCTCATGCCGCTAGCTCATCGTCCCGCGATGGCTA[C/A]ATCATACAGCTTTTCCAGAGCAACACATCTACAGTTATTCAGACACGAAA
Long Flanking Sequence:
GGTGTAGGGAATGGTCAGCAGTGTATTTACAAATGTAATTACAGAAGTTAATTACAGATGTAATAACATACCGGTATTTAATCAAGCATAAGTACACAATAAATACATGTATTTACTGTGTACTTATAATATATACAATAAGTACATTGTAACAAACTATTTACTCCTGTGTAAGTACATATTAGTTAAGGCCACTTAATATGAAGTGGGACCACTAATGTAATAATTAACACATTAATATACTTTTAGTTAACATCAACAAAGACTAAGTAATGCTTAACAGATGTGTTGTTCATTTTAAATTCGTGTAAACTTAATATTTAAATTATTACAACCTGTATTGTGGTAAACCGAAGTCTGCACAATGTTATGATACCTGATTATGTATGGTCTTTTTCAGGTCTTCCCCCAGTGTCTCAGCTGCACGTCCGCCACTCAGACGAGACGTCTCTGAGCGCGCTGTGGGCTCATGCCGCTAGCTCATCGTCCCGCGATGGCTA[C/A]ATCATACAGCTTTTCCAGAGCAACACATCTACAGTTATTCAGACACGAAACTTGAGCCGGGACATGAGAGAGTGCACCTTCAATGTGCTCACACCGGGTCGCCTGTATGACATCACTGTAACCACCACCGCCAAGATCATCCGCAGTTCTGCCACACTGCAAGGCAGAACACGTAAGATTGTGTTTCGTTTTCTCAGCAGGACTGCTTATGTCTTTATTTTTGGATGAGAAATTCATAAAGGTAAATAATCAGTGCAAGGCACTTGAAAAATAAGAACTTGAACTGATTCTTTTTTAGTTTTTGCAAAATTTCTAGTTGTTTAACAATGAACTTTATCAAAAGACTGTAGCAAATTTGTTTTTTTCTTACGCTACACTAGAAAATATATCAACCCGGGCTCATTGTGGAAACGTAGTCCCGTGGACGTTTCTGGAGACTGCAGAATACGTCCCGGCGGGTACGTACGGCTGCAGTTTTTGTTTTCGCGAATCCGCGAGAG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa17342
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000110037 None None 240 None 7
ENSDART00000127299 Nonsense 477 1892 7 30
Genomic Location (Zv9):
Chromosome 4 (position 59562598)
Other Location(s):
Assembly Chromosome Position
GRCz10 4 72877779
GRCz11 4 74331606
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GATTGTAATCTTGTGCTTTATTCTCAGWGCCTCTGAAGGTGAATCACCTG[A/T]AACTAAGCAACAAGGGGAGTACAGACAGTCTGAATGCAAGCTGGGAGAAA
Long Flanking Sequence:
CTTGACCAGATAAAAACAGCTAAGACCAGCTTGAGCAGCTAAAACCAGCTAAGACCAACCTGACCAATTAAGACCAGCTAAAAAGTTGCCCAAACCCCTCTAAAACCAGCCTGACAAATCAGCCATGACCAAACTGGGAAACCAGCTAAAACCAGCTTTGGTGATCAGCTAAAACCAGCCTGACAAGCTTTGGCTGGTTTAAGCTCGTTTTTTCAGAAGGGTAGACATTTAGCAAGCGACGGGTCCATATTTTCAATTTCTGTCCAGAGAGGTCATGTTTTGATCCTCGATTGGTCTCACGCAGTCAAGTGATGTGATTTCAGTGCAGTGACTTGCGAAAGCTGTCGCACGAGCTTGCGTTTCCAGTCTGACGCATTCGTGTGCGTATGAATGGAAGTCTATGGGGAGAAAAGTGCAGTGTGACCGCAGCTTTAGAAGCATAAAGAACCTGATTGTAATCTTGTGCTTTATTCTCAGAGCCTCTGAAGGTGAATCACCTG[A/T]AACTAAGCAACAAGGGGAGTACAGACAGTCTGAATGCAAGCTGGGAGAAACCGCTCGGGGATCTGGATTTCTATCACATGCTGCTGTTGAGGGACCAACAGACGGTCCACAACATTACAGCTTCTGCAAACACAACCTCAAGACTGCTTCCCTTCCTTAGACCCGGCGCTTTACACAAGATACTGGTGACCACAATCAGCGGATCACAAACATCCAAACTAGCTGAGGCTGAATGTCGGACAGGTAACATTCTGTGTAAATGTCGAATCCAGCTAAATAACCATCGTTCAAAAAGGATGCAAATCGAAATATATAGGTCCACACAGAATCTGTGCACATAGAAAACTTGAACCTGTCATGTAGTCTGTTTATATTCATATTAGGGGTGTAACGGTTCACAAAAATCTCCGTTCGGTTCGATACAGCACAGTGGTGTCACAGTTCAGCATGTTTTCGATACGGCAAAAAAAGAAAAGAGGATTTCTCTAATTTTAATTTAT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa44594
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000110037 None None 240 None 7
ENSDART00000127299 Nonsense 1039 1892 13 30
Genomic Location (Zv9):
Chromosome 4 (position 59541308)
Other Location(s):
Assembly Chromosome Position
GRCz10 4 72856489
GRCz11 4 74312736
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CAGCGGTGGGCTGGGTGGACGGGTATGAATTATATCTGTACGATCGAGAC[G/T]AGACCCTCCACTATCACACGACCCTGGGGAGTGATGCTCTGGGCTGGTCC
Long Flanking Sequence:
ACACGCCTTCAGTCAAGCGCTGACGCTGAAGCCCCGAGTGAACGGGGCATTAGGGTGCAAAAAAATCTAAATACTCCCCTTTTTAAAAAACGATTTCAAGATAAAAAGATTAGCCAAAAAGTGTAACTTTTTTTGTTTTGTGGTCCAGCATCACGACTCATGTTGACTTTAAATACATTTAATACCATTTCAAATATCTTTATCCTTGTATTTCTTCAAGAAATATTGACATTTTTGTCGGACATTTTGTCCAAAACATCAAGAGTGGAGTGCTTTGAGCTCTCTTTAATACATTTCAACTATAACAAACTGTATAAAGTAATCAAATACGTCTTTACCAGAAACAATGATGGCAGTTTTGTTTTGTTTCCACATCTCCAGGTCCATCCGCAGTGTCGGCACTTCACGTGTGCTCGAACACGAGCAGTGACCTTTCCTTCTGCTGGGCTTCAGCGGTGGGCTGGGTGGACGGGTATGAATTATATCTGTACGATCGAGAC[G/T]AGACCCTCCACTATCACACGACCCTGGGGAGTGATGCTCTGGGCTGGTCCTTTACACTCCTTCAGCCGGGAACACACTATAAGATGACGATCACCAGTAAGAGTGGGAAGCTGAGCAATCAGTCATCCGTATGGGCTCACACAGGTGAATGCTGAAGCTCAATAGCGTTCAGTATATTCCACGGTTTAAAAGCTTCACTGTATTTTAATTGATAATGTTAGTCGTCCTAAGTATTAGAAGTATCTGGGATTTATAGTTCAGATTTTCATTTGAGTTTGATGGCCCTGCTGAAAAATCCAGCTTAAACCAGCCTAGGCTAGTTGACTGGTTTTAGCTGGTCGACCAGGCTGGTTTTGGCTATTTCCAGGCTGGTTTCCAGCCATTTTCAGCCTAGTCTTAGCTGGTCAGGCTGGGAGATGACCATCAAAACAGCAAAATCCAGCTAAAACCAGCTTGACCAGCCTAGCCAAGCTGGGAGTGCAGCCAAAACCAGCTATATC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa20312
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000110037 None None 240 None 7
ENSDART00000127299 Nonsense 1043 1892 13 30
Genomic Location (Zv9):
Chromosome 4 (position 59541294)
Other Location(s):
Assembly Chromosome Position
GRCz10 4 72856475
GRCz11 4 74312722
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GTGGACGGGTATGAATTATATCTGTACGATCGAGACGAGACCCTCCACTA[T/A]CACACGACCCTGGGGAGTGATGCTCTGGGCTGGTCCTTTACACTCCTTCA
Long Flanking Sequence:
AAGCGCTGACGCTGAAGCCCCGAGTGAACGGGGCATTAGGGTGCAAAAAAATCTAAATACTCCCCTTTTTAAAAAACGATTTCAAGATAAAAAGATTAGCCAAAAAGTGTAACTTTTTTTGTTTTGTGGTCCAGCATCACGACTCATGTTGACTTTAAATACATTTAATACCATTTCAAATATCTTTATCCTTGTATTTCTTCAAGAAATATTGACATTTTTGTCGGACATTTTGTCCAAAACATCAAGAGTGGAGTGCTTTGAGCTCTCTTTAATACATTTCAACTATAACAAACTGTATAAAGTAATCAAATACGTCTTTACCAGAAACAATGATGGCAGTTTTGTTTTGTTTCCACATCTCCAGGTCCATCCGCAGTGTCGGCACTTCACGTGTGCTCGAACACGAGCAGTGACCTTTCCTTCTGCTGGGCTTCAGCGGTGGGCTGGGTGGACGGGTATGAATTATATCTGTACGATCGAGACGAGACCCTCCACTA[T/A]CACACGACCCTGGGGAGTGATGCTCTGGGCTGGTCCTTTACACTCCTTCAGCCGGGAACACACTATAAGATGACGATCACCAGTAAGAGTGGGAAGCTGAGCAATCAGTCATCCGTATGGGCTCACACAGGTGAATGCTGAAGCTCAATAGCGTTCAGTATATTCCACGGTTTAAAAGCTTCACTGTATTTTAATTGATAATGTTAGTCGTCCTAAGTATTAGAAGTATCTGGGATTTATAGTTCAGATTTTCATTTGAGTTTGATGGCCCTGCTGAAAAATCCAGCTTAAACCAGCCTAGGCTAGTTGACTGGTTTTAGCTGGTCGACCAGGCTGGTTTTGGCTATTTCCAGGCTGGTTTCCAGCCATTTTCAGCCTAGTCTTAGCTGGTCAGGCTGGGAGATGACCATCAAAACAGCAAAATCCAGCTAAAACCAGCTTGACCAGCCTAGCCAAGCTGGGAGTGCAGCCAAAACCAGCTATATCCAGCTTAAACCAGG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa26358
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000110037 None None 240 None 7
ENSDART00000127299 Essential Splice Site 1170 1892 15 30
Genomic Location (Zv9):
Chromosome 4 (position 59531589)
Other Location(s):
Assembly Chromosome Position
GRCz10 4 72846770
GRCz11 4 74303222
KASP Assay ID:
2259-5209.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CAAAGTACAACAGTTCTGAAACTAAACGACTCTCGTCATTATATCACCAC[A/T]GTCCCCGCAGCGCCATCGTCGGTGTCCGTCAGCTGCTCTGGCGGCTCAGT
Long Flanking Sequence:
AGAGTCGCTCAGTAGTTGGCACTGTCGCCTTACAGTAAGGTCGCTGGGTCGCTGGTTCGAGTCCCGGCTGGGCCAGCTGGCATTTCTGTGTGGAGTTTGTATGTTCTCCCCATGTTGGCGTGGGTTTCCTCCAGGTGCTTTGGTTTCCCCCACAGTCCAAAGACATGCGCTATAGGGGAATTAAACTAAATTAGCTGTAGTGTATGAGTGTGTGCGTGAATGAGTGTGTATGGGTGTTTACCAGTACTGGGTTGCAGCTGGAAGAGCATCCGTTAAGTAAAACATTTGCTTGAATAGTTGGCAGTTCATTCCACTGTGGCAATCCCTGATGAATAGAGACTAAACCGAAGGAAAATGAATGAATTTAAGCAGAGATGGATGTGTTTTCAGAGGAATTAAATAATTTTTAGACATTTTTGCCATAAAGAAGGACGTTTCTGTAGAATAACTCAAAGTACAACAGTTCTGAAACTAAACGACTCTCGTCATTATATCACCAC[A/T]GTCCCCGCAGCGCCATCGTCGGTGTCCGTCAGCTGCTCTGGCGGCTCAGTGGACATGAAGTGGCATGTCCCAGACACAGGAGACTATGAGGATTTCGAAGTGACGTGGTTTCCTCAGGACACACTGTACATTTCTCATCTCCGTCCCACTCAGCGGATCCTCGAAGGACTTCATCCAGGCCGGCTCTACAACATTAGCCTTCGCACGGTCAGTGGGAAGAGACACAGTCCTGTAACCTACAGCCGTCCCGTTTACCACACCATCAGAACCCGTGAGTACACCTCTATCAACATCGGTCACTTCTGAGCAGTTTGAATGAAATGCAATGAAAACAAAGCTGAAGTCAGGATTATTTGCCCTTAGAATTATATTTTTCGAAAAAAATATAGCTTAAAGGGGCTAATAATATTGACCTTAAAATGTTTTAAAGAAAATTAAAAACTGCTTTTATACTAGCCGAAATAAAGCAAATAAGACTTCAGAAGAAAAAATATTATCGG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa33507
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000110037 Essential Splice Site 28 240 None 7
ENSDART00000127299 Essential Splice Site 1646 1892 None 30
Genomic Location (Zv9):
Chromosome 4 (position 59513155)
Other Location(s):
Assembly Chromosome Position
GRCz10 4 72828336
GRCz11 4 74284751
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CGTCTGCTTGGTAACCGCAACAAAAACCGATACAACAATATACTTCCCTG[T/C]AAGTAGATTAACGGCAACATCTATCAGTTGGAATTCTTCATGTGTAGATT
Long Flanking Sequence:
TAGTGTATACTCCATCAGCTGTTTTAGTTTCTTTTGTGTTTTTGACTGTTTGGCGCCATCTTGTGTCTGAATAATGCGCAGGTTAGTGTATACTCCATCAGCTGTTTTAGTTTCTGTTGTGTTTTTGACTGTTTGGCGCCATCTTGTATCCGAATAATGCGCAGGTTAGTGTATACTCCATCAGCTGTTTTAGTTTCTGTCAGCTTCGCATTTTTGACTGATTGGTGGCTGTCGAGGTGGTTCGAAGTTCCCTGATGAGCCTGCATTATTCACCGGTTGTTATCTCAGAATTCTGACCGACCGACTGACCAATCAGAATCAAGTATTCTAGACAGCTGTGTTATAAATCTGGTTAATAGCATCTGCTATCATGATCATTGCATCAACCTCTGCCTGTATTTTAAAAAGGGCCTAAAGGACGTGGGACGGATCCAAACTCAAAATGCTGCACGTCTGCTTGGTAACCGCAACAAAAACCGATACAACAATATACTTCCCTG[T/C]AAGTAGATTAACGGCAACATCTATCAGTTGGAATTCTTCATGTGTAGATTTAAAGAAGTACTGATTTGTTGACCTGAAGTTTAATCCTGCTCATTAACATCCTTAATGATTAACTTTAGACGACTCCACGCGGGTGAGACTGTCCTGTCTGGAGGATGACCCCTGCTCAGACTACATCAACGCTAACTATATACCTGTGAGTTAAATACATGTTCAGTGGTTTGGTCACTTGCTAAAGACAGAATTTTTATAACCTTTTTTTTGTGTTGTTGTTGTTATACTGATTGAAAATGTCTTCACACAACTTAAATGTTGCAAATACAGTAGTCAACGTTCGAAAGATAGTCCAAAAATGATTGAACCCCCATTATTGTATTCGGTGTGAAATTTATATGTTGTTATCAATTTATTTTGATGGTTCCTTTCATATAGTGTTCATAGTTTATCTAAAAATTAAAATGACCCCCTAATTAACTCATCCTCAAGCCAGGCTCGGTGTG
Associated Phenotype:
Not determined