ZMP
si:ch211-132p20.4
Ensembl ID:
ZFIN ID:
Description:
Sodium-coupled neutral amino acid transporter 2 [Source:UniProtKB/Swiss-Prot;Acc:Q5SPB1]
Human Orthologue:
SLC38A2
Human Description:
solute carrier family 38, member 2 [Source:HGNC Symbol;Acc:13448]
Mouse Orthologue:
Slc38a2
Mouse Description:
solute carrier family 38, member 2 Gene [Source:MGI Symbol;Acc:MGI:1915010]
Alleles
There are 3 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa20172 | Nonsense | Available for shipment | Available now |
| sa805 | Splice Site, Nonsense | Available for shipment | Available now |
| sa869 | Splice Site, Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa20172
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000067445 | Nonsense | 72 | 504 | 3 | 15 |
| ENSDART00000146779 | Nonsense | 72 | 504 | 4 | 16 |
Genomic Location (Zv9):
Chromosome 4 (position 1461026)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 4 | 1752658 |
| GRCz11 | 4 | 1601971 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GTGGTGTCATGTGTGCAAATGACACGTAAATCTTGCTTTTATAGAGCCCT[G/T]GATCTGCGTCATTCGGGATGTCAGTGTTTAATTTGGGCAATGCCATCATG
Long Flanking Sequence:
CAAGAGAAAACTGCTGGTGATCTCAGTCAAAGTAATTGCATAATGGGTAATAATGCGAAGGTGTGTTCCCACAAGTGTCCAAGCTGAACCCAAATCCTCATGCGTTGTGCTTTTATATTGCAGAATGAACAAAGCCCCGGCACAGATGAGTCGCTTTAACATCGCTCCAGACATGGACAGCAGCAGTACAAACAGCAATGAATACACAAACTACCAGGACCATGCCTCAAAAGTCCCTCTCAATGGGTAAAACCTGCTTTATTTTCCTTCTTAAGTGACCTTTATACAAATCTCAACCTTCATCTAATCCACTGATGTGATTACAGGATTCAGTATAGTGATGTGGAAGCAGAAAGTCAGAACTTCCTGTCAGATCATCACTTGGGGAAGAAGAAATATGAGGCTGAATATGTAAGTGCTTCATTAGTTTGAGAGGCTGAATCAGATTCTGTGGTGTCATGTGTGCAAATGACACGTAAATCTTGCTTTTATAGAGCCCT[G/T]GATCTGCGTCATTCGGGATGTCAGTGTTTAATTTGGGCAATGCCATCATGGGAAGTGGAATCCTAGGACTGTCTTATGCTATGGCCAACACCGGCATCGCCATGTTTGTGTGAGTACTGATGGGATTCTGTGCTTGGGATGTTTTTTATGTCATCCATACAGGAGCTGAACAATATATTGCTGGTATTTATATTATATGCAATGTCAATGAGCAGTTTTCTATATTTTGTGATCTATGTTTTTATGTTTCCCCATTTATTTCTGCTTTTGAATTGCATTATGAGACCTTGATCTTTCTTTCAACAACGCTTAAACCTTTAAAAGTTAGAAAAAGTGACGTTTATGAACATTTCAATAGTTTAAAGGGATATATTTTGTTTCAAACACCTTGTAAAAACCTGCCAGTGCATTTACTGTTATTTTACAGACTTATTTATCTCTATATTATTATTTCAAACAACTAAAATGTCAATAAAGGTCACTTTGTTAAACTGTAGAGT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa805
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Splice Site, Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000067445 | Splice Site, Nonsense | 284 | 504 | 9 | 15 |
| ENSDART00000146779 | Splice Site, Nonsense | 284 | 504 | 10 | 16 |
Genomic Location (Zv9):
Chromosome 4 (position 1468101)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 4 | 1759733 |
| GRCz11 | 4 | 1609046 |
KASP Assay ID:
554-0710.1 (used for ordering genotyping assays)
KASP Sequence:
ACAGCACYGATGAAGAGTGCTGCAAACCCAAATACTTCATCTTCAACTCA[C/T]AGGTACAGCACTGGAGATSATGGAGACTTTTCACATGAGCAGAGATCMTC
Long Flanking Sequence:
TTTGATATGGCATAGTTTATGTTAATAATGATATAATAATGCTTTTTTATTATGTAATTTTAAACATGTATATAAATATACTACTACTAATAATAATCATAAGTATATATCTATATATTTGTGTATGTGTGTATGTGTGTGTGTTGAGTTGATCCTCATGGTTTTTGTCTTCTGCTTCAGGTTATCTGGGCTACACCAGTGGATTCTCCTTGTTGTGCATGGTGTTCTTCCTTATTGTGGTGAGTGTTGAGATACTCCCCGAATAATGCGGTGGTTTACCATAGTAAAAGATGTGCAAATGAAAGCGAGAGCTGCTGTTGTGAGTCTAATGAGCTGTTCCTCCTCCTTTTGTTCTGCAGGTGATCTACAAGAAGTTCCAGATCCCCTGTCCGCTGCCTGAAAACTTCATTAACATCACAGTGAACGTCTCTCAGCCGCCGCAGACCAACAACAGCACCGATGAAGAGTGCTGCAAACCCAAATACTTCATCTTCAACTCA[C/T]AGGTACAGCACTGGAGATCATGGAGACTTTTCACATGAGCAGAGATCCTCATAGTTGATATACTTAGATCACAGTGAATGTGAATGCGAATATTTGCTGAAATAATTAAAGAAAATGATGGTGTTATCAAGACTTTCAGAAAAAGGAAACAATAGTGTGAGACTGATAATGGCAGTTAGAAGAAAAAATATTGTCAGATTTACTGTCTTGGCCCCATAGATGCTGCATTAGAAACACCTCGCATAAGCGGTCATTCATTCTTGGTAATTTGACACAGAGATGATCTTAAATATACATAAATACATAGAAATGTTCATGCATTTGAAAAATATCTACATATTAAAAACTTTCAATGATTTAAGATGCTGATGACTGTTAAACACGTCTTGTGGAAGGGTCCATACTGTGTTTCCATGCTTGTGTTTGACTGAGACTAATGTGCTGATCTGTGTGACTCTGTAGACTGTGTATGCTGTGCCCATCCTGACTTTTGCCTTTGT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa869
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > T
Consequence:
Splice Site, Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000067445 | Splice Site, Nonsense | 345 | 504 | 11 | 15 |
| ENSDART00000146779 | Splice Site, Nonsense | 345 | 504 | 12 | 16 |
Genomic Location (Zv9):
Chromosome 4 (position 1469854)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 4 | 1761486 |
| GRCz11 | 4 | 1610799 |
KASP Assay ID:
554-0771.1 (used for ordering genotyping assays)
KASP Sequence:
TGTTTATTATGTATCTGCTGGCTGCGCTGTTTGGATACCTGACCTTCAAT[G/T]GTGAGCGWAACGCAGACACATGTCCACATCAGAGCRYGTTACGAAACCTC
Long Flanking Sequence:
GGTGCACAGGTATGTATTAGAGTGAAATGTGACATTTTGAATAATAACAACTTAACTATTAATACAAAAATAAAGTAAAAGTTACTATAATTGCCGCAATTGTTGTTGTAAAATTATAAATAAATAACATTATTACAAAAAATGTGCAATCTTTTTATTTTTAATTTTACAACAACAATAATAAAAAAAATGTATTCCCCGTTTGCATTAGTTGTTTTGTATTCAATCTTATAATTGTTATTTATTTAATTGGTATTCATTTATATGTATTTATTTTGTTTATTTATTTTTTTTAAAAAATTTAAAATCCTGTTTTTATATAAAAGTTAAATTGTAAAATTGATCCGGATGAAATGCATCAACCTCTGAAAGTAACTGTATCTTTCTCTTCTCTCTGCAGTCGCTCCAGGAGGAAGATGCAGAACGTTGCTAATGTGTCGTTTCTGGGAATGTTTATTATGTATCTGCTGGCTGCGCTGTTTGGATACCTGACCTTCAAT[G/T]GTGAGCGAAACGCAGACACATGTCCACATCAGAGCGCGTTACGAAACCTCTGTCTGATGCCAGTTTCAGAGCCGCACTGTTTGCTTTAATGGAGGTGTGTGTGTTAAAGGCCTGCGGATTGAGCCGGACCAAAGCCAGCTTTCAGTCTGATCTGTTTCGCAAGTTTTGGGAATAAATAAGGGGCGTTCAGCTGTTTGCCGCAGCAGGAACAGAACATCACATTTGATGTTTTTACTCTGTCCTGATAGATGGGAAAGGTTATGCAACAGAGGGATTTCTCAGACCAGGGAAAATAAACATTCTTGTGGGATCTGTTGTTTGATGTGTTAGACATAGTTTTATTAAAAGTAATAAAAGGTTTTTCTGTTTATTTGTTTGGATCAGTGCAACTAAAATAAAACTAAACAAAACATTATTGTTTCTTCAGAGAGAGACTGCTTTCAATGTAAATATTTAAAAACATGACATATTATATAATGCAAAATATATTTCAATATATT
Associated Phenotype:
Normal
| Stage | Entity | Quality | Tag |
|---|---|---|---|
| Larval:Day 5 ZFS:0000037 |
whole organism ZFA:0001094 |
quality PATO:0000001 |
normal PATO:0000461 |